RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 A0A0G2JRQ6 117 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 TEX50A0A1B0GTY4 177 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 TCRBV4S1A1TA0A5B7 111 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 IGLC7A0M8Q6 106 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 CRYM-AS1A6NIL9 109 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 DISC1C4P0D8 188 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 H0Y980 276 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 WRBO00258 174 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 CDS2O95674 445 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 HRASP01112 189 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 KRASP01116 189 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 IGKV1-5P01602 117 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 CRYGCP07315 174 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 PGAM2P15259 253 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 NQO2P16083 231 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 RAB9AP51151 201 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 TAS2R31P59538 309 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 AP3S2P59780 193 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 OR2B8PP59922 312 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 CATR1Q13166 79 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 PLGLAQ15195 96 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 SURF2Q15527 256 aaPredicted RBP2.78□□□□□ -1.96
VMP1-205ENST00000587470 TRIM16LQ309B1 348 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 SP6Q3SY56 376 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 VMA21Q3ZAQ7 101 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 SCGB2B2Q4G0G5 96 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 UFSP1Q6NVU6 142 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 SSX9Q7RTT3 188 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 TOMM5Q8N4H5 51 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 COMMD1Q8N668 190 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 LFNGQ8NES3 379 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 OR5T1Q8NG75 326 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 OR4C5Q8NGB2 326 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 OR1L6Q8NGR2 347 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 GRPEL2Q8TAA5 225 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 ZFAND1Q8TCF1 268 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 CASTOR1Q8WTX7 329 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 SRSF12Q8WXF0 261 aaKnown RBP2.78□□□□□ -1.96
VMP1-205ENST00000587470 ARPC1AQ92747 370 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 GALNT14Q96FL9 552 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 TMEM56Q96MV1 263 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 P2RX4Q99571 388 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 PRRT1Q99946 306 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 SLC25A21Q9BQT8 299 aaPredicted RBP2.78□□□□□ -1.96
VMP1-205ENST00000587470 PARP11Q9NR21 331 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 NDUFA4L2Q9NRX3 87 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 TMEM14BQ9NUH8 114 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 COMMD9Q9P000 198 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 TSSC4Q9Y5U2 329 aaPredicted RBP2.78□□□□□ -1.96
VMP1-205ENST00000587470 TMEM56-RWDD3S4R434 201 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 HERC2O95714 4834 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 RYR2Q92736 4967 aa2.78□□□□□ -1.96
VMP1-205ENST00000587470 C3orf85A0A1B0GTC6 90 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 LINC00854A0A1B0GVQ3 168 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 A0A1B0GWB2 263 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 ZNF705EA8MWA4 302 aaPredicted RBP2.77□□□□□ -1.97
VMP1-205ENST00000587470 BOLA2-SMG1P6H3BVE0 249 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 I3L521 148 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 K7EIL1 84 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 NDUFB6O95139 128 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 CNIH1O95406 144 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 OR5AC1P0C628 307 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 APELAP0DMC3 54 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 CTRB1P17538 263 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 HLA-GP17693 338 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 VDAC1P21796 283 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 CD40LGP29965 261 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 SLC6A1P30531 599 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 MAS1LP35410 378 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 G6PCP35575 357 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 RPL27AP46776 148 aaKnown RBP2.77□□□□□ -1.97
VMP1-205ENST00000587470 CCR6P51684 374 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 SLC35B1P78383 322 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 RUNX1Q01196 453 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 WT1-ASQ06250 92 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 TMEM267Q0VDI3 215 aaPredicted RBP2.77□□□□□ -1.97
VMP1-205ENST00000587470 TNXAQ16473 311 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 NSUN5P1Q3KNT7 163 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 CTRB2Q6GPI1 263 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 UNQ5815/PRO19632Q6UWF5 114 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 C19orf35Q6ZS72 473 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 ZNF695Q8IW36 515 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 SELENOHQ8IZQ5 122 aaKnown RBP2.77□□□□□ -1.97
VMP1-205ENST00000587470 MTURNQ8N3F0 131 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 TTC9CQ8N5M4 171 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 OR10W1Q8NGF6 305 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 OR4X2Q8NGF9 303 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 OR1L8Q8NGR8 309 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 OR4A5Q8NH83 315 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 VSTM2AQ8TAG5 236 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 UBE2E2Q96LR5 201 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 SPIN2AQ99865 258 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 SPIN2BQ9BPZ2 258 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 CCDC32Q9BV29 185 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 TMEM222Q9H0R3 208 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 ALX4Q9H161 411 aaPredicted RBP2.77□□□□□ -1.97
VMP1-205ENST00000587470 NAA60Q9H7X0 242 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 MCUBQ9NWR8 336 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 COPZ2Q9P299 210 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms