RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 IGHV4-59P01825 116 aa7.3□□□□□ -1.24
VPS25-205ENST00000590339 LY6EQ16553 131 aa7.3□□□□□ -1.24
VPS25-205ENST00000590339 Q56UQ5 140 aa7.3□□□□□ -1.24
VPS25-205ENST00000590339 ZNF329Q86UD4 541 aa7.3□□□□□ -1.24
VPS25-205ENST00000590339 NECAP1Q8NC96 275 aa7.3□□□□□ -1.24
VPS25-205ENST00000590339 CCDC140Q96MF4 163 aa7.3□□□□□ -1.24
VPS25-205ENST00000590339 ZNF747Q9BV97 191 aa7.3□□□□□ -1.24
VPS25-205ENST00000590339 ELOVL1Q9BW60 279 aa7.3□□□□□ -1.24
VPS25-205ENST00000590339 PRDM13Q9H4Q3 707 aa7.3□□□□□ -1.24
VPS25-205ENST00000590339 S4R3C0 116 aa7.3□□□□□ -1.24
VPS25-205ENST00000590339 FBN3Q75N90 2809 aa7.29□□□□□ -1.24
VPS25-205ENST00000590339 LOC105371267A0A1B0GV96 52 aa7.29□□□□□ -1.24
VPS25-205ENST00000590339 FAM223BA6NKX1 122 aa7.29□□□□□ -1.24
VPS25-205ENST00000590339 IL4P05112 153 aa7.29□□□□□ -1.24
VPS25-205ENST00000590339 CTSGP08311 255 aa7.29□□□□□ -1.24
VPS25-205ENST00000590339 CRYBB3P26998 211 aa7.29□□□□□ -1.24
VPS25-205ENST00000590339 PPIFP30405 207 aaKnown RBP7.29□□□□□ -1.24
VPS25-205ENST00000590339 RPL35P42766 123 aaKnown RBP7.29□□□□□ -1.24
VPS25-205ENST00000590339 CFHR3Q02985 330 aa7.29□□□□□ -1.24
VPS25-205ENST00000590339 ELOBQ15370 118 aa7.29□□□□□ -1.24
VPS25-205ENST00000590339 USF2Q15853 346 aaPredicted RBP7.29□□□□□ -1.24
VPS25-205ENST00000590339 C15orf32Q32M92 178 aa7.29□□□□□ -1.24
VPS25-205ENST00000590339 SHISA2Q6UWI4 295 aa7.29□□□□□ -1.24
VPS25-205ENST00000590339 ZNF600Q6ZNG1 722 aa7.29□□□□□ -1.24
VPS25-205ENST00000590339 FAM223AQ8IWN6 122 aa7.29□□□□□ -1.24
VPS25-205ENST00000590339 Q8WTZ3 238 aa7.29□□□□□ -1.24
VPS25-205ENST00000590339 ANAPC16Q96DE5 110 aa7.29□□□□□ -1.24
VPS25-205ENST00000590339 IGF2BP2-AS1Q96M15 143 aa7.29□□□□□ -1.24
VPS25-205ENST00000590339 CHRDL1Q9BU40 450 aa7.29□□□□□ -1.24
VPS25-205ENST00000590339 ZFAND3Q9H8U3 227 aa7.29□□□□□ -1.24
VPS25-205ENST00000590339 GAR1Q9NY12 217 aaKnown RBP7.29□□□□□ -1.24
VPS25-205ENST00000590339 OR2T8A6NH00 312 aa7.28□□□□□ -1.24
VPS25-205ENST00000590339 IGHV3-23P01764 117 aa7.28□□□□□ -1.24
VPS25-205ENST00000590339 NBEAP1P0C6P0 100 aa7.28□□□□□ -1.24
VPS25-205ENST00000590339 IGLC2P0DOY2 106 aa7.28□□□□□ -1.24
VPS25-205ENST00000590339 HIST1H1EP10412 219 aaKnown RBP7.28□□□□□ -1.24
VPS25-205ENST00000590339 ATF4P18848 351 aaPredicted RBP7.28□□□□□ -1.24
VPS25-205ENST00000590339 RAB5AP20339 215 aa7.28□□□□□ -1.24
VPS25-205ENST00000590339 IER3P46695 156 aa7.28□□□□□ -1.24
VPS25-205ENST00000590339 SUMO1P63165 101 aaKnown RBP7.28□□□□□ -1.24
VPS25-205ENST00000590339 FAM24BQ8N5W8 94 aa7.28□□□□□ -1.24
VPS25-205ENST00000590339 OR5R1Q8NH85 324 aa7.28□□□□□ -1.24
VPS25-205ENST00000590339 EEF1AKMT3Q96AZ1 226 aa7.28□□□□□ -1.24
VPS25-205ENST00000590339 TRBV24-1A0A075B6N3 115 aa7.27□□□□□ -1.25
VPS25-205ENST00000590339 TRBV7-1A0A0A6YYK4 115 aa7.27□□□□□ -1.25
VPS25-205ENST00000590339 PGPEP1LA6NFU8 196 aa7.27□□□□□ -1.25
VPS25-205ENST00000590339 ZNF98A6NK75 572 aa7.27□□□□□ -1.25
VPS25-205ENST00000590339 H7BYZ3 331 aa7.27□□□□□ -1.25
VPS25-205ENST00000590339 K7EN84 100 aa7.27□□□□□ -1.25
VPS25-205ENST00000590339 AP4M1O00189 453 aa7.27□□□□□ -1.25
VPS25-205ENST00000590339 PEX7O00628 323 aa7.27□□□□□ -1.25
VPS25-205ENST00000590339 TGOLN2O43493 480 aa7.27□□□□□ -1.25
VPS25-205ENST00000590339 IGLV2-8P01709 118 aa7.27□□□□□ -1.25
VPS25-205ENST00000590339 PFN1P07737 140 aaKnown RBP7.27□□□□□ -1.25
VPS25-205ENST00000590339 CXCL1P09341 107 aa7.27□□□□□ -1.25
VPS25-205ENST00000590339 GPR183P32249 361 aa7.27□□□□□ -1.25
VPS25-205ENST00000590339 TAS2R60P59551 318 aa7.27□□□□□ -1.25
VPS25-205ENST00000590339 FLI1Q01543 452 aaPredicted RBP7.27□□□□□ -1.25
VPS25-205ENST00000590339 CENPWQ5EE01 88 aa7.27□□□□□ -1.25
VPS25-205ENST00000590339 LEMD1Q68G75 181 aa7.27□□□□□ -1.25
VPS25-205ENST00000590339 S100A7AQ86SG5 101 aa7.27□□□□□ -1.25
VPS25-205ENST00000590339 C1QL4Q86Z23 238 aa7.27□□□□□ -1.25
VPS25-205ENST00000590339 TMEM86BQ8N661 226 aa7.27□□□□□ -1.25
VPS25-205ENST00000590339 C5orf17Q8NAS9 161 aa7.27□□□□□ -1.25
VPS25-205ENST00000590339 PYGO2Q9BRQ0 406 aa7.27□□□□□ -1.25
VPS25-205ENST00000590339 ZNF586Q9NXT0 402 aa7.27□□□□□ -1.25
VPS25-205ENST00000590339 TRBV19A0A075B6N1 114 aa7.26□□□□□ -1.25
VPS25-205ENST00000590339 PPP1R2P9O14990 202 aa7.26□□□□□ -1.25
VPS25-205ENST00000590339 IGLV1-40P01703 118 aa7.26□□□□□ -1.25
VPS25-205ENST00000590339 CNN1P51911 297 aaKnown RBP7.26□□□□□ -1.25
VPS25-205ENST00000590339 C9orf152Q5JTZ5 239 aa7.26□□□□□ -1.25
VPS25-205ENST00000590339 TEX38Q6PEX7 206 aa7.26□□□□□ -1.25
VPS25-205ENST00000590339 Q6ZS46 218 aa7.26□□□□□ -1.25
VPS25-205ENST00000590339 BPIFA4PQ86YQ2 179 aa7.26□□□□□ -1.25
VPS25-205ENST00000590339 OCC1Q8TAD7 63 aa7.26□□□□□ -1.25
VPS25-205ENST00000590339 Q9H3A6 140 aa7.26□□□□□ -1.25
VPS25-205ENST00000590339 OTORQ9NRC9 128 aa7.26□□□□□ -1.25
VPS25-205ENST00000590339 VPREB3Q9UKI3 123 aa7.26□□□□□ -1.25
VPS25-205ENST00000590339 RNF24Q9Y225 148 aa7.26□□□□□ -1.25
VPS25-205ENST00000590339 KLF12Q9Y4X4 402 aa7.26□□□□□ -1.25
VPS25-205ENST00000590339 TGIF2-C20orf24A0A0A6YYL0 155 aa7.25□□□□□ -1.25
VPS25-205ENST00000590339 CLPSL1A2RUU4 121 aa7.25□□□□□ -1.25
VPS25-205ENST00000590339 HELTA6NFD8 242 aa7.25□□□□□ -1.25
VPS25-205ENST00000590339 BMPR1BO00238 502 aa7.25□□□□□ -1.25
VPS25-205ENST00000590339 GGCTO75223 188 aaKnown RBP7.25□□□□□ -1.25
VPS25-205ENST00000590339 TRGV3P03979 118 aa7.25□□□□□ -1.25
VPS25-205ENST00000590339 GALR1P47211 349 aa7.25□□□□□ -1.25
VPS25-205ENST00000590339 GNG4P50150 75 aa7.25□□□□□ -1.25
VPS25-205ENST00000590339 BLCAPP62952 87 aa7.25□□□□□ -1.25
VPS25-205ENST00000590339 ATP5G2Q06055 141 aa7.25□□□□□ -1.25
VPS25-205ENST00000590339 PDE6HQ13956 83 aa7.25□□□□□ -1.25
VPS25-205ENST00000590339 TMEM183BQ1AE95 376 aa7.25□□□□□ -1.25
VPS25-205ENST00000590339 TOMM20LQ6UXN7 152 aa7.25□□□□□ -1.25
VPS25-205ENST00000590339 SIGLEC15Q6ZMC9 328 aa7.25□□□□□ -1.25
VPS25-205ENST00000590339 LYPD1Q8N2G4 141 aa7.25□□□□□ -1.25
VPS25-205ENST00000590339 OR4F17Q8NGA8 305 aa7.25□□□□□ -1.25
VPS25-205ENST00000590339 BLNKQ8WV28 456 aa7.25□□□□□ -1.25
VPS25-205ENST00000590339 SFRP2Q96HF1 295 aa7.25□□□□□ -1.25
VPS25-205ENST00000590339 MS4A10Q96PG2 267 aa7.25□□□□□ -1.25
VPS25-205ENST00000590339 IMMP2LQ96T52 175 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms