RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 OR10W1Q8NGF6 305 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 OR1P1Q8NH06 330 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 TERB2Q8NHR7 220 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 ZFAND1Q8TCF1 268 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 DYNC2LI1Q8TCX1 351 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 RAB2BQ8WUD1 216 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 SMIM4Q8WVI0 70 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 TXN2Q99757 166 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 SPXQ9BT56 116 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 ZNF436Q9C0F3 470 aaPredicted RBP2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 NAA50Q9GZZ1 169 aaKnown RBP2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 MIXL1Q9H2W2 232 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 EDA2RQ9HAV5 297 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 PALMDQ9NP74 551 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 MRPL27Q9P0M9 148 aaKnown RBP2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 MBD2Q9UBB5 411 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 EXTL2Q9UBQ6 330 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 OR51B2Q9Y5P1 312 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 A0A0U1RRA0 63 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 C3orf85A0A1B0GTC6 90 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 FAM25AB3EWG3 89 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 FAM25CB3EWG5 89 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 FAM25GB3EWG6 89 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 PPP5D1E7EU14 171 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 I3L2K1 104 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 K7EIM0 57 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 NDUFA4O00483 81 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 GSTZ1O43708 216 aaPredicted RBP2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 CDS2O95674 445 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 RAB3DO95716 219 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 CD3DP04234 171 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 IFNA6P05013 189 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 CTSDP07339 412 aaPredicted RBP2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 CTSGP08311 255 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 G6PCP35575 357 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 RPL5P46777 297 aaKnown RBP2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 PIGPP57054 158 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 TAS2R19P59542 299 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 HSPE1P61604 102 aaKnown RBP2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 ERHP84090 104 aaKnown RBP2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 PRCDQ00LT1 54 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 SPCS2Q15005 226 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 BSXQ3C1V8 233 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 ZNF57Q68EA5 555 aaPredicted RBP2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 SLC25A24Q6NUK1 477 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 PLET1Q6UQ28 207 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 UNQ9165/PRO28630Q6UXU0 137 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 C19orf35Q6ZS72 473 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 H2BFWTQ7Z2G1 175 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 TMEM61Q8N0U2 210 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 CCDC71LQ8N9Z2 235 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 MUC7Q8TAX7 377 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 DYNLRB2Q8TF09 96 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 GLYATL2Q8WU03 294 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 DEDD2Q8WXF8 326 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 MRGPRFQ96AM1 343 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 OR10C1Q96KK4 312 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 TP53RKQ96S44 253 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 NDUFAF3Q9BU61 184 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 NXF2Q9GZY0 626 aaKnown RBP2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 SLC2A8Q9NY64 477 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 C21orf62Q9NYP8 219 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 CCDC59Q9P031 241 aaKnown RBP2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 UFC1Q9Y3C8 167 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 RYR1P21817 5038 aa2.48□□□□□ -2.01
CKS1BP3-201ENST00000600888 CSMD3Q7Z407 3707 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 BIRC6Q9NR09 4857 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 HUWE1Q7Z6Z7 4374 aaKnown RBP2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 IGLV8-61A0A075B6I0 122 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 PIGBOS1A0A0B4J2F0 54 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 TRBV7-9A0A0J9YWB2 115 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 ANKRD20A5PA0PJZ0 165 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 OR11H12B2RN74 326 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 DISC1C4P0D8 188 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 H3BMQ9 156 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 ZNF701M0R085 212 aaPredicted RBP2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 CORTO00230 105 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 NUPL2O15504 423 aaKnown RBP2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 RGS5O15539 181 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 IGKV1-5P01602 117 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 IGHV3-23P01764 117 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 REG1AP05451 166 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 CD5P06127 495 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 CD7P09564 240 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 AKAIN1P0CW23 69 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 SUB1P53999 127 aaKnown RBP eCLIP2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 CMC4P56277 68 aaPredicted RBP2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 CASC10Q5T4H9 136 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 LAMTOR1Q6IAA8 161 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 SLC16A13Q7RTY0 426 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 CLVS1Q8IUQ0 354 aaPredicted RBP2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 CENPSQ8N2Z9 138 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 OR13C8Q8NGS7 320 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 OR52E5Q8NH55 327 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 MARCH1Q8TCQ1 289 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 RBPMSQ93062 196 aaKnown RBP2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 IL22RA2Q969J5 263 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 ISOC1Q96CN7 298 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 GALNT14Q96FL9 552 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 DIRAS2Q96HU8 199 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms