RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 RASL11AQ6T310 242 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 C19orf35Q6ZS72 473 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 SLC16A13Q7RTY0 426 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 PPP1R27Q86WC6 154 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 LINC00469Q8N7U9 141 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 TEX45Q8NA69 505 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 STXBP6Q8NFX7 210 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 OR10D4PQ8NGN7 298 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 OR1P1Q8NH06 330 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 OR5B3Q8NH48 314 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 OR4X1Q8NH49 305 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 OR4A5Q8NH83 315 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 MYOZ3Q8TDC0 251 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 C4orf3Q8WVX3 66 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 FRZBQ92765 325 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 SMIM12Q96EX1 92 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 RHOVQ96L33 236 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 CITED2Q99967 270 aaPredicted RBP4.08□□□□□ -1.76
SHMT1-211ENST00000618902 SRSF8Q9BRL6 282 aaKnown RBP4.08□□□□□ -1.76
SHMT1-211ENST00000618902 HEYLQ9NQ87 328 aaPredicted RBP4.08□□□□□ -1.76
SHMT1-211ENST00000618902 FOXA2Q9Y261 457 aaPredicted RBP4.08□□□□□ -1.76
SHMT1-211ENST00000618902 URGCP-MRPS24S4R325 110 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 DNAH7Q8WXX0 4024 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 A0A1B0GV50 99 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 C15orf62A8K5M9 175 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 TEX22C9J3V5 150 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 H3BP45 60 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 UPK2O00526 184 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 PAGE4O60829 102 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 YIF1AO95070 293 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 REG1AP05451 166 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 OR10J4P0C629 311 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 APELAP0DMC3 54 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 ESDP10768 282 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 CNN1P51911 297 aaKnown RBP4.07□□□□□ -1.76
SHMT1-211ENST00000618902 GNB1P62873 340 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 EGFEM1PQ0D2K5 195 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 FXYD3Q14802 87 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 PLGLAQ15195 96 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 ECSCRQ19T08 205 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 VMA21Q3ZAQ7 101 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 C2orf83Q53S99 150 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 ACTL10Q5JWF8 245 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 WDR73Q6P4I2 378 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 TMEM144Q7Z5S9 345 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 LINC01551Q86U37 167 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 TMEM167AQ8TBQ9 72 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 ARPC1AQ92747 370 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 C11orf52Q96A22 123 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 USMG5Q96IX5 58 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 ATP6V0BQ99437 205 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 QTRT1Q9BXR0 403 aaKnown RBP4.07□□□□□ -1.76
SHMT1-211ENST00000618902 MRPL32Q9BYC8 188 aaKnown RBP4.07□□□□□ -1.76
SHMT1-211ENST00000618902 TMEM14BQ9NUH8 114 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 TMEM140Q9NV12 185 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 BET1LQ9NYM9 111 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 SLC45A2Q9UMX9 530 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 LSM4Q9Y4Z0 139 aaKnown RBP4.07□□□□□ -1.76
SHMT1-211ENST00000618902 TRAPPC1Q9Y5R8 145 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 PXMP4Q9Y6I8 212 aa4.07□□□□□ -1.76
SHMT1-211ENST00000618902 TRAV41A0A0B4J266 112 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 A0A1W2PN81 502 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 A0A1W2PRE2 83 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 IGLC7A0M8Q6 106 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 XKRY2A2RUG3 117 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 C15orf61A6NNL5 157 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 LINC00587B1AMM8 73 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 CCL24O00175 119 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 ACTL6BO94805 426 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 FABP4P15090 132 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 RAB4AP20338 218 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 DDTP30046 118 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 OR10J1P30954 320 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 CHRNA7P36544 502 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 RAB9AP51151 201 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 ELLP55199 621 aaPredicted RBP4.06□□□□□ -1.76
SHMT1-211ENST00000618902 TAS2R60P59551 318 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 SELENOTP62341 195 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 ERHP84090 104 aaKnown RBP4.06□□□□□ -1.76
SHMT1-211ENST00000618902 Q0VG73 95 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 FHL3Q13643 280 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 TNXAQ16473 311 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 KLK9Q2XQG4 91 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 BEAN1Q3B7T3 259 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 NSUN5P1Q3KNT7 163 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 CST9LP1Q5W188 147 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 ETFRF1Q6IPR1 90 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 ZNF343Q6P1L6 599 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 ACSM6Q6P461 480 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 S100A7AQ86SG5 101 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 MMD2Q8IY49 270 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 OR5T1Q8NG75 326 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 OR10G8Q8NGN5 311 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 OR1L8Q8NGR8 309 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 FAM110DQ8TAY7 271 aaPredicted RBP4.06□□□□□ -1.76
SHMT1-211ENST00000618902 GATAD1Q8WUU5 269 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 SRSF12Q8WXF0 261 aaKnown RBP4.06□□□□□ -1.76
SHMT1-211ENST00000618902 SFRP2Q96HF1 295 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 HIST1H2BLQ99880 126 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 GNB1LQ9BYB4 327 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms