RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 ZNF48Q96MX3 618 aaPredicted RBP11.85□□□□□ -0.51
CSNK1D-217ENST00000581241 C9orf118A6NHY6 69 aa11.85□□□□□ -0.51
CSNK1D-217ENST00000581241 OOSP1A8MZH6 123 aa11.85□□□□□ -0.51
CSNK1D-217ENST00000581241 LILRA1O75019 489 aa11.85□□□□□ -0.51
CSNK1D-217ENST00000581241 FOXG1P55316 489 aaPredicted RBP11.85□□□□□ -0.51
CSNK1D-217ENST00000581241 DEFB104AQ8WTQ1 72 aa11.85□□□□□ -0.51
CSNK1D-217ENST00000581241 KLF12Q9Y4X4 402 aa11.85□□□□□ -0.51
CSNK1D-217ENST00000581241 SELLP14151 372 aa11.85□□□□□ -0.51
CSNK1D-217ENST00000581241 ZNF581Q9P0T4 197 aa11.85□□□□□ -0.51
CSNK1D-217ENST00000581241 FAM223BA6NKX1 122 aa11.85□□□□□ -0.51
CSNK1D-217ENST00000581241 BUB1B-PAK6H3BSN5 160 aa11.85□□□□□ -0.51
CSNK1D-217ENST00000581241 RPL36AP83881 106 aaKnown RBP11.85□□□□□ -0.51
CSNK1D-217ENST00000581241 KLRD1Q13241 179 aa11.85□□□□□ -0.51
CSNK1D-217ENST00000581241 FAM223AQ8IWN6 122 aa11.85□□□□□ -0.51
CSNK1D-217ENST00000581241 C14orf178Q8N769 122 aaPredicted RBP11.85□□□□□ -0.51
CSNK1D-217ENST00000581241 RPL36ALQ969Q0 106 aaKnown RBP11.85□□□□□ -0.51
CSNK1D-217ENST00000581241 LIME1Q9H400 295 aa11.84□□□□□ -0.51
CSNK1D-217ENST00000581241 SRRM4A7MD48 611 aaKnown RBP11.84□□□□□ -0.51
CSNK1D-217ENST00000581241 H3BMM0 161 aa11.84□□□□□ -0.51
CSNK1D-217ENST00000581241 ASCL4Q6XD76 172 aa11.84□□□□□ -0.51
CSNK1D-217ENST00000581241 UBE2WQ96B02 151 aa11.84□□□□□ -0.51
CSNK1D-217ENST00000581241 TRAV40A0A0B4J280 105 aa11.84□□□□□ -0.51
CSNK1D-217ENST00000581241 C10orf91Q5T1B1 145 aa11.84□□□□□ -0.51
CSNK1D-217ENST00000581241 C9JQL5 133 aa11.84□□□□□ -0.51
CSNK1D-217ENST00000581241 FOXL2NBQ6ZUU3 175 aa11.84□□□□□ -0.51
CSNK1D-217ENST00000581241 SNHG12Q9BXW3 62 aa11.84□□□□□ -0.51
CSNK1D-217ENST00000581241 GREB1Q4ZG55 1949 aa11.84□□□□□ -0.51
CSNK1D-217ENST00000581241 SRSF8Q9BRL6 282 aaKnown RBP11.83□□□□□ -0.51
CSNK1D-217ENST00000581241 SIP14410 1827 aa11.83□□□□□ -0.52
CSNK1D-217ENST00000581241 STPG4Q8N801 248 aa11.83□□□□□ -0.52
CSNK1D-217ENST00000581241 M0R1W7 72 aa11.83□□□□□ -0.52
CSNK1D-217ENST00000581241 IGHV2-70P01814 119 aa11.83□□□□□ -0.52
CSNK1D-217ENST00000581241 ZNF672Q499Z4 452 aaPredicted RBP11.83□□□□□ -0.52
CSNK1D-217ENST00000581241 C18orf32Q8TCD1 76 aa11.83□□□□□ -0.52
CSNK1D-217ENST00000581241 SHANK2-AS3Q9BTD1 123 aa11.83□□□□□ -0.52
CSNK1D-217ENST00000581241 NDPQ00604 133 aa11.83□□□□□ -0.52
CSNK1D-217ENST00000581241 SIGLEC9Q9Y336 463 aa11.83□□□□□ -0.52
CSNK1D-217ENST00000581241 LINC00527Q9UJ94 153 aa11.82□□□□□ -0.52
CSNK1D-217ENST00000581241 PRSS46E5RG02 174 aa11.82□□□□□ -0.52
CSNK1D-217ENST00000581241 IL18BPO95998 194 aa11.82□□□□□ -0.52
CSNK1D-217ENST00000581241 PFN1P07737 140 aaKnown RBP11.82□□□□□ -0.52
CSNK1D-217ENST00000581241 IGFL4Q6B9Z1 124 aa11.82□□□□□ -0.52
CSNK1D-217ENST00000581241 TMEM141Q96I45 108 aa11.82□□□□□ -0.52
CSNK1D-217ENST00000581241 C5orf64Q2M2E5 130 aa11.82□□□□□ -0.52
CSNK1D-217ENST00000581241 NEGR1Q7Z3B1 354 aa11.82□□□□□ -0.52
CSNK1D-217ENST00000581241 MESP1Q9BRJ9 268 aa11.82□□□□□ -0.52
CSNK1D-217ENST00000581241 NTN3O00634 580 aaPredicted RBP11.82□□□□□ -0.52
CSNK1D-217ENST00000581241 E9PLN8 166 aa11.81□□□□□ -0.52
CSNK1D-217ENST00000581241 ARMS2P0C7Q2 107 aa11.81□□□□□ -0.52
CSNK1D-217ENST00000581241 CT83Q5H943 113 aa11.81□□□□□ -0.52
CSNK1D-217ENST00000581241 Q6ZRM9 215 aa11.81□□□□□ -0.52
CSNK1D-217ENST00000581241 PDE6HQ13956 83 aa11.81□□□□□ -0.52
CSNK1D-217ENST00000581241 C3orf36Q3SXR2 165 aa11.81□□□□□ -0.52
CSNK1D-217ENST00000581241 LY6G5BQ8NDX9 201 aa11.81□□□□□ -0.52
CSNK1D-217ENST00000581241 C9orf153Q5TBE3 101 aa11.81□□□□□ -0.52
CSNK1D-217ENST00000581241 C20orf204Q6ZNR8 217 aa11.81□□□□□ -0.52
CSNK1D-217ENST00000581241 LCNL1Q6ZST4 164 aa11.81□□□□□ -0.52
CSNK1D-217ENST00000581241 TRPT1Q86TN4 253 aaKnown RBP11.81□□□□□ -0.52
CSNK1D-217ENST00000581241 Q8N8P6 123 aa11.81□□□□□ -0.52
CSNK1D-217ENST00000581241 C8orf49Q96NF6 230 aa11.81□□□□□ -0.52
CSNK1D-217ENST00000581241 ANAPC10Q9UM13 185 aa11.81□□□□□ -0.52
CSNK1D-217ENST00000581241 IGKV1D-17A0A075B6S4 117 aa11.81□□□□□ -0.52
CSNK1D-217ENST00000581241 TRGV1A0A0A0MS02 117 aa11.81□□□□□ -0.52
CSNK1D-217ENST00000581241 SPXQ9BT56 116 aa11.81□□□□□ -0.52
CSNK1D-217ENST00000581241 K7EP34 96 aa11.8□□□□□ -0.52
CSNK1D-217ENST00000581241 PRDM6Q9NQX0 595 aa11.8□□□□□ -0.52
CSNK1D-217ENST00000581241 SMIM27A0A1W2PRY6 76 aa11.8□□□□□ -0.52
CSNK1D-217ENST00000581241 FCN3O75636 299 aa11.8□□□□□ -0.52
CSNK1D-217ENST00000581241 GAGE1Q13065 139 aa11.8□□□□□ -0.52
CSNK1D-217ENST00000581241 USMG5Q96IX5 58 aa11.8□□□□□ -0.52
CSNK1D-217ENST00000581241 A0A1B0GUS0 222 aa11.8□□□□□ -0.52
CSNK1D-217ENST00000581241 F8W1H4 67 aa11.8□□□□□ -0.52
CSNK1D-217ENST00000581241 TMEM219Q86XT9 240 aa11.8□□□□□ -0.52
CSNK1D-217ENST00000581241 CDK2AP2O75956 126 aa11.8□□□□□ -0.52
CSNK1D-217ENST00000581241 ZSWIM8A7E2V4 1837 aa11.8□□□□□ -0.52
CSNK1D-217ENST00000581241 LINC00205P59089 165 aa11.8□□□□□ -0.52
CSNK1D-217ENST00000581241 KLHDC3Q9BQ90 382 aa11.8□□□□□ -0.52
CSNK1D-217ENST00000581241 TCF15Q12870 199 aa11.79□□□□□ -0.52
CSNK1D-217ENST00000581241 NSUN5P1Q3KNT7 163 aa11.79□□□□□ -0.52
CSNK1D-217ENST00000581241 TDRD6O60522 2096 aaKnown RBP11.79□□□□□ -0.52
CSNK1D-217ENST00000581241 TRBV20-1A0A075B6N2 111 aa11.79□□□□□ -0.52
CSNK1D-217ENST00000581241 A0A087WWL8 130 aa11.79□□□□□ -0.52
CSNK1D-217ENST00000581241 DSCR9P59020 149 aa11.79□□□□□ -0.52
CSNK1D-217ENST00000581241 Q6ZWC4 215 aa11.79□□□□□ -0.52
CSNK1D-217ENST00000581241 LINC00479Q96M42 142 aa11.79□□□□□ -0.52
CSNK1D-217ENST00000581241 RSPO3Q9BXY4 272 aaPredicted RBP11.79□□□□□ -0.52
CSNK1D-217ENST00000581241 INSP01308 110 aa11.79□□□□□ -0.52
CSNK1D-217ENST00000581241 TMEM213A2RRL7 107 aa11.78□□□□□ -0.52
CSNK1D-217ENST00000581241 SPANXDQ9BXN6 97 aa11.78□□□□□ -0.52
CSNK1D-217ENST00000581241 CFHR2P36980 270 aa11.78□□□□□ -0.52
CSNK1D-217ENST00000581241 TSSC4Q9Y5U2 329 aaPredicted RBP11.78□□□□□ -0.52
CSNK1D-217ENST00000581241 SPAG17Q6Q759 2223 aa11.78□□□□□ -0.52
CSNK1D-217ENST00000581241 IGHV1-24A0A0C4DH33 117 aa11.78□□□□□ -0.52
CSNK1D-217ENST00000581241 IGLC2P0DOY2 106 aa11.78□□□□□ -0.52
CSNK1D-217ENST00000581241 IGLC3P0DOY3 106 aa11.78□□□□□ -0.52
CSNK1D-217ENST00000581241 Q0VFX4 171 aa11.78□□□□□ -0.52
CSNK1D-217ENST00000581241 C6orf226Q5I0X4 101 aa11.78□□□□□ -0.52
CSNK1D-217ENST00000581241 IGHV2-5P01817 119 aa11.77□□□□□ -0.52
CSNK1D-217ENST00000581241 NPSP0C0P6 89 aa11.77□□□□□ -0.52
CSNK1D-217ENST00000581241 B3GALT5-AS1P59052 145 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms