RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 ARV1Q9H2C2 271 aa12.5□□□□□ -0.41
VAT1-204ENST00000587147 RPL12P30050 165 aaKnown RBP12.49□□□□□ -0.41
VAT1-204ENST00000587147 TMEM41BQ5BJD5 291 aa12.49□□□□□ -0.41
VAT1-204ENST00000587147 FAM24BQ8N5W8 94 aa12.49□□□□□ -0.41
VAT1-204ENST00000587147 WWC2-AS2Q96NR7 200 aa12.49□□□□□ -0.41
VAT1-204ENST00000587147 SLC25A32Q9H2D1 315 aa12.49□□□□□ -0.41
VAT1-204ENST00000587147 MBD2Q9UBB5 411 aa12.49□□□□□ -0.41
VAT1-204ENST00000587147 HSPB11Q9Y547 144 aa12.49□□□□□ -0.41
VAT1-204ENST00000587147 HUWE1Q7Z6Z7 4374 aaKnown RBP12.48□□□□□ -0.41
VAT1-204ENST00000587147 SOCS3O14543 225 aa12.48□□□□□ -0.41
VAT1-204ENST00000587147 COX7A2P2O60397 106 aa12.48□□□□□ -0.41
VAT1-204ENST00000587147 ZNF688P0C7X2 276 aa12.48□□□□□ -0.41
VAT1-204ENST00000587147 FGF7P21781 194 aa12.48□□□□□ -0.41
VAT1-204ENST00000587147 SPATA31B1PQ5VZV4 182 aa12.48□□□□□ -0.41
VAT1-204ENST00000587147 PATE2Q6UY27 113 aa12.48□□□□□ -0.41
VAT1-204ENST00000587147 ATP5SQ99766 215 aa12.48□□□□□ -0.41
VAT1-204ENST00000587147 NPCDR1Q9BY65 106 aa12.48□□□□□ -0.41
VAT1-204ENST00000587147 PARD6GQ9BYG4 376 aaPredicted RBP12.48□□□□□ -0.41
VAT1-204ENST00000587147 SLC25A22Q9H936 323 aa12.48□□□□□ -0.41
VAT1-204ENST00000587147 DNAJC4Q9NNZ3 241 aa12.48□□□□□ -0.41
VAT1-204ENST00000587147 DOK5Q9P104 306 aa12.48□□□□□ -0.41
VAT1-204ENST00000587147 TENM3Q9P273 2699 aa12.48□□□□□ -0.41
VAT1-204ENST00000587147 NBEAL2Q6ZNJ1 2754 aa12.47□□□□□ -0.41
VAT1-204ENST00000587147 A0A087X0K7 114 aa12.47□□□□□ -0.41
VAT1-204ENST00000587147 B2MP61769 119 aa12.47□□□□□ -0.41
VAT1-204ENST00000587147 C10orf113Q5VZT2 155 aa12.47□□□□□ -0.41
VAT1-204ENST00000587147 LINC00305Q7Z4B0 112 aa12.47□□□□□ -0.41
VAT1-204ENST00000587147 STHQ8IWL8 128 aa12.47□□□□□ -0.41
VAT1-204ENST00000587147 GATAD1Q8WUU5 269 aa12.47□□□□□ -0.41
VAT1-204ENST00000587147 SCRT1Q9BWW7 348 aa12.47□□□□□ -0.41
VAT1-204ENST00000587147 CSTL1Q9H114 145 aa12.47□□□□□ -0.41
VAT1-204ENST00000587147 SLC39A9Q9NUM3 307 aa12.47□□□□□ -0.41
VAT1-204ENST00000587147 SPP1P10451 314 aa12.46□□□□□ -0.41
VAT1-204ENST00000587147 CXCL2P19875 107 aa12.46□□□□□ -0.41
VAT1-204ENST00000587147 PSMG4Q5JS54 123 aa12.46□□□□□ -0.41
VAT1-204ENST00000587147 MORN3Q6PF18 240 aaPredicted RBP12.46□□□□□ -0.41
VAT1-204ENST00000587147 TMEM37Q8WXS4 190 aa12.46□□□□□ -0.41
VAT1-204ENST00000587147 CLUHP3Q96NS8 147 aa12.46□□□□□ -0.41
VAT1-204ENST00000587147 WDR61Q9GZS3 305 aaKnown RBP12.46□□□□□ -0.41
VAT1-204ENST00000587147 PXMP4Q9Y6I8 212 aa12.46□□□□□ -0.41
VAT1-204ENST00000587147 C17orf112F2Z3M2 114 aa12.45□□□□□ -0.42
VAT1-204ENST00000587147 ATF4P18848 351 aaPredicted RBP12.45□□□□□ -0.42
VAT1-204ENST00000587147 CLINT1Q14677 625 aa12.45□□□□□ -0.42
VAT1-204ENST00000587147 MIC13Q5XKP0 118 aa12.45□□□□□ -0.42
VAT1-204ENST00000587147 LEMD1Q68G75 181 aa12.45□□□□□ -0.42
VAT1-204ENST00000587147 TRPT1Q86TN4 253 aaKnown RBP12.45□□□□□ -0.42
VAT1-204ENST00000587147 BPIFA4PQ86YQ2 179 aa12.45□□□□□ -0.42
VAT1-204ENST00000587147 ZNF709Q8N972 641 aa12.45□□□□□ -0.42
VAT1-204ENST00000587147 UHRF2Q96PU4 802 aa12.45□□□□□ -0.42
VAT1-204ENST00000587147 RSG1Q9BU20 258 aa12.45□□□□□ -0.42
VAT1-204ENST00000587147 ZNF124Q15973 351 aa12.44□□□□□ -0.42
VAT1-204ENST00000587147 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.44□□□□□ -0.42
VAT1-204ENST00000587147 FOXI2Q6ZQN5 318 aa12.44□□□□□ -0.42
VAT1-204ENST00000587147 AQP10Q96PS8 301 aa12.44□□□□□ -0.42
VAT1-204ENST00000587147 MRPS12O15235 138 aaKnown RBP12.43□□□□□ -0.42
VAT1-204ENST00000587147 IFNA5P01569 189 aa12.43□□□□□ -0.42
VAT1-204ENST00000587147 HLA-DRB4P13762 266 aa12.43□□□□□ -0.42
VAT1-204ENST00000587147 RPL35AP18077 110 aaKnown RBP12.43□□□□□ -0.42
VAT1-204ENST00000587147 RNF183Q96D59 192 aa12.43□□□□□ -0.42
VAT1-204ENST00000587147 C16orf92Q96LL3 132 aa12.43□□□□□ -0.42
VAT1-204ENST00000587147 C17orf77Q96MU5 243 aa12.43□□□□□ -0.42
VAT1-204ENST00000587147 OVOL2Q9BRP0 275 aa12.43□□□□□ -0.42
VAT1-204ENST00000587147 RPRMQ9NS64 109 aa12.43□□□□□ -0.42
VAT1-204ENST00000587147 CLEC5AQ9NY25 188 aa12.43□□□□□ -0.42
VAT1-204ENST00000587147 HLA-DRB4X5D2U9 266 aa12.43□□□□□ -0.42
VAT1-204ENST00000587147 SPRY2O43597 315 aa12.42□□□□□ -0.42
VAT1-204ENST00000587147 NUTF2P61970 127 aaKnown RBP12.42□□□□□ -0.42
VAT1-204ENST00000587147 GUK1Q16774 197 aa12.42□□□□□ -0.42
VAT1-204ENST00000587147 LCN15Q6UWW0 184 aa12.42□□□□□ -0.42
VAT1-204ENST00000587147 SLC50A1Q9BRV3 221 aa12.42□□□□□ -0.42
VAT1-204ENST00000587147 SAV1Q9H4B6 383 aaPredicted RBP12.42□□□□□ -0.42
VAT1-204ENST00000587147 H3BMM0 161 aa12.41□□□□□ -0.42
VAT1-204ENST00000587147 ZNF266Q14584 549 aa12.41□□□□□ -0.42
VAT1-204ENST00000587147 ACTL10Q5JWF8 245 aa12.41□□□□□ -0.42
VAT1-204ENST00000587147 SCGB1C1Q8TD33 95 aa12.41□□□□□ -0.42
VAT1-204ENST00000587147 C1QTNF4Q9BXJ3 329 aa12.41□□□□□ -0.42
VAT1-204ENST00000587147 MRPL32Q9BYC8 188 aaKnown RBP12.41□□□□□ -0.42
VAT1-204ENST00000587147 HRH4Q9H3N8 390 aa12.41□□□□□ -0.42
VAT1-204ENST00000587147 EDA2RQ9HAV5 297 aa12.41□□□□□ -0.42
VAT1-204ENST00000587147 TMEM14CQ9P0S9 112 aa12.41□□□□□ -0.42
VAT1-204ENST00000587147 EBLN2Q6P2I7 272 aa12.4□□□□□ -0.42
VAT1-204ENST00000587147 INO80EQ8NBZ0 244 aaPredicted RBP12.4□□□□□ -0.42
VAT1-204ENST00000587147 OR2T35Q8NGX2 323 aa12.4□□□□□ -0.42
VAT1-204ENST00000587147 LINC00052Q96N35 136 aa12.4□□□□□ -0.42
VAT1-204ENST00000587147 TIMM9Q9Y5J7 89 aa12.4□□□□□ -0.42
VAT1-204ENST00000587147 DNAH7Q8WXX0 4024 aa12.39□□□□□ -0.43
VAT1-204ENST00000587147 KNCNA6PVL3 124 aa12.39□□□□□ -0.43
VAT1-204ENST00000587147 ZNF253O75346 499 aa12.39□□□□□ -0.43
VAT1-204ENST00000587147 CA1P00915 261 aaPredicted RBP12.39□□□□□ -0.43
VAT1-204ENST00000587147 IGLC2P0DOY2 106 aa12.39□□□□□ -0.43
VAT1-204ENST00000587147 DEFB135Q30KP9 77 aa12.39□□□□□ -0.43
VAT1-204ENST00000587147 RETNQ9HD89 108 aa12.39□□□□□ -0.43
VAT1-204ENST00000587147 A0A0J9YX75 114 aa12.38□□□□□ -0.43
VAT1-204ENST00000587147 A8MTW9 85 aa12.38□□□□□ -0.43
VAT1-204ENST00000587147 PDE6HQ13956 83 aa12.38□□□□□ -0.43
VAT1-204ENST00000587147 IL17DQ8TAD2 202 aa12.38□□□□□ -0.43
VAT1-204ENST00000587147 LRRC20Q8TCA0 184 aa12.38□□□□□ -0.43
VAT1-204ENST00000587147 TNFSF18Q9UNG2 199 aa12.38□□□□□ -0.43
VAT1-204ENST00000587147 AGRNO00468 2067 aa12.38□□□□□ -0.43
VAT1-204ENST00000587147 TRAV8-2A0A0B4J237 113 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 224 ms