RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 CXorf1O96002 111 aa8.17□□□□□ -1.1
SS18-213ENST00000579640 RPL7P18124 248 aaKnown RBP8.17□□□□□ -1.1
SS18-213ENST00000579640 CLLU1Q5K131 121 aa8.17□□□□□ -1.1
SS18-213ENST00000579640 MORN5Q5VZ52 161 aa8.17□□□□□ -1.1
SS18-213ENST00000579640 LCN15Q6UWW0 184 aa8.17□□□□□ -1.1
SS18-213ENST00000579640 SSX7Q7RTT5 188 aa8.17□□□□□ -1.1
SS18-213ENST00000579640 BPIFA4PQ86YQ2 179 aa8.17□□□□□ -1.1
SS18-213ENST00000579640 OR8I2Q8N0Y5 310 aa8.17□□□□□ -1.1
SS18-213ENST00000579640 FAM167A-AS1Q96KT0 104 aa8.17□□□□□ -1.1
SS18-213ENST00000579640 ELOVL1Q9BW60 279 aa8.17□□□□□ -1.1
SS18-213ENST00000579640 RHPN1-AS1Q9BWJ2 59 aa8.17□□□□□ -1.1
SS18-213ENST00000579640 SLC25A2Q9BXI2 301 aa8.17□□□□□ -1.1
SS18-213ENST00000579640 TMEM14CQ9P0S9 112 aa8.17□□□□□ -1.1
SS18-213ENST00000579640 TRAV5A0A0B4J249 113 aa8.17□□□□□ -1.1
SS18-213ENST00000579640 CHEK1O14757 476 aa8.17□□□□□ -1.1
SS18-213ENST00000579640 OR7C2O60412 319 aa8.17□□□□□ -1.1
SS18-213ENST00000579640 CD5P06127 495 aa8.17□□□□□ -1.1
SS18-213ENST00000579640 NMBP08949 121 aa8.17□□□□□ -1.1
SS18-213ENST00000579640 CBLN1P23435 193 aa8.17□□□□□ -1.1
SS18-213ENST00000579640 C16orf54Q6UWD8 224 aa8.17□□□□□ -1.1
SS18-213ENST00000579640 LINC00482Q8N8I6 264 aa8.17□□□□□ -1.1
SS18-213ENST00000579640 OR51M1Q9H341 326 aa8.17□□□□□ -1.1
SS18-213ENST00000579640 SIGLEC8Q9NYZ4 499 aa8.17□□□□□ -1.1
SS18-213ENST00000579640 HELTA6NFD8 242 aa8.16□□□□□ -1.1
SS18-213ENST00000579640 HMGB3O15347 200 aaKnown RBP8.16□□□□□ -1.1
SS18-213ENST00000579640 APOHP02749 345 aaPredicted RBP8.16□□□□□ -1.1
SS18-213ENST00000579640 ARL14EPLP0DKL9 152 aa8.16□□□□□ -1.1
SS18-213ENST00000579640 FOLR2P14207 255 aa8.16□□□□□ -1.1
SS18-213ENST00000579640 GALR1P47211 349 aa8.16□□□□□ -1.1
SS18-213ENST00000579640 LEMD1Q68G75 181 aa8.16□□□□□ -1.1
SS18-213ENST00000579640 IL34Q6ZMJ4 242 aa8.16□□□□□ -1.1
SS18-213ENST00000579640 LYPD6BQ8NI32 183 aa8.16□□□□□ -1.1
SS18-213ENST00000579640 GLMPQ8WWB7 406 aa8.16□□□□□ -1.1
SS18-213ENST00000579640 PAXXQ9BUH6 204 aa8.16□□□□□ -1.1
SS18-213ENST00000579640 TMEM167BQ9NRX6 74 aa8.16□□□□□ -1.1
SS18-213ENST00000579640 IGHV3-49A0A0A0MS15 119 aa8.15□□□□□ -1.1
SS18-213ENST00000579640 CSN3P07498 182 aa8.15□□□□□ -1.1
SS18-213ENST00000579640 GP9P14770 177 aa8.15□□□□□ -1.1
SS18-213ENST00000579640 PSMB3P49720 205 aa8.15□□□□□ -1.1
SS18-213ENST00000579640 MEOX2P50222 304 aa8.15□□□□□ -1.1
SS18-213ENST00000579640 PPT1P50897 306 aa8.15□□□□□ -1.1
SS18-213ENST00000579640 FGF8P55075 233 aaPredicted RBP8.15□□□□□ -1.1
SS18-213ENST00000579640 FBN1P35555 2871 aaKnown RBP8.15□□□□□ -1.1
SS18-213ENST00000579640 IGHV3OR16-13A0A075B7E8 117 aa8.15□□□□□ -1.11
SS18-213ENST00000579640 IGHV3-74A0A0B4J1X5 117 aa8.15□□□□□ -1.11
SS18-213ENST00000579640 IGHV3-66A0A0C4DH42 116 aa8.15□□□□□ -1.11
SS18-213ENST00000579640 MRPS12O15235 138 aaKnown RBP8.15□□□□□ -1.11
SS18-213ENST00000579640 EIF3GO75821 320 aaKnown RBP eCLIP8.15□□□□□ -1.11
SS18-213ENST00000579640 HIST1H1EP10412 219 aaKnown RBP8.15□□□□□ -1.11
SS18-213ENST00000579640 GCHFRP30047 84 aa8.15□□□□□ -1.11
SS18-213ENST00000579640 UBE2L3P68036 154 aaKnown RBP8.15□□□□□ -1.11
SS18-213ENST00000579640 SIGLEC15Q6ZMC9 328 aa8.15□□□□□ -1.11
SS18-213ENST00000579640 SUN5Q8TC36 379 aa8.15□□□□□ -1.11
SS18-213ENST00000579640 ZNF503Q96F45 646 aa8.15□□□□□ -1.11
SS18-213ENST00000579640 A0A087X0K7 114 aa8.14□□□□□ -1.11
SS18-213ENST00000579640 PYYP10082 97 aa8.14□□□□□ -1.11
SS18-213ENST00000579640 ATF4P18848 351 aaPredicted RBP8.14□□□□□ -1.11
SS18-213ENST00000579640 PMS2P11Q13670 270 aa8.14□□□□□ -1.11
SS18-213ENST00000579640 GUK1Q16774 197 aa8.14□□□□□ -1.11
SS18-213ENST00000579640 DYNLRB2Q8TF09 96 aa8.14□□□□□ -1.11
SS18-213ENST00000579640 PCNPQ8WW12 178 aaKnown RBP8.14□□□□□ -1.11
SS18-213ENST00000579640 FXYD5Q96DB9 178 aa8.14□□□□□ -1.11
SS18-213ENST00000579640 HRH4Q9H3N8 390 aa8.14□□□□□ -1.11
SS18-213ENST00000579640 IFNA1P01562 189 aa8.13□□□□□ -1.11
SS18-213ENST00000579640 IGLC2P0DOY2 106 aa8.13□□□□□ -1.11
SS18-213ENST00000579640 EDN2P20800 178 aa8.13□□□□□ -1.11
SS18-213ENST00000579640 PDE6HQ13956 83 aa8.13□□□□□ -1.11
SS18-213ENST00000579640 ADAMTSL5Q6ZMM2 481 aa8.13□□□□□ -1.11
SS18-213ENST00000579640 IQCF2Q8IXL9 164 aa8.13□□□□□ -1.11
SS18-213ENST00000579640 MDFIQ99750 246 aa8.13□□□□□ -1.11
SS18-213ENST00000579640 MCRIP2Q9BUT9 160 aaKnown RBP8.13□□□□□ -1.11
SS18-213ENST00000579640 ARL2-SNX15V9GYD0 113 aa8.13□□□□□ -1.11
SS18-213ENST00000579640 TENM1Q9UKZ4 2725 aa8.13□□□□□ -1.11
SS18-213ENST00000579640 A0A1B0GV50 99 aa8.13□□□□□ -1.11
SS18-213ENST00000579640 ZNF785A8K8V0 405 aa8.13□□□□□ -1.11
SS18-213ENST00000579640 OR10J4P0C629 311 aa8.13□□□□□ -1.11
SS18-213ENST00000579640 NBEAP1P0C6P0 100 aa8.13□□□□□ -1.11
SS18-213ENST00000579640 TAGLN2P37802 199 aaKnown RBP8.13□□□□□ -1.11
SS18-213ENST00000579640 SAMD13Q5VXD3 122 aa8.13□□□□□ -1.11
SS18-213ENST00000579640 FAM90A2PQ658T7 463 aa8.13□□□□□ -1.11
SS18-213ENST00000579640 TCF24Q7RTU0 167 aa8.13□□□□□ -1.11
SS18-213ENST00000579640 WFDC9Q8NEX5 89 aa8.13□□□□□ -1.11
SS18-213ENST00000579640 TMPRSS5Q9H3S3 457 aa8.13□□□□□ -1.11
SS18-213ENST00000579640 MANBALQ9NQG1 85 aa8.13□□□□□ -1.11
SS18-213ENST00000579640 MLXQ9UH92 298 aa8.13□□□□□ -1.11
SS18-213ENST00000579640 SMAD5-AS1Q9Y6J3 95 aa8.13□□□□□ -1.11
SS18-213ENST00000579640 TRAV25A0A0B4J276 109 aa8.12□□□□□ -1.11
SS18-213ENST00000579640 ZNF253O75346 499 aa8.12□□□□□ -1.11
SS18-213ENST00000579640 SAP30O75446 220 aa8.12□□□□□ -1.11
SS18-213ENST00000579640 INSL3P51460 131 aa8.12□□□□□ -1.11
SS18-213ENST00000579640 CCL20P78556 96 aa8.12□□□□□ -1.11
SS18-213ENST00000579640 DEFB114Q30KQ6 69 aa8.12□□□□□ -1.11
SS18-213ENST00000579640 OR2K2Q8NGT1 345 aa8.12□□□□□ -1.11
SS18-213ENST00000579640 SPATA3Q8NHX4 192 aa8.12□□□□□ -1.11
SS18-213ENST00000579640 ZNF586Q9NXT0 402 aa8.12□□□□□ -1.11
SS18-213ENST00000579640 WNK1Q9H4A3 2382 aa8.12□□□□□ -1.11
SS18-213ENST00000579640 TRBV19A0A075B6N1 114 aa8.11□□□□□ -1.11
SS18-213ENST00000579640 A0A1W2PRE2 83 aa8.11□□□□□ -1.11
SS18-213ENST00000579640 H3BQ15 152 aa8.11□□□□□ -1.11
SS18-213ENST00000579640 CD33P20138 364 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms