RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 SIGLEC15Q6ZMC9 328 aa10.21□□□□□ -0.78
NEK3-210ENST00000620675 MIR17HGQ75NE6 70 aa10.21□□□□□ -0.78
NEK3-210ENST00000620675 OR8I2Q8N0Y5 310 aa10.21□□□□□ -0.78
NEK3-210ENST00000620675 STXBP6Q8NFX7 210 aa10.21□□□□□ -0.78
NEK3-210ENST00000620675 MS4A6AQ9H2W1 248 aa10.21□□□□□ -0.78
NEK3-210ENST00000620675 TSPAN4O14817 238 aa10.2□□□□□ -0.78
NEK3-210ENST00000620675 MRPS12O15235 138 aaKnown RBP10.2□□□□□ -0.78
NEK3-210ENST00000620675 JTBO76095 146 aa10.2□□□□□ -0.78
NEK3-210ENST00000620675 LCN12Q6JVE5 192 aa10.2□□□□□ -0.78
NEK3-210ENST00000620675 NARS2Q96I59 477 aaKnown RBP10.2□□□□□ -0.78
NEK3-210ENST00000620675 GPR61Q9BZJ8 451 aa10.2□□□□□ -0.78
NEK3-210ENST00000620675 TIMM9Q9Y5J7 89 aa10.2□□□□□ -0.78
NEK3-210ENST00000620675 ELOA3CA0A087WX78 387 aaPredicted RBP10.19□□□□□ -0.78
NEK3-210ENST00000620675 H3BTX0 84 aa10.19□□□□□ -0.78
NEK3-210ENST00000620675 PRB4P10163 310 aaPredicted RBP10.19□□□□□ -0.78
NEK3-210ENST00000620675 PXDC1Q5TGL8 231 aa10.19□□□□□ -0.78
NEK3-210ENST00000620675 SSX7Q7RTT5 188 aa10.19□□□□□ -0.78
NEK3-210ENST00000620675 AURKAIP1Q9NWT8 199 aaPredicted RBP10.19□□□□□ -0.78
NEK3-210ENST00000620675 HMGB3O15347 200 aaKnown RBP10.19□□□□□ -0.78
NEK3-210ENST00000620675 ZNF124Q15973 351 aa10.19□□□□□ -0.78
NEK3-210ENST00000620675 OR1L4Q8NGR5 311 aa10.19□□□□□ -0.78
NEK3-210ENST00000620675 OR2G3Q8NGZ4 309 aa10.19□□□□□ -0.78
NEK3-210ENST00000620675 DCANP1Q8TF63 244 aa10.19□□□□□ -0.78
NEK3-210ENST00000620675 GATAD1Q8WUU5 269 aa10.19□□□□□ -0.78
NEK3-210ENST00000620675 GRAMD2BQ96HH9 432 aa10.19□□□□□ -0.78
NEK3-210ENST00000620675 FAM167A-AS1Q96KT0 104 aa10.19□□□□□ -0.78
NEK3-210ENST00000620675 PFDN5Q99471 154 aa10.19□□□□□ -0.78
NEK3-210ENST00000620675 PSMG3Q9BT73 122 aaPredicted RBP10.19□□□□□ -0.78
NEK3-210ENST00000620675 TMEM231Q9H6L2 316 aa10.19□□□□□ -0.78
NEK3-210ENST00000620675 UBQLN2Q9UHD9 624 aa10.19□□□□□ -0.78
NEK3-210ENST00000620675 TGP01266 2768 aa10.18□□□□□ -0.78
NEK3-210ENST00000620675 PYYP10082 97 aa10.18□□□□□ -0.78
NEK3-210ENST00000620675 SPP1P10451 314 aa10.18□□□□□ -0.78
NEK3-210ENST00000620675 C1orf194Q5T5A4 169 aa10.18□□□□□ -0.78
NEK3-210ENST00000620675 RPP25LQ8N5L8 163 aaKnown RBP10.18□□□□□ -0.78
NEK3-210ENST00000620675 OR2K2Q8NGT1 345 aa10.18□□□□□ -0.78
NEK3-210ENST00000620675 SLC25A2Q9BXI2 301 aa10.18□□□□□ -0.78
NEK3-210ENST00000620675 TENM3Q9P273 2699 aa10.18□□□□□ -0.78
NEK3-210ENST00000620675 TRAV25A0A0B4J276 109 aa10.18□□□□□ -0.78
NEK3-210ENST00000620675 BMI1P35226 326 aa10.18□□□□□ -0.78
NEK3-210ENST00000620675 IGFL4Q6B9Z1 124 aa10.18□□□□□ -0.78
NEK3-210ENST00000620675 FAM122CQ6P4D5 195 aa10.18□□□□□ -0.78
NEK3-210ENST00000620675 Q8N1Y9 231 aa10.18□□□□□ -0.78
NEK3-210ENST00000620675 ZNF503Q96F45 646 aa10.18□□□□□ -0.78
NEK3-210ENST00000620675 SPAG8Q99932 426 aaPredicted RBP10.18□□□□□ -0.78
NEK3-210ENST00000620675 KCNIP2Q9NS61 270 aa10.18□□□□□ -0.78
NEK3-210ENST00000620675 RPRMQ9NS64 109 aa10.18□□□□□ -0.78
NEK3-210ENST00000620675 H3BQ15 152 aa10.17□□□□□ -0.78
NEK3-210ENST00000620675 K7EIL1 84 aa10.17□□□□□ -0.78
NEK3-210ENST00000620675 M6PRP20645 277 aa10.17□□□□□ -0.78
NEK3-210ENST00000620675 FHITP49789 147 aa10.17□□□□□ -0.78
NEK3-210ENST00000620675 DEFB1P60022 68 aa10.17□□□□□ -0.78
NEK3-210ENST00000620675 ODF3L2Q3SX64 289 aa10.17□□□□□ -0.78
NEK3-210ENST00000620675 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.17□□□□□ -0.78
NEK3-210ENST00000620675 OR10G4Q8NGN3 311 aa10.17□□□□□ -0.78
NEK3-210ENST00000620675 OR10G9Q8NGN4 311 aa10.17□□□□□ -0.78
NEK3-210ENST00000620675 OR10G7Q8NGN6 311 aa10.17□□□□□ -0.78
NEK3-210ENST00000620675 TMED6Q8WW62 240 aa10.17□□□□□ -0.78
NEK3-210ENST00000620675 GNPNAT1Q96EK6 184 aaPredicted RBP10.17□□□□□ -0.78
NEK3-210ENST00000620675 C19orf73Q9NVV2 129 aa10.17□□□□□ -0.78
NEK3-210ENST00000620675 FUT9Q9Y231 359 aa10.17□□□□□ -0.78
NEK3-210ENST00000620675 DNAH9Q9NYC9 4486 aa10.17□□□□□ -0.78
NEK3-210ENST00000620675 HELTA6NFD8 242 aa10.16□□□□□ -0.78
NEK3-210ENST00000620675 K7EQG2 157 aa10.16□□□□□ -0.78
NEK3-210ENST00000620675 CD81P60033 236 aa10.16□□□□□ -0.78
NEK3-210ENST00000620675 ZNF726P1Q15940 193 aa10.16□□□□□ -0.78
NEK3-210ENST00000620675 BAP18Q8IXM2 172 aa10.16□□□□□ -0.78
NEK3-210ENST00000620675 NRN1Q9NPD7 142 aa10.16□□□□□ -0.78
NEK3-210ENST00000620675 DNASE2O00115 360 aaPredicted RBP10.16□□□□□ -0.78
NEK3-210ENST00000620675 SOCS3O14543 225 aa10.16□□□□□ -0.78
NEK3-210ENST00000620675 DEFA6Q01524 100 aa10.16□□□□□ -0.78
NEK3-210ENST00000620675 ACOT6Q3I5F7 207 aaPredicted RBP10.16□□□□□ -0.78
NEK3-210ENST00000620675 STOML3Q8TAV4 291 aa10.16□□□□□ -0.78
NEK3-210ENST00000620675 PFDN2Q9UHV9 154 aa10.16□□□□□ -0.78
NEK3-210ENST00000620675 SLC17A3O00476 420 aa10.15□□□□□ -0.78
NEK3-210ENST00000620675 OR10J4P0C629 311 aa10.15□□□□□ -0.78
NEK3-210ENST00000620675 ZNF688P0C7X2 276 aa10.15□□□□□ -0.78
NEK3-210ENST00000620675 HLA-DMBP28068 263 aa10.15□□□□□ -0.78
NEK3-210ENST00000620675 SERF2P84101 59 aa10.15□□□□□ -0.78
NEK3-210ENST00000620675 APRG1Q8IVJ8 170 aa10.15□□□□□ -0.78
NEK3-210ENST00000620675 CITED4Q96RK1 184 aa10.15□□□□□ -0.78
NEK3-210ENST00000620675 IGLC2P0DOY2 106 aa10.14□□□□□ -0.79
NEK3-210ENST00000620675 TPT1P13693 172 aaKnown RBP10.14□□□□□ -0.79
NEK3-210ENST00000620675 RPL7P18124 248 aaKnown RBP10.14□□□□□ -0.79
NEK3-210ENST00000620675 GALR1P47211 349 aa10.14□□□□□ -0.79
NEK3-210ENST00000620675 DEFB125Q8N687 156 aa10.14□□□□□ -0.79
NEK3-210ENST00000620675 C20orf173Q96LM9 149 aa10.14□□□□□ -0.79
NEK3-210ENST00000620675 ZNF586Q9NXT0 402 aa10.14□□□□□ -0.79
NEK3-210ENST00000620675 TRAV8-2A0A0B4J237 113 aa10.14□□□□□ -0.79
NEK3-210ENST00000620675 RHOBP62745 196 aa10.14□□□□□ -0.79
NEK3-210ENST00000620675 TMEM41BQ5BJD5 291 aa10.14□□□□□ -0.79
NEK3-210ENST00000620675 BPIFA4PQ86YQ2 179 aa10.14□□□□□ -0.79
NEK3-210ENST00000620675 RNF182Q8N6D2 247 aa10.14□□□□□ -0.79
NEK3-210ENST00000620675 RAB24Q969Q5 203 aa10.14□□□□□ -0.79
NEK3-210ENST00000620675 MAP6D1Q9H9H5 199 aa10.14□□□□□ -0.79
NEK3-210ENST00000620675 OR4C46A6NHA9 309 aa10.13□□□□□ -0.79
NEK3-210ENST00000620675 ATF4P18848 351 aaPredicted RBP10.13□□□□□ -0.79
NEK3-210ENST00000620675 CDC34P49427 236 aaPredicted RBP10.13□□□□□ -0.79
NEK3-210ENST00000620675 PAFAH1B2P68402 229 aa10.13□□□□□ -0.79
NEK3-210ENST00000620675 SLC51BQ86UW2 128 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms