RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 DAD1P61803 113 aa5.14□□□□□ -1.59
CDK5RAP3-221ENST00000581662 SUPT4H1P63272 117 aaKnown RBP5.14□□□□□ -1.59
CDK5RAP3-221ENST00000581662 CLINT1Q14677 625 aa5.14□□□□□ -1.59
CDK5RAP3-221ENST00000581662 NEDD8Q15843 81 aa5.14□□□□□ -1.59
CDK5RAP3-221ENST00000581662 FAM78BQ5VT40 261 aa5.14□□□□□ -1.59
CDK5RAP3-221ENST00000581662 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.14□□□□□ -1.59
CDK5RAP3-221ENST00000581662 BAP18Q8IXM2 172 aa5.14□□□□□ -1.59
CDK5RAP3-221ENST00000581662 CMTM1Q8IZ96 169 aa5.14□□□□□ -1.59
CDK5RAP3-221ENST00000581662 SELENOHQ8IZQ5 122 aaKnown RBP5.14□□□□□ -1.59
CDK5RAP3-221ENST00000581662 SLC35G3Q8N808 338 aa5.14□□□□□ -1.59
CDK5RAP3-221ENST00000581662 OR1S2Q8NGQ3 325 aa5.14□□□□□ -1.59
CDK5RAP3-221ENST00000581662 OR52E5Q8NH55 327 aa5.14□□□□□ -1.59
CDK5RAP3-221ENST00000581662 OR52I2Q8NH67 350 aa5.14□□□□□ -1.59
CDK5RAP3-221ENST00000581662 NPIPB3Q92617 1050 aa5.14□□□□□ -1.59
CDK5RAP3-221ENST00000581662 TMEM222Q9H0R3 208 aa5.14□□□□□ -1.59
CDK5RAP3-221ENST00000581662 VCX3BQ9H321 246 aa5.14□□□□□ -1.59
CDK5RAP3-221ENST00000581662 DIABLOQ9NR28 239 aa5.14□□□□□ -1.59
CDK5RAP3-221ENST00000581662 A0A1W2PS18 150 aa5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 ZNF705GA8MUZ8 300 aaPredicted RBP5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 M0R2Z0 102 aa5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 CORTO00230 105 aa5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 MRPS12O15235 138 aaKnown RBP5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 HPGDSO60760 199 aa5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 PRSS3P35030 304 aa5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 RCVRNP35243 200 aa5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 HOXA1P49639 335 aaPredicted RBP5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 RORCP51449 518 aa5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 LSM3P62310 102 aaKnown RBP5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 ERHP84090 104 aaKnown RBP5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 SNX29P2Q8IUI4 249 aa5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 ARL6IP6Q8N6S5 226 aa5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 ZBTB8BQ8NAP8 495 aaPredicted RBP5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 SLC24A4Q8NFF2 622 aa5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 OR11H7Q8NGC8 314 aa5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 MARCH1Q8TCQ1 289 aa5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 BORCS5Q969J3 196 aa5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 IL22RA2Q969J5 263 aa5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 ZNF486Q96H40 463 aaPredicted RBP5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 SLC25A32Q9H2D1 315 aa5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 TMEM231Q9H6L2 316 aa5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 SCPEP1Q9HB40 452 aa5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 RABL2AQ9UBK7 228 aaPredicted RBP5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 CACNG5Q9UF02 275 aa5.13□□□□□ -1.59
CDK5RAP3-221ENST00000581662 IGHV3OR16-12A0A075B7B8 117 aa5.12□□□□□ -1.59
CDK5RAP3-221ENST00000581662 PITX3O75364 302 aa5.12□□□□□ -1.59
CDK5RAP3-221ENST00000581662 APOA1P02647 267 aa5.12□□□□□ -1.59
CDK5RAP3-221ENST00000581662 HTR2BP41595 481 aa5.12□□□□□ -1.59
CDK5RAP3-221ENST00000581662 PSMB3P49720 205 aa5.12□□□□□ -1.59
CDK5RAP3-221ENST00000581662 EIF2B2P49770 351 aaKnown RBP5.12□□□□□ -1.59
CDK5RAP3-221ENST00000581662 SPCS3P61009 180 aa5.12□□□□□ -1.59
CDK5RAP3-221ENST00000581662 GAMTQ14353 236 aa5.12□□□□□ -1.59
CDK5RAP3-221ENST00000581662 ESRGQ1W209 222 aa5.12□□□□□ -1.59
CDK5RAP3-221ENST00000581662 NFE4Q86UQ8 179 aa5.12□□□□□ -1.59
CDK5RAP3-221ENST00000581662 RNASE8Q8TDE3 154 aaKnown RBP5.12□□□□□ -1.59
CDK5RAP3-221ENST00000581662 RNASEH2CQ8TDP1 164 aaKnown RBP5.12□□□□□ -1.59
CDK5RAP3-221ENST00000581662 UHRF2Q96PU4 802 aa5.12□□□□□ -1.59
CDK5RAP3-221ENST00000581662 C1orf43Q9BWL3 253 aa5.12□□□□□ -1.59
CDK5RAP3-221ENST00000581662 C1QTNF4Q9BXJ3 329 aa5.12□□□□□ -1.59
CDK5RAP3-221ENST00000581662 HSPB7Q9UBY9 170 aa5.12□□□□□ -1.59
CDK5RAP3-221ENST00000581662 MTFP1Q9UDX5 166 aa5.12□□□□□ -1.59
CDK5RAP3-221ENST00000581662 CRYM-AS1A6NIL9 109 aa5.11□□□□□ -1.59
CDK5RAP3-221ENST00000581662 ATP6V1G2O95670 118 aa5.11□□□□□ -1.59
CDK5RAP3-221ENST00000581662 SMIM18P0DKX4 95 aa5.11□□□□□ -1.59
CDK5RAP3-221ENST00000581662 SLC25A4P12235 298 aa5.11□□□□□ -1.59
CDK5RAP3-221ENST00000581662 TSPOP30536 169 aa5.11□□□□□ -1.59
CDK5RAP3-221ENST00000581662 AKR1C2P52895 323 aa5.11□□□□□ -1.59
CDK5RAP3-221ENST00000581662 CTF1Q16619 201 aa5.11□□□□□ -1.59
CDK5RAP3-221ENST00000581662 SPINK13Q1W4C9 94 aa5.11□□□□□ -1.59
CDK5RAP3-221ENST00000581662 OR8G2PQ6IF36 304 aa5.11□□□□□ -1.59
CDK5RAP3-221ENST00000581662 RNF182Q8N6D2 247 aa5.11□□□□□ -1.59
CDK5RAP3-221ENST00000581662 THAP8Q8NA92 274 aa5.11□□□□□ -1.59
CDK5RAP3-221ENST00000581662 S100A16Q96FQ6 103 aaKnown RBP5.11□□□□□ -1.59
CDK5RAP3-221ENST00000581662 IGF2BP2-AS1Q96M15 143 aa5.11□□□□□ -1.59
CDK5RAP3-221ENST00000581662 GPR132Q9UNW8 380 aa5.11□□□□□ -1.59
CDK5RAP3-221ENST00000581662 TMEM56-RWDD3S4R434 201 aa5.11□□□□□ -1.59
CDK5RAP3-221ENST00000581662 TRAV30A0A087WSZ9 112 aa5.1□□□□□ -1.59
CDK5RAP3-221ENST00000581662 LRCOL1A6NCL2 159 aa5.1□□□□□ -1.59
CDK5RAP3-221ENST00000581662 GATA2P23769 480 aaPredicted RBP5.1□□□□□ -1.59
CDK5RAP3-221ENST00000581662 SNCAP37840 140 aa5.1□□□□□ -1.59
CDK5RAP3-221ENST00000581662 CNN1P51911 297 aaKnown RBP5.1□□□□□ -1.59
CDK5RAP3-221ENST00000581662 VBP1P61758 197 aa5.1□□□□□ -1.59
CDK5RAP3-221ENST00000581662 PSG9Q00887 426 aa5.1□□□□□ -1.59
CDK5RAP3-221ENST00000581662 Q6ZRU5 148 aa5.1□□□□□ -1.59
CDK5RAP3-221ENST00000581662 FAM219AQ8IW50 185 aa5.1□□□□□ -1.59
CDK5RAP3-221ENST00000581662 TSPAN14Q8NG11 270 aa5.1□□□□□ -1.59
CDK5RAP3-221ENST00000581662 RBPMSQ93062 196 aaKnown RBP5.1□□□□□ -1.59
CDK5RAP3-221ENST00000581662 RPL36ALQ969Q0 106 aaKnown RBP5.1□□□□□ -1.59
CDK5RAP3-221ENST00000581662 ACY3Q96HD9 319 aa5.1□□□□□ -1.59
CDK5RAP3-221ENST00000581662 VSIG2Q96IQ7 327 aa5.1□□□□□ -1.59
CDK5RAP3-221ENST00000581662 PARD6GQ9BYG4 376 aaPredicted RBP5.1□□□□□ -1.59
CDK5RAP3-221ENST00000581662 RBKSQ9H477 322 aa5.1□□□□□ -1.59
CDK5RAP3-221ENST00000581662 NAA60Q9H7X0 242 aa5.1□□□□□ -1.59
CDK5RAP3-221ENST00000581662 PAIP2BQ9ULR5 123 aaKnown RBP5.1□□□□□ -1.59
CDK5RAP3-221ENST00000581662 TRAV12-2A0A075B6T6 113 aa5.09□□□□□ -1.59
CDK5RAP3-221ENST00000581662 TEX13DA0A0J9YY54 714 aaPredicted RBP5.09□□□□□ -1.59
CDK5RAP3-221ENST00000581662 PMS2P5A8MQ11 134 aa5.09□□□□□ -1.59
CDK5RAP3-221ENST00000581662 F5H768 121 aa5.09□□□□□ -1.59
CDK5RAP3-221ENST00000581662 H3BRN7 92 aa5.09□□□□□ -1.59
CDK5RAP3-221ENST00000581662 ISLRO14498 428 aa5.09□□□□□ -1.59
CDK5RAP3-221ENST00000581662 RD3LP0DJH9 198 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 200.8 ms