RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 NPBWR2P48146 333 aa3.97□□□□□ -1.77
SF3B3-214ENST00000572365 HNRNPA3P51991 378 aaKnown RBP3.97□□□□□ -1.77
SF3B3-214ENST00000572365 FGF8P55075 233 aaPredicted RBP3.97□□□□□ -1.77
SF3B3-214ENST00000572365 ATP5IP56385 69 aaPredicted RBP3.97□□□□□ -1.77
SF3B3-214ENST00000572365 RPL18Q07020 188 aaKnown RBP3.97□□□□□ -1.77
SF3B3-214ENST00000572365 ATXN7L3Q14CW9 347 aaPredicted RBP3.97□□□□□ -1.77
SF3B3-214ENST00000572365 PRSS8Q16651 343 aa3.97□□□□□ -1.77
SF3B3-214ENST00000572365 SAMD13Q5VXD3 122 aa3.97□□□□□ -1.77
SF3B3-214ENST00000572365 FAM71F2Q6NXP2 309 aa3.97□□□□□ -1.77
SF3B3-214ENST00000572365 MRPL54Q6P161 138 aaKnown RBP3.97□□□□□ -1.77
SF3B3-214ENST00000572365 ACP7Q6ZNF0 438 aa3.97□□□□□ -1.77
SF3B3-214ENST00000572365 NIT1Q86X76 327 aa3.97□□□□□ -1.77
SF3B3-214ENST00000572365 RBM45Q8IUH3 476 aaKnown RBP3.97□□□□□ -1.77
SF3B3-214ENST00000572365 C11orf53Q8IXP5 236 aa3.97□□□□□ -1.77
SF3B3-214ENST00000572365 ZNF679Q8IYX0 411 aa3.97□□□□□ -1.77
SF3B3-214ENST00000572365 ZNF491Q8N8L2 437 aa3.97□□□□□ -1.77
SF3B3-214ENST00000572365 RPS4Y2Q8TD47 263 aa3.97□□□□□ -1.77
SF3B3-214ENST00000572365 TSEN15Q8WW01 171 aaKnown RBP3.97□□□□□ -1.77
SF3B3-214ENST00000572365 AQP3Q92482 292 aa3.97□□□□□ -1.77
SF3B3-214ENST00000572365 TOMM40LQ969M1 308 aa3.97□□□□□ -1.77
SF3B3-214ENST00000572365 DERL3Q96Q80 235 aa3.97□□□□□ -1.77
SF3B3-214ENST00000572365 OR52D1Q9H346 318 aa3.97□□□□□ -1.77
SF3B3-214ENST00000572365 CST9LQ9H4G1 147 aa3.97□□□□□ -1.77
SF3B3-214ENST00000572365 C14orf166Q9Y224 244 aaKnown RBP3.97□□□□□ -1.77
SF3B3-214ENST00000572365 MOB4Q9Y3A3 225 aa3.97□□□□□ -1.77
SF3B3-214ENST00000572365 WSB1Q9Y6I7 421 aa3.97□□□□□ -1.77
SF3B3-214ENST00000572365 PKD1P98161 4303 aa3.97□□□□□ -1.77
SF3B3-214ENST00000572365 DYNC1H1Q14204 4646 aaKnown RBP3.97□□□□□ -1.77
SF3B3-214ENST00000572365 FAT2Q9NYQ8 4349 aa3.97□□□□□ -1.77
SF3B3-214ENST00000572365 A0A087WUU8 490 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 A0A1B0GU03 582 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 TEX48A0A1B0GUV7 120 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 A6NIN4 97 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 RPL37AP8A6NKH3 93 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 OR5B21A6NL26 309 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 F5H5K5 113 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 GEMIN2O14893 280 aaKnown RBP3.96□□□□□ -1.78
SF3B3-214ENST00000572365 AGPAT2O15120 278 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 CCL25O15444 150 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 OR7C2O60412 319 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 FSTL3O95633 263 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 SRP19P09132 144 aaKnown RBP3.96□□□□□ -1.78
SF3B3-214ENST00000572365 OR13C7P0DN81 318 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 UCP1P25874 307 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 GNMTQ14749 295 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 VAMP3Q15836 100 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 RSPO1Q2MKA7 263 aaPredicted RBP3.96□□□□□ -1.78
SF3B3-214ENST00000572365 SNAI3Q3KNW1 292 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 LRRC10Q5BKY1 277 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 PDZD11Q5EBL8 140 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 C10orf128Q5T292 105 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 LINC00242Q5T6M2 205 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 C19orf35Q6ZS72 473 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 WDR86Q86TI4 376 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 ZNF695Q8IW36 515 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 SLC35F2Q8IXU6 374 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 CYB561A3Q8NBI2 242 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 CSNK1G2-AS1Q8NCQ2 148 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 OR10W1Q8NGF6 305 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 OR4X1Q8NH49 305 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 OR2AE1Q8NHA4 323 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 OR1F12Q8NHA8 337 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 PFN4Q8NHR9 129 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 EMG1Q92979 244 aaKnown RBP3.96□□□□□ -1.78
SF3B3-214ENST00000572365 FGGYQ96C11 551 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 SFRP2Q96HF1 295 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 SEC22AQ96IW7 307 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 TMEM56Q96MV1 263 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 AGMATQ9BSE5 352 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 RNF126Q9BV68 326 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 ISG20L2Q9H9L3 353 aaKnown RBP3.96□□□□□ -1.78
SF3B3-214ENST00000572365 GNB4Q9HAV0 340 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 ZNF586Q9NXT0 402 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 PEF1Q9UBV8 284 aaKnown RBP3.96□□□□□ -1.78
SF3B3-214ENST00000572365 RAB22AQ9UL26 194 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 OR51B2Q9Y5P1 312 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 TMEM56-RWDD3S4R434 201 aa3.96□□□□□ -1.78
SF3B3-214ENST00000572365 AGRNO00468 2067 aa3.95□□□□□ -1.78
SF3B3-214ENST00000572365 TRBV9A0A0B4J1U6 114 aa3.95□□□□□ -1.78
SF3B3-214ENST00000572365 A0A0B4J2E0 115 aa3.95□□□□□ -1.78
SF3B3-214ENST00000572365 A0A1B0GX12 115 aa3.95□□□□□ -1.78
SF3B3-214ENST00000572365 FOXI3A8MTJ6 420 aaPredicted RBP3.95□□□□□ -1.78
SF3B3-214ENST00000572365 H7BYZ3 331 aa3.95□□□□□ -1.78
SF3B3-214ENST00000572365 M0R1W7 72 aa3.95□□□□□ -1.78
SF3B3-214ENST00000572365 SLC17A3O00476 420 aa3.95□□□□□ -1.78
SF3B3-214ENST00000572365 HSD17B6O14756 317 aa3.95□□□□□ -1.78
SF3B3-214ENST00000572365 SOX15O60248 233 aa3.95□□□□□ -1.78
SF3B3-214ENST00000572365 HRASP01112 189 aa3.95□□□□□ -1.78
SF3B3-214ENST00000572365 CRYGCP07315 174 aa3.95□□□□□ -1.78
SF3B3-214ENST00000572365 CXCL1P09341 107 aa3.95□□□□□ -1.78
SF3B3-214ENST00000572365 PGA5P0DJD9 388 aa3.95□□□□□ -1.78
SF3B3-214ENST00000572365 CTLA4P16410 223 aa3.95□□□□□ -1.78
SF3B3-214ENST00000572365 CNTFRP26992 372 aa3.95□□□□□ -1.78
SF3B3-214ENST00000572365 S100GP29377 79 aa3.95□□□□□ -1.78
SF3B3-214ENST00000572365 GUCA1AP43080 201 aaPredicted RBP3.95□□□□□ -1.78
SF3B3-214ENST00000572365 OR3A4PP47883 348 aa3.95□□□□□ -1.78
SF3B3-214ENST00000572365 PIGPP57054 158 aa3.95□□□□□ -1.78
SF3B3-214ENST00000572365 TAS2R46P59540 309 aa3.95□□□□□ -1.78
SF3B3-214ENST00000572365 PCBD1P61457 104 aa3.95□□□□□ -1.78
SF3B3-214ENST00000572365 ZNF92Q03936 586 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms