RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 PSMB3P49720 205 aa16.31■□□□□ 0.2
SMARCD2-206ENST00000577990 MEOX2P50222 304 aa16.31■□□□□ 0.2
SMARCD2-206ENST00000577990 ACTL10Q5JWF8 245 aa16.31■□□□□ 0.2
SMARCD2-206ENST00000577990 SAMD13Q5VXD3 122 aa16.31■□□□□ 0.2
SMARCD2-206ENST00000577990 OR5C1Q8NGR4 320 aa16.31■□□□□ 0.2
SMARCD2-206ENST00000577990 RNF126Q9BV68 326 aa16.31■□□□□ 0.2
SMARCD2-206ENST00000577990 MED28Q9H204 178 aa16.31■□□□□ 0.2
SMARCD2-206ENST00000577990 ARV1Q9H2C2 271 aa16.31■□□□□ 0.2
SMARCD2-206ENST00000577990 SACSQ9NZJ4 4579 aa16.3■□□□□ 0.2
SMARCD2-206ENST00000577990 TENM2Q9NT68 2774 aa16.3■□□□□ 0.2
SMARCD2-206ENST00000577990 SPRY2O43597 315 aa16.3■□□□□ 0.2
SMARCD2-206ENST00000577990 COX7A2P2O60397 106 aa16.3■□□□□ 0.2
SMARCD2-206ENST00000577990 CXCL3P19876 107 aa16.3■□□□□ 0.2
SMARCD2-206ENST00000577990 CASC10Q5T4H9 136 aa16.3■□□□□ 0.2
SMARCD2-206ENST00000577990 TRPT1Q86TN4 253 aaKnown RBP16.3■□□□□ 0.2
SMARCD2-206ENST00000577990 RSG1Q9BU20 258 aa16.3■□□□□ 0.2
SMARCD2-206ENST00000577990 STARD9Q9P2P6 4700 aa16.3■□□□□ 0.2
SMARCD2-206ENST00000577990 RPL7P18124 248 aaKnown RBP16.29■□□□□ 0.2
SMARCD2-206ENST00000577990 FGF7P21781 194 aa16.29■□□□□ 0.2
SMARCD2-206ENST00000577990 PRR20EP86478 221 aa16.29■□□□□ 0.2
SMARCD2-206ENST00000577990 PRR20CP86479 221 aa16.29■□□□□ 0.2
SMARCD2-206ENST00000577990 PRR20DP86480 221 aa16.29■□□□□ 0.2
SMARCD2-206ENST00000577990 PRR20BP86481 221 aa16.29■□□□□ 0.2
SMARCD2-206ENST00000577990 PRR20AP86496 221 aa16.29■□□□□ 0.2
SMARCD2-206ENST00000577990 OPCMLQ14982 345 aa16.29■□□□□ 0.2
SMARCD2-206ENST00000577990 FCN2Q15485 313 aa16.29■□□□□ 0.2
SMARCD2-206ENST00000577990 MIC13Q5XKP0 118 aa16.29■□□□□ 0.2
SMARCD2-206ENST00000577990 RNF183Q96D59 192 aa16.29■□□□□ 0.2
SMARCD2-206ENST00000577990 LINC00052Q96N35 136 aa16.29■□□□□ 0.2
SMARCD2-206ENST00000577990 MBD2Q9UBB5 411 aa16.29■□□□□ 0.2
SMARCD2-206ENST00000577990 RNF24Q9Y225 148 aa16.29■□□□□ 0.2
SMARCD2-206ENST00000577990 ISLRO14498 428 aa16.28■□□□□ 0.2
SMARCD2-206ENST00000577990 MPDU1O75352 247 aa16.28■□□□□ 0.2
SMARCD2-206ENST00000577990 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.28■□□□□ 0.2
SMARCD2-206ENST00000577990 Q6ZRG5 221 aa16.28■□□□□ 0.2
SMARCD2-206ENST00000577990 LINC00305Q7Z4B0 112 aa16.28■□□□□ 0.2
SMARCD2-206ENST00000577990 OR11H7Q8NGC8 314 aa16.28■□□□□ 0.2
SMARCD2-206ENST00000577990 CHAC2Q8WUX2 184 aa16.28■□□□□ 0.2
SMARCD2-206ENST00000577990 C17orf77Q96MU5 243 aa16.28■□□□□ 0.2
SMARCD2-206ENST00000577990 ELOA3CA0A087WX78 387 aaPredicted RBP16.27■□□□□ 0.2
SMARCD2-206ENST00000577990 CA1P00915 261 aaPredicted RBP16.27■□□□□ 0.2
SMARCD2-206ENST00000577990 ATF4P18848 351 aaPredicted RBP16.27■□□□□ 0.2
SMARCD2-206ENST00000577990 RPL29P47914 159 aaKnown RBP16.27■□□□□ 0.2
SMARCD2-206ENST00000577990 CLINT1Q14677 625 aa16.27■□□□□ 0.2
SMARCD2-206ENST00000577990 TMEM37Q8WXS4 190 aa16.27■□□□□ 0.2
SMARCD2-206ENST00000577990 C16orf92Q96LL3 132 aa16.27■□□□□ 0.2
SMARCD2-206ENST00000577990 RYR2Q92736 4967 aa16.26■□□□□ 0.19
SMARCD2-206ENST00000577990 SPP1P10451 314 aa16.26■□□□□ 0.19
SMARCD2-206ENST00000577990 LYL1P12980 280 aa16.26■□□□□ 0.19
SMARCD2-206ENST00000577990 B2MP61769 119 aa16.26■□□□□ 0.19
SMARCD2-206ENST00000577990 OXA1LQ15070 435 aa16.26■□□□□ 0.19
SMARCD2-206ENST00000577990 C10orf113Q5VZT2 155 aa16.26■□□□□ 0.19
SMARCD2-206ENST00000577990 MORN3Q6PF18 240 aaPredicted RBP16.26■□□□□ 0.19
SMARCD2-206ENST00000577990 OR1L4Q8NGR5 311 aa16.26■□□□□ 0.19
SMARCD2-206ENST00000577990 THAP6Q8TBB0 222 aa16.26■□□□□ 0.19
SMARCD2-206ENST00000577990 NPCDR1Q9BY65 106 aa16.26■□□□□ 0.19
SMARCD2-206ENST00000577990 SLC39A9Q9NUM3 307 aa16.26■□□□□ 0.19
SMARCD2-206ENST00000577990 HSPB11Q9Y547 144 aa16.26■□□□□ 0.19
SMARCD2-206ENST00000577990 PXMP4Q9Y6I8 212 aa16.26■□□□□ 0.19
SMARCD2-206ENST00000577990 ZFAND6Q6FIF0 208 aa16.25■□□□□ 0.19
SMARCD2-206ENST00000577990 DNAJC4Q9NNZ3 241 aa16.25■□□□□ 0.19
SMARCD2-206ENST00000577990 A0A087X0K7 114 aa16.24■□□□□ 0.19
SMARCD2-206ENST00000577990 H3BMM0 161 aa16.24■□□□□ 0.19
SMARCD2-206ENST00000577990 HLA-DRB4P13762 266 aa16.24■□□□□ 0.19
SMARCD2-206ENST00000577990 RPL12P30050 165 aaKnown RBP16.24■□□□□ 0.19
SMARCD2-206ENST00000577990 FGL1Q08830 312 aa16.24■□□□□ 0.19
SMARCD2-206ENST00000577990 FOXI2Q6ZQN5 318 aa16.24■□□□□ 0.19
SMARCD2-206ENST00000577990 GATAD1Q8WUU5 269 aa16.24■□□□□ 0.19
SMARCD2-206ENST00000577990 PFDN5Q99471 154 aa16.24■□□□□ 0.19
SMARCD2-206ENST00000577990 HLA-DRB4X5D2U9 266 aa16.24■□□□□ 0.19
SMARCD2-206ENST00000577990 DEFB1P60022 68 aa16.23■□□□□ 0.19
SMARCD2-206ENST00000577990 C20orf173Q96LM9 149 aa16.23■□□□□ 0.19
SMARCD2-206ENST00000577990 ATP5SQ99766 215 aa16.23■□□□□ 0.19
SMARCD2-206ENST00000577990 WDR61Q9GZS3 305 aaKnown RBP16.23■□□□□ 0.19
SMARCD2-206ENST00000577990 SAV1Q9H4B6 383 aaPredicted RBP16.23■□□□□ 0.19
SMARCD2-206ENST00000577990 MRPS12O15235 138 aaKnown RBP16.22■□□□□ 0.19
SMARCD2-206ENST00000577990 GIG44P09565 113 aaPredicted RBP16.22■□□□□ 0.19
SMARCD2-206ENST00000577990 C4BPBP20851 252 aa16.22■□□□□ 0.19
SMARCD2-206ENST00000577990 TMEM41BQ5BJD5 291 aa16.22■□□□□ 0.19
SMARCD2-206ENST00000577990 GDF5OSQ5U4N7 250 aa16.22■□□□□ 0.19
SMARCD2-206ENST00000577990 MORN5Q5VZ52 161 aa16.22■□□□□ 0.19
SMARCD2-206ENST00000577990 LYSTQ99698 3801 aa16.22■□□□□ 0.19
SMARCD2-206ENST00000577990 RPRMQ9NS64 109 aa16.22■□□□□ 0.19
SMARCD2-206ENST00000577990 TRAV8-2A0A0B4J237 113 aa16.21■□□□□ 0.19
SMARCD2-206ENST00000577990 GIPP09681 153 aaPredicted RBP16.21■□□□□ 0.19
SMARCD2-206ENST00000577990 BPIFA4PQ86YQ2 179 aa16.21■□□□□ 0.19
SMARCD2-206ENST00000577990 ASB13Q8WXK3 278 aa16.21■□□□□ 0.19
SMARCD2-206ENST00000577990 KCNIP2Q9NS61 270 aa16.21■□□□□ 0.19
SMARCD2-206ENST00000577990 SPATA31B1PQ5VZV4 182 aa16.2■□□□□ 0.18
SMARCD2-206ENST00000577990 IGFL4Q6B9Z1 124 aa16.2■□□□□ 0.18
SMARCD2-206ENST00000577990 EBLN2Q6P2I7 272 aa16.2■□□□□ 0.18
SMARCD2-206ENST00000577990 ZNF709Q8N972 641 aa16.2■□□□□ 0.18
SMARCD2-206ENST00000577990 SMIM3Q9BZL3 60 aa16.2■□□□□ 0.18
SMARCD2-206ENST00000577990 CXCL2P19875 107 aa16.19■□□□□ 0.18
SMARCD2-206ENST00000577990 NUTF2P61970 127 aaKnown RBP16.19■□□□□ 0.18
SMARCD2-206ENST00000577990 RARRES2Q99969 163 aa16.19■□□□□ 0.18
SMARCD2-206ENST00000577990 TRAV5A0A0B4J249 113 aa16.18■□□□□ 0.18
SMARCD2-206ENST00000577990 A0A0J9YWU9 116 aa16.18■□□□□ 0.18
SMARCD2-206ENST00000577990 F6UB75 175 aa16.18■□□□□ 0.18
SMARCD2-206ENST00000577990 IFNA5P01569 189 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms