RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 A0A1W2PRE2 83 aa8.93□□□□□ -0.98
ZNF558-207ENST00000601372 FOXL1Q12952 345 aa8.92□□□□□ -0.98
ZNF558-207ENST00000601372 SPRNQ5BIV9 151 aa8.92□□□□□ -0.98
ZNF558-207ENST00000601372 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.92□□□□□ -0.98
ZNF558-207ENST00000601372 J3QR89 54 aa8.92□□□□□ -0.98
ZNF558-207ENST00000601372 CNTFRP26992 372 aa8.92□□□□□ -0.98
ZNF558-207ENST00000601372 LRP4O75096 1905 aa8.92□□□□□ -0.98
ZNF558-207ENST00000601372 TMEM167AQ8TBQ9 72 aa8.92□□□□□ -0.98
ZNF558-207ENST00000601372 FAM159AQ6UWV7 190 aa8.92□□□□□ -0.98
ZNF558-207ENST00000601372 ZNF664Q8N3J9 261 aa8.92□□□□□ -0.98
ZNF558-207ENST00000601372 IGKV2-40A0A087WW87 121 aaPredicted RBP8.92□□□□□ -0.98
ZNF558-207ENST00000601372 IGKV2D-40P01614 121 aaPredicted RBP8.92□□□□□ -0.98
ZNF558-207ENST00000601372 RPS20P60866 119 aaKnown RBP8.92□□□□□ -0.98
ZNF558-207ENST00000601372 PRSS8Q16651 343 aa8.92□□□□□ -0.98
ZNF558-207ENST00000601372 KLF17Q5JT82 389 aaPredicted RBP8.92□□□□□ -0.98
ZNF558-207ENST00000601372 EVI2AP22794 236 aa8.92□□□□□ -0.98
ZNF558-207ENST00000601372 RNASE4P34096 147 aaKnown RBP8.92□□□□□ -0.98
ZNF558-207ENST00000601372 ZNF134P52741 427 aa8.92□□□□□ -0.98
ZNF558-207ENST00000601372 TEX36Q5VZQ5 186 aa8.92□□□□□ -0.98
ZNF558-207ENST00000601372 NBASA2RRP1 2371 aa8.91□□□□□ -0.98
ZNF558-207ENST00000601372 H7C2G1 150 aa8.91□□□□□ -0.98
ZNF558-207ENST00000601372 FAM74A4Q5TZK3 123 aa8.91□□□□□ -0.98
ZNF558-207ENST00000601372 CDPF1Q6NVV7 123 aa8.91□□□□□ -0.98
ZNF558-207ENST00000601372 RNF125Q96EQ8 232 aa8.91□□□□□ -0.98
ZNF558-207ENST00000601372 IGFL4Q6B9Z1 124 aa8.91□□□□□ -0.98
ZNF558-207ENST00000601372 BEND2Q8NDZ0 799 aa8.91□□□□□ -0.98
ZNF558-207ENST00000601372 WFDC12Q8WWY7 111 aa8.91□□□□□ -0.98
ZNF558-207ENST00000601372 CACNA1DQ01668 2161 aa8.91□□□□□ -0.98
ZNF558-207ENST00000601372 RPL35AP18077 110 aaKnown RBP8.91□□□□□ -0.98
ZNF558-207ENST00000601372 HERVK_113P61574 105 aa8.91□□□□□ -0.98
ZNF558-207ENST00000601372 C17orf58Q2M2W7 97 aa8.91□□□□□ -0.98
ZNF558-207ENST00000601372 FAM120AOSQ5T036 256 aa8.91□□□□□ -0.98
ZNF558-207ENST00000601372 NUP35Q8NFH5 326 aa8.91□□□□□ -0.98
ZNF558-207ENST00000601372 M0R381 172 aa8.91□□□□□ -0.98
ZNF558-207ENST00000601372 IGHV2-70P01814 119 aa8.91□□□□□ -0.98
ZNF558-207ENST00000601372 PSG1P11464 419 aa8.91□□□□□ -0.98
ZNF558-207ENST00000601372 LOXP28300 417 aaPredicted RBP8.91□□□□□ -0.98
ZNF558-207ENST00000601372 RPL15P61313 204 aaKnown RBP8.91□□□□□ -0.98
ZNF558-207ENST00000601372 DEFB112Q30KQ8 113 aa8.91□□□□□ -0.98
ZNF558-207ENST00000601372 ZNF114Q8NC26 417 aa8.91□□□□□ -0.98
ZNF558-207ENST00000601372 PRDM13Q9H4Q3 707 aa8.91□□□□□ -0.98
ZNF558-207ENST00000601372 ABCA4P78363 2273 aa8.91□□□□□ -0.98
ZNF558-207ENST00000601372 PMS2P5A8MQ11 134 aa8.9□□□□□ -0.98
ZNF558-207ENST00000601372 ZNF414Q96IQ9 312 aa8.9□□□□□ -0.98
ZNF558-207ENST00000601372 HIST1H4GQ99525 98 aa8.9□□□□□ -0.98
ZNF558-207ENST00000601372 HOXB4P17483 251 aaPredicted RBP8.9□□□□□ -0.98
ZNF558-207ENST00000601372 ERVK11-1P61568 191 aa8.9□□□□□ -0.98
ZNF558-207ENST00000601372 TSKUQ8WUA8 353 aa8.9□□□□□ -0.98
ZNF558-207ENST00000601372 RNASE2P10153 161 aaKnown RBP8.9□□□□□ -0.98
ZNF558-207ENST00000601372 MCRIP2Q9BUT9 160 aaKnown RBP8.9□□□□□ -0.98
ZNF558-207ENST00000601372 AREGP15514 252 aa8.9□□□□□ -0.98
ZNF558-207ENST00000601372 FER1L6-AS1Q8NA97 138 aa8.9□□□□□ -0.98
ZNF558-207ENST00000601372 SLC25A39Q9BZJ4 359 aaPredicted RBP8.9□□□□□ -0.98
ZNF558-207ENST00000601372 CENPFP49454 3210 aa8.9□□□□□ -0.98
ZNF558-207ENST00000601372 KRTAP27-1Q3LI81 207 aa8.9□□□□□ -0.99
ZNF558-207ENST00000601372 RNF5Q99942 180 aa8.9□□□□□ -0.99
ZNF558-207ENST00000601372 PSG8Q9UQ74 426 aa8.9□□□□□ -0.99
ZNF558-207ENST00000601372 NCKAP5O14513 1909 aa8.9□□□□□ -0.99
ZNF558-207ENST00000601372 LCN12Q6JVE5 192 aa8.9□□□□□ -0.99
ZNF558-207ENST00000601372 C10orf105Q8TEF2 133 aa8.9□□□□□ -0.99
ZNF558-207ENST00000601372 RNF138Q8WVD3 245 aa8.9□□□□□ -0.99
ZNF558-207ENST00000601372 TRAV8-1A0A0A6YYK1 113 aa8.89□□□□□ -0.99
ZNF558-207ENST00000601372 LEPP41159 167 aa8.89□□□□□ -0.99
ZNF558-207ENST00000601372 SAPCD1Q5SSQ6 148 aa8.89□□□□□ -0.99
ZNF558-207ENST00000601372 SIGLEC9Q9Y336 463 aa8.89□□□□□ -0.99
ZNF558-207ENST00000601372 TRBV7-1A0A0A6YYK4 115 aa8.89□□□□□ -0.99
ZNF558-207ENST00000601372 C9JCJ5 164 aa8.89□□□□□ -0.99
ZNF558-207ENST00000601372 LINC00614P0C842 121 aa8.89□□□□□ -0.99
ZNF558-207ENST00000601372 OR1N2Q8NGR9 330 aa8.89□□□□□ -0.99
ZNF558-207ENST00000601372 SLC25A2Q9BXI2 301 aa8.89□□□□□ -0.99
ZNF558-207ENST00000601372 LAMTOR2Q9Y2Q5 125 aa8.89□□□□□ -0.99
ZNF558-207ENST00000601372 DOCK10Q96BY6 2186 aa8.89□□□□□ -0.99
ZNF558-207ENST00000601372 SSBP2P81877 361 aaPredicted RBP8.89□□□□□ -0.99
ZNF558-207ENST00000601372 C15orf65H3BRN8 121 aa8.89□□□□□ -0.99
ZNF558-207ENST00000601372 NDUFA3O95167 84 aa8.89□□□□□ -0.99
ZNF558-207ENST00000601372 LMO1P25800 156 aa8.89□□□□□ -0.99
ZNF558-207ENST00000601372 DEFB104AQ8WTQ1 72 aa8.89□□□□□ -0.99
ZNF558-207ENST00000601372 DIAPH2-AS1Q14236 149 aa8.89□□□□□ -0.99
ZNF558-207ENST00000601372 KMT2EQ8IZD2 1858 aa8.89□□□□□ -0.99
ZNF558-207ENST00000601372 FOXC2Q99958 501 aa8.89□□□□□ -0.99
ZNF558-207ENST00000601372 MMP23AO75900 390 aa8.88□□□□□ -0.99
ZNF558-207ENST00000601372 ZNF138P52744 262 aa8.88□□□□□ -0.99
ZNF558-207ENST00000601372 FAM71F2Q6NXP2 309 aa8.88□□□□□ -0.99
ZNF558-207ENST00000601372 PKDREJQ9NTG1 2253 aa8.88□□□□□ -0.99
ZNF558-207ENST00000601372 TRAV8-6A0A0B4J262 113 aa8.88□□□□□ -0.99
ZNF558-207ENST00000601372 FAM223BA6NKX1 122 aa8.88□□□□□ -0.99
ZNF558-207ENST00000601372 SIGLEC15Q6ZMC9 328 aa8.88□□□□□ -0.99
ZNF558-207ENST00000601372 FAM223AQ8IWN6 122 aa8.88□□□□□ -0.99
ZNF558-207ENST00000601372 USMG5Q96IX5 58 aa8.88□□□□□ -0.99
ZNF558-207ENST00000601372 COTL1Q14019 142 aa8.88□□□□□ -0.99
ZNF558-207ENST00000601372 PEF1Q9UBV8 284 aaKnown RBP8.88□□□□□ -0.99
ZNF558-207ENST00000601372 PCNX3Q9H6A9 2034 aa8.88□□□□□ -0.99
ZNF558-207ENST00000601372 ATP6V0E1O15342 81 aa8.88□□□□□ -0.99
ZNF558-207ENST00000601372 IGHV4-59P01825 116 aa8.88□□□□□ -0.99
ZNF558-207ENST00000601372 NDPQ00604 133 aa8.88□□□□□ -0.99
ZNF558-207ENST00000601372 PSMG4Q5JS54 123 aa8.88□□□□□ -0.99
ZNF558-207ENST00000601372 PVRIGQ6DKI7 326 aa8.88□□□□□ -0.99
ZNF558-207ENST00000601372 LYPD6BQ8NI32 183 aa8.88□□□□□ -0.99
ZNF558-207ENST00000601372 M0R3E3 92 aa8.88□□□□□ -0.99
ZNF558-207ENST00000601372 FABP2P12104 132 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms