RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 ERG28Q9UKR5 140 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 MAP3K4Q9Y6R4 1608 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 PTPRGP23470 1445 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 PHLPP1O60346 1717 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 SHANK3Q9BYB0 1731 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 MED23Q9ULK4 1368 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 NUP98P52948 1817 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 FOCADQ5VW36 1801 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 SCN9AQ15858 1988 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 CAMSAP2Q08AD1 1489 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 NCKAP5O14513 1909 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 ARRDC5A6NEK1 342 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 LY6LH3BQJ8 138 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 K7ERU9 68 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 UBFD1O14562 309 aaKnown RBP1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 UCHL1P09936 223 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 EVI2AP22794 236 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 XCL1P47992 114 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 SUPT4H1P63272 117 aaKnown RBP1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 FOXF1Q12946 379 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 GLYATL3Q5SZD4 288 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 SOSTDC1Q6X4U4 206 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 LINC00305Q7Z4B0 112 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 LRRC28Q86X40 367 aaPredicted RBP1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 OR10P1Q8NGE3 313 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 SCGB3A1Q96QR1 104 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 C12orf57Q99622 126 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 HIST1H2BLQ99880 126 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 LXNQ9BS40 222 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 PRADC1Q9BSG0 188 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 ADAT1Q9BUB4 502 aaKnown RBP1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 CBLN4Q9NTU7 201 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 OR5AC2Q9NZP5 309 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 EPDR1Q9UM22 224 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 TNFSF18Q9UNG2 199 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 BAIAP2Q9UQB8 552 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 HEY1Q9Y5J3 304 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 MINOS1-NBL1R4GNA1 71 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 OVOS2A0A0J9YW53 1432 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 OVOS2Q6IE36 1432 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 DNMBPQ6XZF7 1577 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 FANCMQ8IYD8 2048 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 TOPBP1Q92547 1522 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 TANC2Q9HCD6 1990 aa1.45□□□□□ -2.18
SCAMP1-205ENST00000614488 STRCQ7RTU9 1775 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 PTPRMP28827 1452 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 TEX14Q8IWB6 1497 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 MED1Q15648 1581 aaPredicted RBP1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 MROH2BQ7Z745 1585 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 IGHV3-15A0A0B4J1V0 119 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 IGHV1-58A0A0C4DH39 117 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 A0A0J9YW62 118 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 C11orf86A6NJI1 115 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 NDUFB3O43676 98 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 TPST1O60507 370 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 CREBL2O60519 120 aaPredicted RBP1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 GGCTO75223 188 aaKnown RBP1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 SMIM24O75264 130 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 IGF2P01344 180 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 LINC00694P0DN24 101 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 GZMBP10144 247 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 ZNF25P17030 456 aaPredicted RBP1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 S100PP25815 95 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 NDUFA6P56556 154 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 NCS1P62166 190 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 RPS25P62851 125 aaKnown RBP1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 HBBP68871 147 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 WHAMMP3Q1A5X7 153 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 PDZD9Q8IXQ8 264 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 C10orf126Q8N4M7 172 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 SIGLECL1Q8N7X8 197 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 SLC30A7Q8NEW0 376 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 C1orf54Q8WWF1 131 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 ARL11Q969Q4 196 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 GGACTQ9BVM4 153 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 NPCDR1Q9BY65 106 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 TCEAL2Q9H3H9 227 aaPredicted RBP1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 NIT2Q9NQR4 276 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 HELZ2Q9BYK8 2649 aaKnown RBP1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 MYH6P13533 1939 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 DOCK10Q96BY6 2186 aa1.44□□□□□ -2.18
SCAMP1-205ENST00000614488 A2MP01023 1474 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 CPAMD8Q8IZJ3 1885 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 GBF1Q92538 1859 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 BCORL1Q5H9F3 1711 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 SLX4Q8IY92 1834 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 TRAV13-1A0A0B4J241 112 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 H3BMG7 143 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 H3BPC8 53 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 J3QR89 54 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 SLC22A1O15245 554 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 IGLC6P0CF74 106 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 ZNF728P0DKX0 622 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 CRYGAP11844 174 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 RELAQ04206 551 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 HES1Q14469 280 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 KHDC3LQ587J8 217 aa1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 EIF5AL1Q6IS14 154 aaKnown RBP1.43□□□□□ -2.18
SCAMP1-205ENST00000614488 C22orf39Q6P5X5 142 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms