RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 FBXL17Q9UF56 701 aa12.14□□□□□ -0.47
RNF43-206ENST00000582293 PFDN2Q9UHV9 154 aa12.14□□□□□ -0.47
RNF43-206ENST00000582293 TNFSF18Q9UNG2 199 aa12.14□□□□□ -0.47
RNF43-206ENST00000582293 RFNGQ9Y644 331 aa12.14□□□□□ -0.47
RNF43-206ENST00000582293 PXMP4Q9Y6I8 212 aa12.14□□□□□ -0.47
RNF43-206ENST00000582293 ZNF688P0C7X2 276 aa12.13□□□□□ -0.47
RNF43-206ENST00000582293 LINC00305Q7Z4B0 112 aa12.13□□□□□ -0.47
RNF43-206ENST00000582293 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.12□□□□□ -0.47
RNF43-206ENST00000582293 TM2D3Q9BRN9 247 aa12.12□□□□□ -0.47
RNF43-206ENST00000582293 RSG1Q9BU20 258 aa12.12□□□□□ -0.47
RNF43-206ENST00000582293 PARD6GQ9BYG4 376 aaPredicted RBP12.12□□□□□ -0.47
RNF43-206ENST00000582293 DNAJC4Q9NNZ3 241 aa12.12□□□□□ -0.47
RNF43-206ENST00000582293 ELOA3CA0A087WX78 387 aaPredicted RBP12.11□□□□□ -0.47
RNF43-206ENST00000582293 FXYD6-FXYD2A0A087WZ82 144 aa12.11□□□□□ -0.47
RNF43-206ENST00000582293 TRAV5A0A0B4J249 113 aa12.11□□□□□ -0.47
RNF43-206ENST00000582293 COX7A2P2O60397 106 aa12.11□□□□□ -0.47
RNF43-206ENST00000582293 C10orf113Q5VZT2 155 aa12.11□□□□□ -0.47
RNF43-206ENST00000582293 Q6ZRG5 221 aa12.11□□□□□ -0.47
RNF43-206ENST00000582293 SEPSECSQ9HD40 501 aaKnown RBP12.11□□□□□ -0.47
RNF43-206ENST00000582293 CMC4P56277 68 aaPredicted RBP12.1□□□□□ -0.47
RNF43-206ENST00000582293 OR11H4Q8NGC9 324 aa12.1□□□□□ -0.47
RNF43-206ENST00000582293 GPR82Q96P67 336 aa12.1□□□□□ -0.47
RNF43-206ENST00000582293 LOC102724200A0A096LPH7 203 aaPredicted RBP12.09□□□□□ -0.47
RNF43-206ENST00000582293 TRAV8-2A0A0B4J237 113 aa12.09□□□□□ -0.47
RNF43-206ENST00000582293 NHLRC4P0CG21 123 aaPredicted RBP12.09□□□□□ -0.47
RNF43-206ENST00000582293 GALR1P47211 349 aa12.09□□□□□ -0.47
RNF43-206ENST00000582293 DEFB1P60022 68 aa12.09□□□□□ -0.47
RNF43-206ENST00000582293 PSMG4Q5JS54 123 aa12.09□□□□□ -0.47
RNF43-206ENST00000582293 OR1L4Q8NGR5 311 aa12.09□□□□□ -0.47
RNF43-206ENST00000582293 C20orf173Q96LM9 149 aa12.09□□□□□ -0.47
RNF43-206ENST00000582293 TENM3Q9P273 2699 aa12.08□□□□□ -0.48
RNF43-206ENST00000582293 A0A087X0K7 114 aa12.08□□□□□ -0.48
RNF43-206ENST00000582293 KNCNA6PVL3 124 aa12.08□□□□□ -0.48
RNF43-206ENST00000582293 RPL7P18124 248 aaKnown RBP12.08□□□□□ -0.48
RNF43-206ENST00000582293 S100A7P31151 101 aa12.08□□□□□ -0.48
RNF43-206ENST00000582293 SPATA31B1PQ5VZV4 182 aa12.08□□□□□ -0.48
RNF43-206ENST00000582293 GATAD1Q8WUU5 269 aa12.08□□□□□ -0.48
RNF43-206ENST00000582293 ST6GAL2Q96JF0 529 aa12.08□□□□□ -0.48
RNF43-206ENST00000582293 PFDN5Q99471 154 aa12.08□□□□□ -0.48
RNF43-206ENST00000582293 RETNQ9HD89 108 aa12.08□□□□□ -0.48
RNF43-206ENST00000582293 IFNA5P01569 189 aa12.07□□□□□ -0.48
RNF43-206ENST00000582293 SNRPCP09234 159 aaKnown RBP12.07□□□□□ -0.48
RNF43-206ENST00000582293 IGLC2P0DOY2 106 aa12.07□□□□□ -0.48
RNF43-206ENST00000582293 RPL35AP18077 110 aaKnown RBP12.07□□□□□ -0.48
RNF43-206ENST00000582293 PSMB3P49720 205 aa12.07□□□□□ -0.48
RNF43-206ENST00000582293 GDF5OSQ5U4N7 250 aa12.07□□□□□ -0.48
RNF43-206ENST00000582293 IGFL4Q6B9Z1 124 aa12.07□□□□□ -0.48
RNF43-206ENST00000582293 C17orf112F2Z3M2 114 aa12.06□□□□□ -0.48
RNF43-206ENST00000582293 H3BQ15 152 aa12.06□□□□□ -0.48
RNF43-206ENST00000582293 ISLRO14498 428 aa12.06□□□□□ -0.48
RNF43-206ENST00000582293 ARPC5O15511 151 aa12.06□□□□□ -0.48
RNF43-206ENST00000582293 HLA-DMBP28068 263 aa12.06□□□□□ -0.48
RNF43-206ENST00000582293 MEOX2P50222 304 aa12.06□□□□□ -0.48
RNF43-206ENST00000582293 SNRPD3P62318 126 aaKnown RBP12.06□□□□□ -0.48
RNF43-206ENST00000582293 MIR17HGQ75NE6 70 aa12.06□□□□□ -0.48
RNF43-206ENST00000582293 TRPT1Q86TN4 253 aaKnown RBP12.06□□□□□ -0.48
RNF43-206ENST00000582293 ZNF709Q8N972 641 aa12.06□□□□□ -0.48
RNF43-206ENST00000582293 INO80EQ8NBZ0 244 aaPredicted RBP12.06□□□□□ -0.48
RNF43-206ENST00000582293 SCGB1C1Q8TD33 95 aa12.06□□□□□ -0.48
RNF43-206ENST00000582293 FAM167A-AS1Q96KT0 104 aa12.06□□□□□ -0.48
RNF43-206ENST00000582293 AGRNO00468 2067 aa12.06□□□□□ -0.48
RNF43-206ENST00000582293 GIG44P09565 113 aaPredicted RBP12.05□□□□□ -0.48
RNF43-206ENST00000582293 ATF4P18848 351 aaPredicted RBP12.05□□□□□ -0.48
RNF43-206ENST00000582293 ACTL10Q5JWF8 245 aa12.05□□□□□ -0.48
RNF43-206ENST00000582293 FFAR4Q5NUL3 377 aa12.05□□□□□ -0.48
RNF43-206ENST00000582293 FAM78BQ5VT40 261 aa12.05□□□□□ -0.48
RNF43-206ENST00000582293 RPL7L1Q6DKI1 246 aaKnown RBP12.05□□□□□ -0.48
RNF43-206ENST00000582293 S100A7AQ86SG5 101 aa12.05□□□□□ -0.48
RNF43-206ENST00000582293 C16orf92Q96LL3 132 aa12.05□□□□□ -0.48
RNF43-206ENST00000582293 LINC00052Q96N35 136 aa12.05□□□□□ -0.48
RNF43-206ENST00000582293 SLC25A2Q9BXI2 301 aa12.05□□□□□ -0.48
RNF43-206ENST00000582293 CYTL1Q9NRR1 136 aa12.05□□□□□ -0.48
RNF43-206ENST00000582293 KCNIP2Q9NS61 270 aa12.05□□□□□ -0.48
RNF43-206ENST00000582293 TIMM9Q9Y5J7 89 aa12.05□□□□□ -0.48
RNF43-206ENST00000582293 hCG_2014768A0A024R1R8 64 aa12.04□□□□□ -0.48
RNF43-206ENST00000582293 KIR2DL5BA0A0G2JN68 375 aa12.04□□□□□ -0.48
RNF43-206ENST00000582293 KIR2DL5BA0A0G2JPC4 375 aa12.04□□□□□ -0.48
RNF43-206ENST00000582293 A0A1B0GVG6 124 aa12.04□□□□□ -0.48
RNF43-206ENST00000582293 H3BTX0 84 aa12.04□□□□□ -0.48
RNF43-206ENST00000582293 SLC17A3O00476 420 aa12.04□□□□□ -0.48
RNF43-206ENST00000582293 ATP6V0CP27449 155 aa12.04□□□□□ -0.48
RNF43-206ENST00000582293 ZNF266Q14584 549 aa12.04□□□□□ -0.48
RNF43-206ENST00000582293 BPIFA4PQ86YQ2 179 aa12.04□□□□□ -0.48
RNF43-206ENST00000582293 KIR2DL5AQ8N109 375 aa12.04□□□□□ -0.48
RNF43-206ENST00000582293 RNF182Q8N6D2 247 aa12.04□□□□□ -0.48
RNF43-206ENST00000582293 HSD17B11Q8NBQ5 300 aa12.04□□□□□ -0.48
RNF43-206ENST00000582293 KIR2DL5BQ8NHK3 375 aa12.04□□□□□ -0.48
RNF43-206ENST00000582293 SAT2Q96F10 170 aaPredicted RBP12.04□□□□□ -0.48
RNF43-206ENST00000582293 RCHY1Q96PM5 261 aa12.04□□□□□ -0.48
RNF43-206ENST00000582293 SPATA25Q9BR10 227 aa12.04□□□□□ -0.48
RNF43-206ENST00000582293 MFFQ9GZY8 342 aa12.04□□□□□ -0.48
RNF43-206ENST00000582293 ZNF586Q9NXT0 402 aa12.04□□□□□ -0.48
RNF43-206ENST00000582293 U3KQK5 164 aa12.04□□□□□ -0.48
RNF43-206ENST00000582293 F6UB75 175 aa12.03□□□□□ -0.48
RNF43-206ENST00000582293 H3BMM0 161 aa12.03□□□□□ -0.48
RNF43-206ENST00000582293 EIF3GO75821 320 aaKnown RBP eCLIP12.03□□□□□ -0.48
RNF43-206ENST00000582293 PYYP10082 97 aa12.03□□□□□ -0.48
RNF43-206ENST00000582293 ID1P41134 155 aa12.03□□□□□ -0.48
RNF43-206ENST00000582293 ZNF503Q96F45 646 aa12.03□□□□□ -0.48
RNF43-206ENST00000582293 SH3BGRL3Q9H299 93 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms