RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 CSNK1G2-AS1Q8NCQ2 148 aa14.84□□□□□ -0.03
SS18-224ENST00000584083 OR4B1Q8NGF8 309 aa14.84□□□□□ -0.03
SS18-224ENST00000584083 PHLDA1Q8WV24 401 aaPredicted RBP14.84□□□□□ -0.03
SS18-224ENST00000584083 MFFQ9GZY8 342 aa14.84□□□□□ -0.03
SS18-224ENST00000584083 BATF3Q9NR55 127 aa14.84□□□□□ -0.03
SS18-224ENST00000584083 RPRMQ9NS64 109 aa14.84□□□□□ -0.03
SS18-224ENST00000584083 KLK5Q9Y337 293 aaPredicted RBP14.84□□□□□ -0.03
SS18-224ENST00000584083 IGHV4-28A0A0C4DH34 117 aa14.83□□□□□ -0.04
SS18-224ENST00000584083 FAM24AA6NFZ4 105 aa14.83□□□□□ -0.04
SS18-224ENST00000584083 AGPAT2O15120 278 aa14.83□□□□□ -0.04
SS18-224ENST00000584083 MIFP14174 115 aa14.83□□□□□ -0.04
SS18-224ENST00000584083 NANOS2P60321 138 aaKnown RBP14.83□□□□□ -0.04
SS18-224ENST00000584083 FGL1Q08830 312 aa14.83□□□□□ -0.04
SS18-224ENST00000584083 Q8NAQ8 132 aa14.83□□□□□ -0.04
SS18-224ENST00000584083 UHRF2Q96PU4 802 aa14.83□□□□□ -0.04
SS18-224ENST00000584083 ZNF705EA8MWA4 302 aaPredicted RBP14.82□□□□□ -0.04
SS18-224ENST00000584083 RPL7P18124 248 aaKnown RBP14.82□□□□□ -0.04
SS18-224ENST00000584083 FXYD7P58549 80 aa14.82□□□□□ -0.04
SS18-224ENST00000584083 RAB32Q13637 225 aa14.82□□□□□ -0.04
SS18-224ENST00000584083 SPATA31B1PQ5VZV4 182 aa14.82□□□□□ -0.04
SS18-224ENST00000584083 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.82□□□□□ -0.04
SS18-224ENST00000584083 NRARPQ7Z6K4 114 aa14.82□□□□□ -0.04
SS18-224ENST00000584083 C20orf173Q96LM9 149 aa14.82□□□□□ -0.04
SS18-224ENST00000584083 C11orf1Q9H5F2 150 aa14.82□□□□□ -0.04
SS18-224ENST00000584083 X6R8D5 127 aa14.82□□□□□ -0.04
SS18-224ENST00000584083 F6UB75 175 aa14.81□□□□□ -0.04
SS18-224ENST00000584083 RBMY1A1P0DJD3 496 aaKnown RBP14.81□□□□□ -0.04
SS18-224ENST00000584083 RBMY1CP0DJD4 496 aa14.81□□□□□ -0.04
SS18-224ENST00000584083 IL15RAQ13261 267 aa14.81□□□□□ -0.04
SS18-224ENST00000584083 RAB31Q13636 194 aa14.81□□□□□ -0.04
SS18-224ENST00000584083 RBMY1FQ15415 496 aaKnown RBP14.81□□□□□ -0.04
SS18-224ENST00000584083 PXDC1Q5TGL8 231 aa14.81□□□□□ -0.04
SS18-224ENST00000584083 C17orf77Q96MU5 243 aa14.81□□□□□ -0.04
SS18-224ENST00000584083 ARV1Q9H2C2 271 aa14.81□□□□□ -0.04
SS18-224ENST00000584083 SACSQ9NZJ4 4579 aa14.81□□□□□ -0.04
SS18-224ENST00000584083 INMT-MINDY4F8WBC2 141 aa14.8□□□□□ -0.04
SS18-224ENST00000584083 DEFA1P59665 94 aa14.8□□□□□ -0.04
SS18-224ENST00000584083 DEFA3P59666 94 aa14.8□□□□□ -0.04
SS18-224ENST00000584083 PATE2Q6UY27 113 aa14.8□□□□□ -0.04
SS18-224ENST00000584083 CLUHP3Q96NS8 147 aa14.8□□□□□ -0.04
SS18-224ENST00000584083 MGST2Q99735 147 aa14.8□□□□□ -0.04
SS18-224ENST00000584083 LYRM2Q9NU23 88 aaPredicted RBP14.8□□□□□ -0.04
SS18-224ENST00000584083 UQCC1Q9NVA1 299 aa14.8□□□□□ -0.04
SS18-224ENST00000584083 RNF24Q9Y225 148 aa14.8□□□□□ -0.04
SS18-224ENST00000584083 RYR2Q92736 4967 aa14.8□□□□□ -0.04
SS18-224ENST00000584083 A0A0J9YX75 114 aa14.79□□□□□ -0.04
SS18-224ENST00000584083 COX7A2P2O60397 106 aa14.79□□□□□ -0.04
SS18-224ENST00000584083 PRAF2O60831 178 aa14.79□□□□□ -0.04
SS18-224ENST00000584083 SIX6O95475 246 aa14.79□□□□□ -0.04
SS18-224ENST00000584083 FAM78BQ5VT40 261 aa14.79□□□□□ -0.04
SS18-224ENST00000584083 IGFL4Q6B9Z1 124 aa14.79□□□□□ -0.04
SS18-224ENST00000584083 STX12Q86Y82 276 aa14.79□□□□□ -0.04
SS18-224ENST00000584083 TMEM252Q8N6L7 170 aa14.79□□□□□ -0.04
SS18-224ENST00000584083 LYSTQ99698 3801 aa14.78□□□□□ -0.04
SS18-224ENST00000584083 IGSF23A1L1A6 192 aa14.78□□□□□ -0.04
SS18-224ENST00000584083 CAMLGP49069 296 aa14.78□□□□□ -0.04
SS18-224ENST00000584083 SULT1A1P50225 295 aa14.78□□□□□ -0.04
SS18-224ENST00000584083 HBG1P69891 147 aa14.78□□□□□ -0.04
SS18-224ENST00000584083 HBG2P69892 147 aa14.78□□□□□ -0.04
SS18-224ENST00000584083 PSG9Q00887 426 aa14.78□□□□□ -0.04
SS18-224ENST00000584083 SLC35B3Q9H1N7 401 aa14.78□□□□□ -0.04
SS18-224ENST00000584083 S100A11P31949 105 aa14.77□□□□□ -0.05
SS18-224ENST00000584083 LINC00305Q7Z4B0 112 aa14.77□□□□□ -0.05
SS18-224ENST00000584083 RNF182Q8N6D2 247 aa14.77□□□□□ -0.05
SS18-224ENST00000584083 LRRC20Q8TCA0 184 aa14.77□□□□□ -0.05
SS18-224ENST00000584083 WDR83OSQ9Y284 106 aa14.77□□□□□ -0.05
SS18-224ENST00000584083 IGHV3OR16-12A0A075B7B8 117 aa14.76□□□□□ -0.05
SS18-224ENST00000584083 ELOA3CA0A087WX78 387 aaPredicted RBP14.76□□□□□ -0.05
SS18-224ENST00000584083 TRAV8-2A0A0B4J237 113 aa14.76□□□□□ -0.05
SS18-224ENST00000584083 UBE2L5PA0A1B0GUS4 154 aa14.76□□□□□ -0.05
SS18-224ENST00000584083 RLN2P04090 185 aa14.76□□□□□ -0.05
SS18-224ENST00000584083 C10orf113Q5VZT2 155 aa14.76□□□□□ -0.05
SS18-224ENST00000584083 Q6ZRG5 221 aa14.76□□□□□ -0.05
SS18-224ENST00000584083 ZNF709Q8N972 641 aa14.76□□□□□ -0.05
SS18-224ENST00000584083 ZNF738Q8NE65 137 aa14.76□□□□□ -0.05
SS18-224ENST00000584083 MARVELD1Q9BSK0 173 aa14.76□□□□□ -0.05
SS18-224ENST00000584083 HRH4Q9H3N8 390 aa14.76□□□□□ -0.05
SS18-224ENST00000584083 A0A087X0K7 114 aa14.75□□□□□ -0.05
SS18-224ENST00000584083 LY6G6CO95867 125 aa14.75□□□□□ -0.05
SS18-224ENST00000584083 BAXQ07812 192 aa14.75□□□□□ -0.05
SS18-224ENST00000584083 VWC2Q2TAL6 325 aa14.75□□□□□ -0.05
SS18-224ENST00000584083 LRRC37A5PQ49AS3 106 aa14.75□□□□□ -0.05
SS18-224ENST00000584083 MIC13Q5XKP0 118 aa14.75□□□□□ -0.05
SS18-224ENST00000584083 LINC00476Q8WZB0 136 aa14.75□□□□□ -0.05
SS18-224ENST00000584083 DUSP14O95147 198 aaKnown RBP14.74□□□□□ -0.05
SS18-224ENST00000584083 HLA-DMBP28068 263 aa14.74□□□□□ -0.05
SS18-224ENST00000584083 ATP6V1FQ16864 119 aa14.74□□□□□ -0.05
SS18-224ENST00000584083 ZNF705AQ6ZN79 300 aaPredicted RBP14.74□□□□□ -0.05
SS18-224ENST00000584083 TMEM37Q8WXS4 190 aa14.74□□□□□ -0.05
SS18-224ENST00000584083 NMES1Q9C002 83 aa14.74□□□□□ -0.05
SS18-224ENST00000584083 DNAJC4Q9NNZ3 241 aa14.74□□□□□ -0.05
SS18-224ENST00000584083 GOLT1BQ9Y3E0 138 aa14.74□□□□□ -0.05
SS18-224ENST00000584083 ZNF705DP0CH99 300 aaPredicted RBP14.73□□□□□ -0.05
SS18-224ENST00000584083 ZNF705BP0CI00 300 aaPredicted RBP14.73□□□□□ -0.05
SS18-224ENST00000584083 FGF7P21781 194 aa14.73□□□□□ -0.05
SS18-224ENST00000584083 CNN1P51911 297 aaKnown RBP14.73□□□□□ -0.05
SS18-224ENST00000584083 CYCSP99999 105 aaKnown RBP14.73□□□□□ -0.05
SS18-224ENST00000584083 BPIFA4PQ86YQ2 179 aa14.73□□□□□ -0.05
SS18-224ENST00000584083 SMIM9A6NGZ8 99 aa14.72□□□□□ -0.05
SS18-224ENST00000584083 ZNF705FA8MVS1 300 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms