RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 HIST1H2BMQ99879 126 aa14.83□□□□□ -0.03
PSPC1-206ENST00000619300 ATG101Q9BSB4 218 aa14.83□□□□□ -0.03
PSPC1-206ENST00000619300 OSTCQ9NRP0 149 aa14.83□□□□□ -0.03
PSPC1-206ENST00000619300 GAR1Q9NY12 217 aaKnown RBP14.83□□□□□ -0.03
PSPC1-206ENST00000619300 IL36BQ9NZH7 164 aa14.83□□□□□ -0.03
PSPC1-206ENST00000619300 PITPNC1Q9UKF7 332 aa14.83□□□□□ -0.03
PSPC1-206ENST00000619300 V9GYV3 84 aa14.83□□□□□ -0.03
PSPC1-206ENST00000619300 USP9YO00507 2555 aaPredicted RBP14.83□□□□□ -0.03
PSPC1-206ENST00000619300 POLQO75417 2590 aa14.83□□□□□ -0.03
PSPC1-206ENST00000619300 MRPS12O15235 138 aaKnown RBP14.83□□□□□ -0.04
PSPC1-206ENST00000619300 S100A9P06702 114 aaKnown RBP14.83□□□□□ -0.04
PSPC1-206ENST00000619300 GPR183P32249 361 aa14.83□□□□□ -0.04
PSPC1-206ENST00000619300 FRZBQ92765 325 aa14.83□□□□□ -0.04
PSPC1-206ENST00000619300 CELSR1Q9NYQ6 3014 aa14.82□□□□□ -0.04
PSPC1-206ENST00000619300 PTPN13Q12923 2485 aa14.82□□□□□ -0.04
PSPC1-206ENST00000619300 IGF1P05019 195 aa14.82□□□□□ -0.04
PSPC1-206ENST00000619300 UBE2G1P62253 170 aa14.82□□□□□ -0.04
PSPC1-206ENST00000619300 FABP9Q0Z7S8 132 aa14.82□□□□□ -0.04
PSPC1-206ENST00000619300 EEF1AKMT3Q96AZ1 226 aa14.82□□□□□ -0.04
PSPC1-206ENST00000619300 RNASE7Q9H1E1 156 aaKnown RBP14.82□□□□□ -0.04
PSPC1-206ENST00000619300 TRBV7-1A0A0A6YYK4 115 aa14.82□□□□□ -0.04
PSPC1-206ENST00000619300 ZNF320A2RRD8 509 aa14.82□□□□□ -0.04
PSPC1-206ENST00000619300 TCRAP04437 139 aa14.82□□□□□ -0.04
PSPC1-206ENST00000619300 TRGC1P0CF51 173 aa14.82□□□□□ -0.04
PSPC1-206ENST00000619300 LURAP1LQ8IV03 231 aa14.82□□□□□ -0.04
PSPC1-206ENST00000619300 NHLRC2Q8NBF2 726 aa14.82□□□□□ -0.04
PSPC1-206ENST00000619300 TMEM190Q8WZ59 177 aa14.82□□□□□ -0.04
PSPC1-206ENST00000619300 C17orf77Q96MU5 243 aa14.82□□□□□ -0.04
PSPC1-206ENST00000619300 LINC00527Q9UJ94 153 aa14.82□□□□□ -0.04
PSPC1-206ENST00000619300 RPH3ALQ9UNE2 315 aa14.82□□□□□ -0.04
PSPC1-206ENST00000619300 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.81□□□□□ -0.041e-9■■□□□ 14.2
PSPC1-206ENST00000619300 IGHG2P01859 326 aa14.81□□□□□ -0.04
PSPC1-206ENST00000619300 ATP5G2Q06055 141 aa14.81□□□□□ -0.04
PSPC1-206ENST00000619300 LYPD1Q8N2G4 141 aa14.81□□□□□ -0.04
PSPC1-206ENST00000619300 EXOC3-AS1Q8N2X6 119 aa14.81□□□□□ -0.04
PSPC1-206ENST00000619300 CCDC140Q96MF4 163 aa14.81□□□□□ -0.04
PSPC1-206ENST00000619300 RABAC1Q9UI14 185 aa14.81□□□□□ -0.04
PSPC1-206ENST00000619300 CSMD2Q7Z408 3487 aa14.8□□□□□ -0.04
PSPC1-206ENST00000619300 NDUFA6P56556 154 aa14.8□□□□□ -0.04
PSPC1-206ENST00000619300 Q5PR19 223 aa14.8□□□□□ -0.04
PSPC1-206ENST00000619300 CLEC19AQ6UXS0 136 aa14.8□□□□□ -0.04
PSPC1-206ENST00000619300 ZNF414Q96IQ9 312 aa14.8□□□□□ -0.04
PSPC1-206ENST00000619300 TRAV9-1A0A075B6T8 112 aa14.8□□□□□ -0.04
PSPC1-206ENST00000619300 BMPR1BO00238 502 aa14.8□□□□□ -0.04
PSPC1-206ENST00000619300 IBA57Q5T440 356 aaKnown RBP14.8□□□□□ -0.04
PSPC1-206ENST00000619300 TOMM20LQ6UXN7 152 aa14.8□□□□□ -0.04
PSPC1-206ENST00000619300 CMTM2Q8TAZ6 248 aa14.8□□□□□ -0.04
PSPC1-206ENST00000619300 FMC1Q96HJ9 113 aa14.8□□□□□ -0.04
PSPC1-206ENST00000619300 IGHV4-31P0DP07 118 aa14.79□□□□□ -0.04
PSPC1-206ENST00000619300 S100A7P31151 101 aa14.79□□□□□ -0.04
PSPC1-206ENST00000619300 BLCAPP62952 87 aa14.79□□□□□ -0.04
PSPC1-206ENST00000619300 RPEL1Q2QD12 228 aa14.79□□□□□ -0.04
PSPC1-206ENST00000619300 SMIM12Q96EX1 92 aa14.79□□□□□ -0.04
PSPC1-206ENST00000619300 SGK494Q96LW2 274 aa14.79□□□□□ -0.04
PSPC1-206ENST00000619300 GPR82Q96P67 336 aa14.79□□□□□ -0.04
PSPC1-206ENST00000619300 IGHV3-35A0A0C4DH35 117 aa14.78□□□□□ -0.04
PSPC1-206ENST00000619300 FAM223BA6NKX1 122 aa14.78□□□□□ -0.04
PSPC1-206ENST00000619300 SIGLEC15Q6ZMC9 328 aa14.78□□□□□ -0.04
PSPC1-206ENST00000619300 FAM223AQ8IWN6 122 aa14.78□□□□□ -0.04
PSPC1-206ENST00000619300 DEFB112Q30KQ8 113 aa14.78□□□□□ -0.04
PSPC1-206ENST00000619300 ATP6V0BQ99437 205 aa14.78□□□□□ -0.04
PSPC1-206ENST00000619300 GNB4Q9HAV0 340 aa14.78□□□□□ -0.04
PSPC1-206ENST00000619300 RPL7P18124 248 aaKnown RBP14.77□□□□□ -0.04
PSPC1-206ENST00000619300 HOXA5P20719 270 aa14.77□□□□□ -0.04
PSPC1-206ENST00000619300 PDE6HQ13956 83 aa14.77□□□□□ -0.04
PSPC1-206ENST00000619300 ACTL10Q5JWF8 245 aa14.77□□□□□ -0.04
PSPC1-206ENST00000619300 FAM231DQ6ZW35 169 aa14.77□□□□□ -0.04
PSPC1-206ENST00000619300 ZFAND3Q9H8U3 227 aa14.77□□□□□ -0.04
PSPC1-206ENST00000619300 CHD6Q8TD26 2715 aa14.77□□□□□ -0.05
PSPC1-206ENST00000619300 BRI3O95415 125 aa14.76□□□□□ -0.05
PSPC1-206ENST00000619300 LTAP01374 205 aa14.76□□□□□ -0.05
PSPC1-206ENST00000619300 TRGV3P03979 118 aa14.76□□□□□ -0.05
PSPC1-206ENST00000619300 PPIFP30405 207 aaKnown RBP14.76□□□□□ -0.05
PSPC1-206ENST00000619300 MLST8Q9BVC4 326 aa14.76□□□□□ -0.05
PSPC1-206ENST00000619300 NAV2Q8IVL1 2488 aa14.76□□□□□ -0.05
PSPC1-206ENST00000619300 IGHV3OR16-8A0A075B7F1 116 aa14.76□□□□□ -0.05
PSPC1-206ENST00000619300 ZNF705GA8MUZ8 300 aaPredicted RBP14.76□□□□□ -0.05
PSPC1-206ENST00000619300 RPL15P61313 204 aaKnown RBP14.76□□□□□ -0.05
PSPC1-206ENST00000619300 OR8I2Q8N0Y5 310 aa14.76□□□□□ -0.05
PSPC1-206ENST00000619300 MBD6Q96DN6 1003 aa14.76□□□□□ -0.05
PSPC1-206ENST00000619300 NOL4LQ96MY1 436 aaPredicted RBP14.76□□□□□ -0.05
PSPC1-206ENST00000619300 SERTAD4Q9NUC0 356 aa14.76□□□□□ -0.05
PSPC1-206ENST00000619300 ABCA12Q86UK0 2595 aa14.76□□□□□ -0.05
PSPC1-206ENST00000619300 PLA2G2AP14555 144 aa14.75□□□□□ -0.05
PSPC1-206ENST00000619300 PRSS57Q6UWY2 283 aa14.75□□□□□ -0.05
PSPC1-206ENST00000619300 Q6ZS46 218 aa14.75□□□□□ -0.05
PSPC1-206ENST00000619300 GOLT1AQ6ZVE7 132 aa14.75□□□□□ -0.05
PSPC1-206ENST00000619300 H3BUA1 57 aa14.75□□□□□ -0.05
PSPC1-206ENST00000619300 IGHV4-59P01825 116 aa14.75□□□□□ -0.05
PSPC1-206ENST00000619300 NUDT10Q8NFP7 164 aa14.75□□□□□ -0.05
PSPC1-206ENST00000619300 NUDT11Q96G61 164 aa14.75□□□□□ -0.05
PSPC1-206ENST00000619300 Q96MF0 132 aa14.75□□□□□ -0.05
PSPC1-206ENST00000619300 ZMAT5Q9UDW3 170 aaKnown RBP14.75□□□□□ -0.05
PSPC1-206ENST00000619300 SMIM27A0A1W2PRY6 76 aa14.74□□□□□ -0.05
PSPC1-206ENST00000619300 J3QKU1 62 aa14.74□□□□□ -0.05
PSPC1-206ENST00000619300 IGLV2-11P01706 119 aa14.74□□□□□ -0.05
PSPC1-206ENST00000619300 RELQ04864 619 aaPredicted RBP14.74□□□□□ -0.05
PSPC1-206ENST00000619300 TRAPPC1Q9Y5R8 145 aa14.74□□□□□ -0.05
PSPC1-206ENST00000619300 GATCO43716 136 aaKnown RBP14.73□□□□□ -0.05
PSPC1-206ENST00000619300 FSHBP01225 129 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms