RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 MRAPQ8TCY5 172 aa12.38□□□□□ -0.43
SHKBP1-219ENST00000599575 DCANP1Q8TF63 244 aa12.38□□□□□ -0.43
SHKBP1-219ENST00000599575 HYLS1Q96M11 299 aa12.38□□□□□ -0.43
SHKBP1-219ENST00000599575 SLC25A22Q9H936 323 aa12.38□□□□□ -0.43
SHKBP1-219ENST00000599575 hCG_2014768A0A024R1R8 64 aa12.37□□□□□ -0.43
SHKBP1-219ENST00000599575 OR11H12B2RN74 326 aa12.37□□□□□ -0.43
SHKBP1-219ENST00000599575 SMLR1H3BR10 107 aa12.37□□□□□ -0.43
SHKBP1-219ENST00000599575 PRB2P02812 416 aaPredicted RBP12.37□□□□□ -0.43
SHKBP1-219ENST00000599575 CD7P09564 240 aa12.37□□□□□ -0.43
SHKBP1-219ENST00000599575 SNRPD3P62318 126 aaKnown RBP12.37□□□□□ -0.43
SHKBP1-219ENST00000599575 OR11H4Q8NGC9 324 aa12.37□□□□□ -0.43
SHKBP1-219ENST00000599575 OR2G3Q8NGZ4 309 aa12.37□□□□□ -0.43
SHKBP1-219ENST00000599575 UHRF2Q96PU4 802 aa12.37□□□□□ -0.43
SHKBP1-219ENST00000599575 SCRT1Q9BWW7 348 aa12.37□□□□□ -0.43
SHKBP1-219ENST00000599575 MRPL32Q9BYC8 188 aaKnown RBP12.37□□□□□ -0.43
SHKBP1-219ENST00000599575 MBP02144 154 aa12.36□□□□□ -0.43
SHKBP1-219ENST00000599575 ID1P41134 155 aa12.36□□□□□ -0.43
SHKBP1-219ENST00000599575 EIF5AP63241 154 aaKnown RBP12.36□□□□□ -0.43
SHKBP1-219ENST00000599575 GBGT1Q8N5D6 347 aa12.36□□□□□ -0.43
SHKBP1-219ENST00000599575 ARPC5LQ9BPX5 153 aa12.36□□□□□ -0.43
SHKBP1-219ENST00000599575 RSG1Q9BU20 258 aa12.36□□□□□ -0.43
SHKBP1-219ENST00000599575 SLC25A32Q9H2D1 315 aa12.36□□□□□ -0.43
SHKBP1-219ENST00000599575 C19orf73Q9NVV2 129 aa12.36□□□□□ -0.43
SHKBP1-219ENST00000599575 IGKV3-7A0A075B6H7 116 aa12.35□□□□□ -0.43
SHKBP1-219ENST00000599575 A0A087X0K7 114 aa12.35□□□□□ -0.43
SHKBP1-219ENST00000599575 ISLRO14498 428 aa12.35□□□□□ -0.43
SHKBP1-219ENST00000599575 ATF4P18848 351 aaPredicted RBP12.35□□□□□ -0.43
SHKBP1-219ENST00000599575 CXCL2P19875 107 aa12.35□□□□□ -0.43
SHKBP1-219ENST00000599575 GUK1Q16774 197 aa12.35□□□□□ -0.43
SHKBP1-219ENST00000599575 ACOT6Q3I5F7 207 aaPredicted RBP12.35□□□□□ -0.43
SHKBP1-219ENST00000599575 DEFB121Q5J5C9 76 aa12.35□□□□□ -0.43
SHKBP1-219ENST00000599575 FFAR4Q5NUL3 377 aa12.35□□□□□ -0.43
SHKBP1-219ENST00000599575 TMEM14CQ9P0S9 112 aa12.35□□□□□ -0.43
SHKBP1-219ENST00000599575 SELENOKQ9Y6D0 94 aa12.35□□□□□ -0.43
SHKBP1-219ENST00000599575 KANTRA0A1W2PQU2 76 aa12.34□□□□□ -0.43
SHKBP1-219ENST00000599575 IGHV4-30-4P0DP06 118 aa12.34□□□□□ -0.43
SHKBP1-219ENST00000599575 M6PRP20645 277 aa12.34□□□□□ -0.43
SHKBP1-219ENST00000599575 TFPI2P48307 235 aa12.34□□□□□ -0.43
SHKBP1-219ENST00000599575 PSMB3P49720 205 aa12.34□□□□□ -0.43
SHKBP1-219ENST00000599575 RHOBP62745 196 aa12.34□□□□□ -0.43
SHKBP1-219ENST00000599575 ODF3L2Q3SX64 289 aa12.34□□□□□ -0.43
SHKBP1-219ENST00000599575 FAM78BQ5VT40 261 aa12.34□□□□□ -0.43
SHKBP1-219ENST00000599575 LEMD1Q68G75 181 aa12.34□□□□□ -0.43
SHKBP1-219ENST00000599575 RPL7L1Q6DKI1 246 aaKnown RBP12.34□□□□□ -0.43
SHKBP1-219ENST00000599575 HSD17B11Q8NBQ5 300 aa12.34□□□□□ -0.43
SHKBP1-219ENST00000599575 TUBA4BQ9H853 241 aa12.34□□□□□ -0.43
SHKBP1-219ENST00000599575 CLEC5AQ9NY25 188 aa12.34□□□□□ -0.43
SHKBP1-219ENST00000599575 C4BPBP20851 252 aa12.33□□□□□ -0.44
SHKBP1-219ENST00000599575 ATP6V0CP27449 155 aa12.33□□□□□ -0.44
SHKBP1-219ENST00000599575 TAS2R45P59539 299 aa12.33□□□□□ -0.44
SHKBP1-219ENST00000599575 WFDC3Q8IUB2 231 aa12.33□□□□□ -0.44
SHKBP1-219ENST00000599575 HRH4Q9H3N8 390 aa12.33□□□□□ -0.44
SHKBP1-219ENST00000599575 MAP6D1Q9H9H5 199 aa12.33□□□□□ -0.44
SHKBP1-219ENST00000599575 FUT9Q9Y231 359 aa12.33□□□□□ -0.44
SHKBP1-219ENST00000599575 SOCS3O14543 225 aa12.32□□□□□ -0.44
SHKBP1-219ENST00000599575 MRPS12O15235 138 aaKnown RBP12.32□□□□□ -0.44
SHKBP1-219ENST00000599575 BCL2L11O43521 198 aa12.32□□□□□ -0.44
SHKBP1-219ENST00000599575 LCN15Q6UWW0 184 aa12.32□□□□□ -0.44
SHKBP1-219ENST00000599575 CYTL1Q9NRR1 136 aa12.32□□□□□ -0.44
SHKBP1-219ENST00000599575 A0A1B0GVG6 124 aa12.31□□□□□ -0.44
SHKBP1-219ENST00000599575 PFDN1O60925 122 aa12.31□□□□□ -0.44
SHKBP1-219ENST00000599575 ZNF253O75346 499 aa12.31□□□□□ -0.44
SHKBP1-219ENST00000599575 PDE6HQ13956 83 aa12.31□□□□□ -0.44
SHKBP1-219ENST00000599575 ZFP69Q49AA0 526 aa12.31□□□□□ -0.44
SHKBP1-219ENST00000599575 GCSAMLQ5JQS6 135 aa12.31□□□□□ -0.44
SHKBP1-219ENST00000599575 SPATA31B1PQ5VZV4 182 aa12.31□□□□□ -0.44
SHKBP1-219ENST00000599575 DEFB125Q8N687 156 aa12.31□□□□□ -0.44
SHKBP1-219ENST00000599575 C16orf92Q96LL3 132 aa12.31□□□□□ -0.44
SHKBP1-219ENST00000599575 B9D2Q9BPU9 175 aa12.31□□□□□ -0.44
SHKBP1-219ENST00000599575 SLC50A1Q9BRV3 221 aa12.31□□□□□ -0.44
SHKBP1-219ENST00000599575 A0A1W2PPV4 95 aa12.3□□□□□ -0.44
SHKBP1-219ENST00000599575 IGLC2P0DOY2 106 aa12.3□□□□□ -0.44
SHKBP1-219ENST00000599575 DEFB131AP59861 70 aa12.3□□□□□ -0.44
SHKBP1-219ENST00000599575 MORN5Q5VZ52 161 aa12.3□□□□□ -0.44
SHKBP1-219ENST00000599575 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.3□□□□□ -0.44
SHKBP1-219ENST00000599575 LINC00322Q6ZN03 302 aaPredicted RBP12.3□□□□□ -0.44
SHKBP1-219ENST00000599575 TMUB2Q71RG4 321 aa12.3□□□□□ -0.44
SHKBP1-219ENST00000599575 OR10G4Q8NGN3 311 aa12.3□□□□□ -0.44
SHKBP1-219ENST00000599575 OR10G9Q8NGN4 311 aa12.3□□□□□ -0.44
SHKBP1-219ENST00000599575 OR10G7Q8NGN6 311 aa12.3□□□□□ -0.44
SHKBP1-219ENST00000599575 SRD5A3Q9H8P0 318 aa12.3□□□□□ -0.44
SHKBP1-219ENST00000599575 FRMD6-AS1P0C7T7 363 aa12.29□□□□□ -0.44
SHKBP1-219ENST00000599575 SEC11BP0C7V7 166 aa12.29□□□□□ -0.44
SHKBP1-219ENST00000599575 ZNF688P0C7X2 276 aa12.29□□□□□ -0.44
SHKBP1-219ENST00000599575 HIST1H1EP10412 219 aaKnown RBP12.29□□□□□ -0.44
SHKBP1-219ENST00000599575 SPP1P10451 314 aa12.29□□□□□ -0.44
SHKBP1-219ENST00000599575 KHDC3LQ587J8 217 aa12.29□□□□□ -0.44
SHKBP1-219ENST00000599575 LRRC20Q8TCA0 184 aa12.29□□□□□ -0.44
SHKBP1-219ENST00000599575 RPRMQ9NS64 109 aa12.29□□□□□ -0.44
SHKBP1-219ENST00000599575 UBQLN2Q9UHD9 624 aa12.29□□□□□ -0.44
SHKBP1-219ENST00000599575 LOC102724200A0A096LPH7 203 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-219ENST00000599575 KIR2DL5BA0A0G2JN68 375 aa12.28□□□□□ -0.44
SHKBP1-219ENST00000599575 KIR2DL5BA0A0G2JPC4 375 aa12.28□□□□□ -0.44
SHKBP1-219ENST00000599575 NHLRC4P0CG21 123 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-219ENST00000599575 LGALSLQ3ZCW2 172 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-219ENST00000599575 TMEM41BQ5BJD5 291 aa12.28□□□□□ -0.44
SHKBP1-219ENST00000599575 PSMG4Q5JS54 123 aa12.28□□□□□ -0.44
SHKBP1-219ENST00000599575 EIF5AL1Q6IS14 154 aaKnown RBP12.28□□□□□ -0.44
SHKBP1-219ENST00000599575 PQLC2Q6ZP29 291 aa12.28□□□□□ -0.44
SHKBP1-219ENST00000599575 MIR17HGQ75NE6 70 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 228.8 ms