RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 EPPK1P58107 5090 aaKnown RBP10.86□□□□□ -0.67
LIG1-215ENST00000597901 IGLL5B9A064 214 aa10.85□□□□□ -0.67
LIG1-215ENST00000597901 CCSO14618 274 aa10.85□□□□□ -0.67
LIG1-215ENST00000597901 DEDDO75618 318 aa10.85□□□□□ -0.67
LIG1-215ENST00000597901 OR5G3P0C626 314 aa10.85□□□□□ -0.67
LIG1-215ENST00000597901 TCTAP57738 103 aa10.85□□□□□ -0.67
LIG1-215ENST00000597901 ZNF846Q147U1 533 aa10.85□□□□□ -0.67
LIG1-215ENST00000597901 LINC00299Q6ZSB3 139 aa10.85□□□□□ -0.67
LIG1-215ENST00000597901 ZNF709Q8N972 641 aa10.85□□□□□ -0.67
LIG1-215ENST00000597901 NEU1Q99519 415 aa10.85□□□□□ -0.67
LIG1-215ENST00000597901 SEC22CQ9BRL7 303 aa10.85□□□□□ -0.67
LIG1-215ENST00000597901 SLC35B3Q9H1N7 401 aa10.85□□□□□ -0.67
LIG1-215ENST00000597901 MGAT4CQ9UBM8 478 aa10.85□□□□□ -0.67
LIG1-215ENST00000597901 APLNQ9ULZ1 77 aa10.85□□□□□ -0.67
LIG1-215ENST00000597901 TRAV8-2A0A0B4J237 113 aa10.84□□□□□ -0.67
LIG1-215ENST00000597901 SMIM9A6NGZ8 99 aa10.84□□□□□ -0.67
LIG1-215ENST00000597901 ZNF705FA8MVS1 300 aaPredicted RBP10.84□□□□□ -0.67
LIG1-215ENST00000597901 FAM25EA8MYX2 175 aa10.84□□□□□ -0.67
LIG1-215ENST00000597901 H3BRN7 92 aa10.84□□□□□ -0.67
LIG1-215ENST00000597901 K7EPK0 472 aa10.84□□□□□ -0.67
LIG1-215ENST00000597901 H2AFB2P0C5Z0 115 aa10.84□□□□□ -0.67
LIG1-215ENST00000597901 LINC00869P0C866 280 aa10.84□□□□□ -0.67
LIG1-215ENST00000597901 ZNF705DP0CH99 300 aaPredicted RBP10.84□□□□□ -0.67
LIG1-215ENST00000597901 ZNF705BP0CI00 300 aaPredicted RBP10.84□□□□□ -0.67
LIG1-215ENST00000597901 C12orf74Q32Q52 190 aa10.84□□□□□ -0.67
LIG1-215ENST00000597901 IGFL4Q6B9Z1 124 aa10.84□□□□□ -0.67
LIG1-215ENST00000597901 TEPPQ6URK8 271 aa10.84□□□□□ -0.67
LIG1-215ENST00000597901 PATE2Q6UY27 113 aa10.84□□□□□ -0.67
LIG1-215ENST00000597901 Q6ZTC4 211 aa10.84□□□□□ -0.67
LIG1-215ENST00000597901 C12orf45Q8N5I9 185 aaPredicted RBP10.84□□□□□ -0.67
LIG1-215ENST00000597901 GGACTQ9BVM4 153 aa10.84□□□□□ -0.67
LIG1-215ENST00000597901 NUDT15Q9NV35 164 aa10.84□□□□□ -0.67
LIG1-215ENST00000597901 CELA1Q9UNI1 258 aa10.84□□□□□ -0.67
LIG1-215ENST00000597901 BIRC6Q9NR09 4857 aa10.83□□□□□ -0.68
LIG1-215ENST00000597901 IGHV3OR16-12A0A075B7B8 117 aa10.83□□□□□ -0.68
LIG1-215ENST00000597901 TRAV10A0A0B4J240 114 aa10.83□□□□□ -0.68
LIG1-215ENST00000597901 C5orf51A6NDU8 294 aa10.83□□□□□ -0.68
LIG1-215ENST00000597901 L7N2F9 121 aa10.83□□□□□ -0.68
LIG1-215ENST00000597901 RPL7P18124 248 aaKnown RBP10.83□□□□□ -0.68
LIG1-215ENST00000597901 VAMP2P63027 116 aa10.83□□□□□ -0.68
LIG1-215ENST00000597901 FGL1Q08830 312 aa10.83□□□□□ -0.68
LIG1-215ENST00000597901 ZNF767PQ75MW2 155 aa10.83□□□□□ -0.68
LIG1-215ENST00000597901 RPP25LQ8N5L8 163 aaKnown RBP10.83□□□□□ -0.68
LIG1-215ENST00000597901 C2orf50Q96LR7 162 aa10.83□□□□□ -0.68
LIG1-215ENST00000597901 UHRF2Q96PU4 802 aa10.83□□□□□ -0.68
LIG1-215ENST00000597901 ARL6Q9H0F7 186 aa10.83□□□□□ -0.68
LIG1-215ENST00000597901 FAM240BA0A1B0GVZ2 78 aa10.82□□□□□ -0.68
LIG1-215ENST00000597901 GOSR2O14653 212 aa10.82□□□□□ -0.68
LIG1-215ENST00000597901 SLC38A11Q08AI6 406 aa10.82□□□□□ -0.68
LIG1-215ENST00000597901 S100A7AQ86SG5 101 aa10.82□□□□□ -0.68
LIG1-215ENST00000597901 C1orf158Q8N1D5 194 aa10.82□□□□□ -0.68
LIG1-215ENST00000597901 LSM5Q9Y4Y9 91 aaKnown RBP10.82□□□□□ -0.68
LIG1-215ENST00000597901 A8MTW9 85 aa10.81□□□□□ -0.68
LIG1-215ENST00000597901 AGPAT2O15120 278 aa10.81□□□□□ -0.68
LIG1-215ENST00000597901 BCAP31P51572 246 aa10.81□□□□□ -0.68
LIG1-215ENST00000597901 PXDC1Q5TGL8 231 aa10.81□□□□□ -0.68
LIG1-215ENST00000597901 MZT2BQ6NZ67 158 aa10.81□□□□□ -0.68
LIG1-215ENST00000597901 AMTNQ6UX39 209 aa10.81□□□□□ -0.68
LIG1-215ENST00000597901 RNF182Q8N6D2 247 aa10.81□□□□□ -0.68
LIG1-215ENST00000597901 S100ZQ8WXG8 99 aa10.81□□□□□ -0.68
LIG1-215ENST00000597901 ARV1Q9H2C2 271 aa10.81□□□□□ -0.68
LIG1-215ENST00000597901 C11orf1Q9H5F2 150 aa10.81□□□□□ -0.68
LIG1-215ENST00000597901 GOLT1BQ9Y3E0 138 aa10.81□□□□□ -0.68
LIG1-215ENST00000597901 RFNGQ9Y644 331 aa10.81□□□□□ -0.68
LIG1-215ENST00000597901 TMEM189A5PLL7 270 aa10.8□□□□□ -0.68
LIG1-215ENST00000597901 FAM24AA6NFZ4 105 aa10.8□□□□□ -0.68
LIG1-215ENST00000597901 DUSP14O95147 198 aaKnown RBP10.8□□□□□ -0.68
LIG1-215ENST00000597901 SPART-AS1P0CW21 52 aa10.8□□□□□ -0.68
LIG1-215ENST00000597901 CNN1P51911 297 aaKnown RBP10.8□□□□□ -0.68
LIG1-215ENST00000597901 EMP1P54849 157 aa10.8□□□□□ -0.68
LIG1-215ENST00000597901 IL15RAQ13261 267 aa10.8□□□□□ -0.68
LIG1-215ENST00000597901 DEFB131BA0A096LNP1 70 aa10.79□□□□□ -0.68
LIG1-215ENST00000597901 A6NHS1 94 aa10.79□□□□□ -0.68
LIG1-215ENST00000597901 MRPS12O15235 138 aaKnown RBP10.79□□□□□ -0.68
LIG1-215ENST00000597901 CST7O76096 145 aa10.79□□□□□ -0.68
LIG1-215ENST00000597901 CAV2P51636 162 aa10.79□□□□□ -0.68
LIG1-215ENST00000597901 PRR20EP86478 221 aa10.79□□□□□ -0.68
LIG1-215ENST00000597901 PRR20CP86479 221 aa10.79□□□□□ -0.68
LIG1-215ENST00000597901 PRR20DP86480 221 aa10.79□□□□□ -0.68
LIG1-215ENST00000597901 PRR20BP86481 221 aa10.79□□□□□ -0.68
LIG1-215ENST00000597901 PRR20AP86496 221 aa10.79□□□□□ -0.68
LIG1-215ENST00000597901 LINC00305Q7Z4B0 112 aa10.79□□□□□ -0.68
LIG1-215ENST00000597901 ZNF546Q86UE3 836 aa10.79□□□□□ -0.68
LIG1-215ENST00000597901 LRRC20Q8TCA0 184 aa10.79□□□□□ -0.68
LIG1-215ENST00000597901 TMEM37Q8WXS4 190 aa10.79□□□□□ -0.68
LIG1-215ENST00000597901 IGF2BP2-AS1Q96M15 143 aa10.79□□□□□ -0.68
LIG1-215ENST00000597901 MGST2Q99735 147 aa10.79□□□□□ -0.68
LIG1-215ENST00000597901 RNF24Q9Y225 148 aa10.79□□□□□ -0.68
LIG1-215ENST00000597901 IGHV4-4A0A075B6R2 117 aa10.78□□□□□ -0.68
LIG1-215ENST00000597901 A0A087X0K7 114 aa10.78□□□□□ -0.68
LIG1-215ENST00000597901 HBE1P02100 147 aa10.78□□□□□ -0.68
LIG1-215ENST00000597901 CXCL3P19876 107 aa10.78□□□□□ -0.68
LIG1-215ENST00000597901 PVALBP20472 110 aaPredicted RBP10.78□□□□□ -0.68
LIG1-215ENST00000597901 ASAH1Q13510 395 aa10.78□□□□□ -0.68
LIG1-215ENST00000597901 RAB31Q13636 194 aa10.78□□□□□ -0.68
LIG1-215ENST00000597901 PSG3Q16557 428 aa10.78□□□□□ -0.68
LIG1-215ENST00000597901 ZNF738Q8NE65 137 aa10.78□□□□□ -0.68
LIG1-215ENST00000597901 OR11H7Q8NGC8 314 aa10.78□□□□□ -0.68
LIG1-215ENST00000597901 RNF126Q9BV68 326 aa10.78□□□□□ -0.68
LIG1-215ENST00000597901 PLA2G2EQ9NZK7 142 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms