RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 C10orf55Q5SWW7 151 aa8.76□□□□□ -1.01
SEC22B-201ENST00000578049 SIGLEC9Q9Y336 463 aa8.76□□□□□ -1.01
SEC22B-201ENST00000578049 CSRP1P21291 193 aaKnown RBP8.76□□□□□ -1.01
SEC22B-201ENST00000578049 C2orf82Q6UX34 121 aa8.76□□□□□ -1.01
SEC22B-201ENST00000578049 SPRR3Q9UBC9 169 aa8.76□□□□□ -1.01
SEC22B-201ENST00000578049 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.76□□□□□ -1.01
SEC22B-201ENST00000578049 WNT2P09544 360 aa8.76□□□□□ -1.01
SEC22B-201ENST00000578049 LGALS9BQ3B8N2 356 aa8.76□□□□□ -1.01
SEC22B-201ENST00000578049 LGALS9CQ6DKI2 356 aa8.76□□□□□ -1.01
SEC22B-201ENST00000578049 TEX43Q6ZNM6 134 aa8.76□□□□□ -1.01
SEC22B-201ENST00000578049 TMEM158Q8WZ71 300 aa8.76□□□□□ -1.01
SEC22B-201ENST00000578049 SIP14410 1827 aa8.76□□□□□ -1.01
SEC22B-201ENST00000578049 TRAV41A0A0B4J266 112 aa8.76□□□□□ -1.01
SEC22B-201ENST00000578049 IGHV1-24A0A0C4DH33 117 aa8.76□□□□□ -1.01
SEC22B-201ENST00000578049 C9orf118A6NHY6 69 aa8.76□□□□□ -1.01
SEC22B-201ENST00000578049 TMEM178BH3BS89 294 aa8.76□□□□□ -1.01
SEC22B-201ENST00000578049 PAX9P55771 341 aa8.76□□□□□ -1.01
SEC22B-201ENST00000578049 ITLN2Q8WWU7 325 aaPredicted RBP8.76□□□□□ -1.01
SEC22B-201ENST00000578049 PGPEP1Q9NXJ5 209 aa8.76□□□□□ -1.01
SEC22B-201ENST00000578049 SIVA1O15304 175 aa8.75□□□□□ -1.01
SEC22B-201ENST00000578049 VDAC2P45880 294 aaPredicted RBP8.75□□□□□ -1.01
SEC22B-201ENST00000578049 B3GALT5-AS1P59052 145 aa8.75□□□□□ -1.01
SEC22B-201ENST00000578049 TMEM14BQ9NUH8 114 aa8.75□□□□□ -1.01
SEC22B-201ENST00000578049 TRAV3A0A0B4J244 114 aa8.75□□□□□ -1.01
SEC22B-201ENST00000578049 MYMXA0A1B0GTQ4 84 aa8.75□□□□□ -1.01
SEC22B-201ENST00000578049 PRSS46E5RG02 174 aa8.75□□□□□ -1.01
SEC22B-201ENST00000578049 F8W1H4 67 aa8.75□□□□□ -1.01
SEC22B-201ENST00000578049 NCR2O95944 276 aa8.75□□□□□ -1.01
SEC22B-201ENST00000578049 THBDP07204 575 aa8.75□□□□□ -1.01
SEC22B-201ENST00000578049 TMEM200BQ69YZ2 307 aa8.75□□□□□ -1.01
SEC22B-201ENST00000578049 DNAJC30Q96LL9 226 aa8.75□□□□□ -1.01
SEC22B-201ENST00000578049 C7orf69Q9H7B7 122 aa8.75□□□□□ -1.01
SEC22B-201ENST00000578049 MDC1Q14676 2089 aaKnown RBP8.75□□□□□ -1.01
SEC22B-201ENST00000578049 PINLYPA6NC86 204 aa8.75□□□□□ -1.01
SEC22B-201ENST00000578049 C15orf32Q32M92 178 aa8.75□□□□□ -1.01
SEC22B-201ENST00000578049 ADAMTSL5Q6ZMM2 481 aa8.75□□□□□ -1.01
SEC22B-201ENST00000578049 USMG5Q96IX5 58 aa8.75□□□□□ -1.01
SEC22B-201ENST00000578049 TMEM8BA6NDV4 472 aa8.75□□□□□ -1.01
SEC22B-201ENST00000578049 LILRA1O75019 489 aa8.75□□□□□ -1.01
SEC22B-201ENST00000578049 INAFM2P0DMQ5 153 aa8.75□□□□□ -1.01
SEC22B-201ENST00000578049 FAM104BQ5XKR9 115 aa8.75□□□□□ -1.01
SEC22B-201ENST00000578049 SFTA2Q6UW10 78 aa8.75□□□□□ -1.01
SEC22B-201ENST00000578049 ABCA7Q8IZY2 2146 aa8.75□□□□□ -1.01
SEC22B-201ENST00000578049 DOPEY2Q9Y3R5 2298 aa8.74□□□□□ -1.01
SEC22B-201ENST00000578049 IGKV2-40A0A087WW87 121 aaPredicted RBP8.74□□□□□ -1.01
SEC22B-201ENST00000578049 IGKV1-6A0A0C4DH72 117 aa8.74□□□□□ -1.01
SEC22B-201ENST00000578049 IGKV2D-40P01614 121 aaPredicted RBP8.74□□□□□ -1.01
SEC22B-201ENST00000578049 COX8AP10176 69 aa8.74□□□□□ -1.01
SEC22B-201ENST00000578049 FOXG1P55316 489 aaPredicted RBP8.74□□□□□ -1.01
SEC22B-201ENST00000578049 GTSF1LQ9H1H1 148 aa8.74□□□□□ -1.01
SEC22B-201ENST00000578049 SPINK8P0C7L1 97 aa8.74□□□□□ -1.01
SEC22B-201ENST00000578049 PPIFP30405 207 aaKnown RBP8.74□□□□□ -1.01
SEC22B-201ENST00000578049 IGHV3OR16-8A0A075B7F1 116 aa8.74□□□□□ -1.01
SEC22B-201ENST00000578049 LY6G5BQ8NDX9 201 aa8.74□□□□□ -1.01
SEC22B-201ENST00000578049 PPDPFLQ8WWR9 84 aa8.74□□□□□ -1.01
SEC22B-201ENST00000578049 MPDZO75970 2070 aa8.74□□□□□ -1.01
SEC22B-201ENST00000578049 IGHG3P01860 377 aa8.74□□□□□ -1.01
SEC22B-201ENST00000578049 C5orf63A6NC05 138 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 RNF144BQ7Z419 303 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 GAFA1Q96PS6 74 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 PYGO2Q9BRQ0 406 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 V9GYV3 84 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 MBD3L4A6NDZ8 208 aaPredicted RBP8.73□□□□□ -1.01
SEC22B-201ENST00000578049 MBD3L3A6NE82 208 aaPredicted RBP8.73□□□□□ -1.01
SEC22B-201ENST00000578049 MBD3L5A6NJ08 208 aaPredicted RBP8.73□□□□□ -1.01
SEC22B-201ENST00000578049 RPL36AP83881 106 aaKnown RBP8.73□□□□□ -1.01
SEC22B-201ENST00000578049 C3orf36Q3SXR2 165 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 DTX2Q86UW9 622 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 MBD3L2Q8NHZ7 208 aaPredicted RBP8.73□□□□□ -1.01
SEC22B-201ENST00000578049 RPL36ALQ969Q0 106 aaKnown RBP8.73□□□□□ -1.01
SEC22B-201ENST00000578049 TMEM141Q96I45 108 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 TMEM14CQ9P0S9 112 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 TP53BP1Q12888 1972 aaPredicted RBP8.73□□□□□ -1.01
SEC22B-201ENST00000578049 IGKV1D-17A0A075B6S4 117 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 TRAV8-1A0A0A6YYK1 113 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 SMIM27A0A1W2PRY6 76 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 HAX1O00165 279 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 TNFRSF6BO95407 300 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 IGHV3-11P01762 117 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 PF4P02776 101 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 SLAQ13239 276 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 Q8N8P6 123 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 MDS2Q8NDY4 140 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 ANK1P16157 1881 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 FAM223BA6NKX1 122 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 MLNRO43193 412 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 CD33P20138 364 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 ZNF876PQ49A33 203 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 Q6ZWC4 215 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 FAM223AQ8IWN6 122 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 AMN1Q8IY45 258 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 OR11H6Q8NGC7 330 aa8.73□□□□□ -1.01
SEC22B-201ENST00000578049 ROS1P08922 2347 aa8.72□□□□□ -1.01
SEC22B-201ENST00000578049 K7EP34 96 aa8.72□□□□□ -1.01
SEC22B-201ENST00000578049 KLF12Q9Y4X4 402 aa8.72□□□□□ -1.01
SEC22B-201ENST00000578049 LTBP1Q14766 1721 aa8.72□□□□□ -1.01
SEC22B-201ENST00000578049 ADARB2-AS1A8MUL3 147 aa8.72□□□□□ -1.01
SEC22B-201ENST00000578049 GATA4P43694 442 aa8.72□□□□□ -1.01
SEC22B-201ENST00000578049 PLAURQ03405 335 aa8.72□□□□□ -1.01
SEC22B-201ENST00000578049 STHQ8IWL8 128 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms