RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, human

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-208	ENST00000567060	OR8I2	Q8N0Y5	310 aa		12.54	□□□□□ -0.4
CLN6-208	ENST00000567060	OR11H4	Q8NGC9	324 aa		12.54	□□□□□ -0.4
CLN6-208	ENST00000567060	ARPC5L	Q9BPX5	153 aa		12.54	□□□□□ -0.4
CLN6-208	ENST00000567060	IGHV3OR16-13	A0A075B7E8	117 aa		12.53	□□□□□ -0.4
CLN6-208	ENST00000567060	IGHV3-74	A0A0B4J1X5	117 aa		12.53	□□□□□ -0.4
CLN6-208	ENST00000567060	IZUMO1R	A6ND01	250 aa		12.53	□□□□□ -0.4
CLN6-208	ENST00000567060	GALR1	P47211	349 aa		12.53	□□□□□ -0.4
CLN6-208	ENST00000567060	EIF5A	P63241	154 aa	Known RBP	12.53	□□□□□ -0.4
CLN6-208	ENST00000567060	SERF2	P84101	59 aa		12.53	□□□□□ -0.4
CLN6-208	ENST00000567060	LINC00305	Q7Z4B0	112 aa		12.53	□□□□□ -0.4
CLN6-208	ENST00000567060	OR2G3	Q8NGZ4	309 aa		12.53	□□□□□ -0.4
CLN6-208	ENST00000567060	TMEM37	Q8WXS4	190 aa		12.53	□□□□□ -0.4
CLN6-208	ENST00000567060	DOK5	Q9P104	306 aa		12.53	□□□□□ -0.4
CLN6-208	ENST00000567060	DNAH1	Q9P2D7	4330 aa		12.52	□□□□□ -0.41
CLN6-208	ENST00000567060		A0A1B0GVG6	124 aa		12.52	□□□□□ -0.41
CLN6-208	ENST00000567060	KANTR	A0A1W2PQU2	76 aa		12.52	□□□□□ -0.41
CLN6-208	ENST00000567060	RPL11	P62913	178 aa	Known RBP	12.52	□□□□□ -0.41
CLN6-208	ENST00000567060	PATE2	Q6UY27	113 aa		12.52	□□□□□ -0.41
CLN6-208	ENST00000567060	MRPL32	Q9BYC8	188 aa	Known RBP	12.52	□□□□□ -0.41
CLN6-208	ENST00000567060	NRN1	Q9NPD7	142 aa		12.52	□□□□□ -0.41
CLN6-208	ENST00000567060	TENM2	Q9NT68	2774 aa		12.52	□□□□□ -0.41
CLN6-208	ENST00000567060	IGHV3-66	A0A0C4DH42	116 aa		12.51	□□□□□ -0.41
CLN6-208	ENST00000567060	DNASE2	O00115	360 aa	Predicted RBP	12.51	□□□□□ -0.41
CLN6-208	ENST00000567060	MB	P02144	154 aa		12.51	□□□□□ -0.41
CLN6-208	ENST00000567060	C4BPB	P20851	252 aa		12.51	□□□□□ -0.41
CLN6-208	ENST00000567060	RSG1	Q9BU20	258 aa		12.51	□□□□□ -0.41
CLN6-208	ENST00000567060	MS4A6A	Q9H2W1	248 aa		12.51	□□□□□ -0.41
CLN6-208	ENST00000567060	BCL2L11	O43521	198 aa		12.5	□□□□□ -0.41
CLN6-208	ENST00000567060	ACOT6	Q3I5F7	207 aa	Predicted RBP	12.5	□□□□□ -0.41
CLN6-208	ENST00000567060	FFAR4	Q5NUL3	377 aa		12.5	□□□□□ -0.41
CLN6-208	ENST00000567060	RPL7L1	Q6DKI1	246 aa	Known RBP	12.5	□□□□□ -0.41
CLN6-208	ENST00000567060	BPIFA4P	Q86YQ2	179 aa		12.5	□□□□□ -0.41
CLN6-208	ENST00000567060	STXBP6	Q8NFX7	210 aa		12.5	□□□□□ -0.41
CLN6-208	ENST00000567060	UHRF2	Q96PU4	802 aa		12.5	□□□□□ -0.41
CLN6-208	ENST00000567060	SLC25A22	Q9H936	323 aa		12.5	□□□□□ -0.41
CLN6-208	ENST00000567060	STAB2	Q8WWQ8	2551 aa		12.49	□□□□□ -0.41
CLN6-208	ENST00000567060		A8MZ25	164 aa		12.49	□□□□□ -0.41
CLN6-208	ENST00000567060		K7EQG2	157 aa		12.49	□□□□□ -0.41
CLN6-208	ENST00000567060	CXCL2	P19875	107 aa		12.49	□□□□□ -0.41
CLN6-208	ENST00000567060	M6PR	P20645	277 aa		12.49	□□□□□ -0.41
CLN6-208	ENST00000567060	ATP6V0C	P27449	155 aa		12.49	□□□□□ -0.41
CLN6-208	ENST00000567060	ZFP69	Q49AA0	526 aa		12.49	□□□□□ -0.41
CLN6-208	ENST00000567060	HSD17B11	Q8NBQ5	300 aa		12.49	□□□□□ -0.41
CLN6-208	ENST00000567060	DCANP1	Q8TF63	244 aa		12.49	□□□□□ -0.41
CLN6-208	ENST00000567060	PRR25	Q96S07	402 aa		12.49	□□□□□ -0.41
CLN6-208	ENST00000567060	SCRT1	Q9BWW7	348 aa		12.49	□□□□□ -0.41
CLN6-208	ENST00000567060	SLC25A32	Q9H2D1	315 aa		12.49	□□□□□ -0.41
CLN6-208	ENST00000567060	LYST	Q99698	3801 aa		12.49	□□□□□ -0.41
CLN6-208	ENST00000567060		A0A087X0K7	114 aa		12.48	□□□□□ -0.41
CLN6-208	ENST00000567060	PFDN1	O60925	122 aa		12.48	□□□□□ -0.41
CLN6-208	ENST00000567060	CD81	P60033	236 aa		12.48	□□□□□ -0.41
CLN6-208	ENST00000567060	RHOB	P62745	196 aa		12.48	□□□□□ -0.41
CLN6-208	ENST00000567060	FAM78B	Q5VT40	261 aa		12.48	□□□□□ -0.41
CLN6-208	ENST00000567060	CYTL1	Q9NRR1	136 aa		12.48	□□□□□ -0.41
CLN6-208	ENST00000567060	TMEM14C	Q9P0S9	112 aa		12.48	□□□□□ -0.41
CLN6-208	ENST00000567060	SMAD5-AS1	Q9Y6J3	95 aa		12.48	□□□□□ -0.41
CLN6-208	ENST00000567060	ATF4	P18848	351 aa	Predicted RBP	12.47	□□□□□ -0.41
CLN6-208	ENST00000567060	ID1	P41134	155 aa		12.47	□□□□□ -0.41
CLN6-208	ENST00000567060	TAS2R45	P59539	299 aa		12.47	□□□□□ -0.41
CLN6-208	ENST00000567060	SNRPD3	P62318	126 aa	Known RBP	12.47	□□□□□ -0.41
CLN6-208	ENST00000567060	GUK1	Q16774	197 aa		12.47	□□□□□ -0.41
CLN6-208	ENST00000567060	TMUB2	Q71RG4	321 aa		12.47	□□□□□ -0.41
CLN6-208	ENST00000567060		Q8N1Y9	231 aa		12.47	□□□□□ -0.41
CLN6-208	ENST00000567060	CLEC5A	Q9NY25	188 aa		12.47	□□□□□ -0.41
CLN6-208	ENST00000567060	FUT9	Q9Y231	359 aa		12.47	□□□□□ -0.41
CLN6-208	ENST00000567060	OR11H12	B2RN74	326 aa		12.46	□□□□□ -0.41
CLN6-208	ENST00000567060	ISLR	O14498	428 aa		12.46	□□□□□ -0.41
CLN6-208	ENST00000567060	PSMB3	P49720	205 aa		12.46	□□□□□ -0.41
CLN6-208	ENST00000567060	STOML3	Q8TAV4	291 aa		12.46	□□□□□ -0.41
CLN6-208	ENST00000567060	IGKV3-7	A0A075B6H7	116 aa		12.45	□□□□□ -0.42
CLN6-208	ENST00000567060	MRPS12	O15235	138 aa	Known RBP	12.45	□□□□□ -0.42
CLN6-208	ENST00000567060	ZNF253	O75346	499 aa		12.45	□□□□□ -0.42
CLN6-208	ENST00000567060	CD7	P09564	240 aa		12.45	□□□□□ -0.42
CLN6-208	ENST00000567060	SEC11B	P0C7V7	166 aa		12.45	□□□□□ -0.42
CLN6-208	ENST00000567060	SPP1	P10451	314 aa		12.45	□□□□□ -0.42
CLN6-208	ENST00000567060	TPT1	P13693	172 aa	Known RBP	12.45	□□□□□ -0.42
CLN6-208	ENST00000567060	LGALSL	Q3ZCW2	172 aa	Predicted RBP	12.45	□□□□□ -0.42
CLN6-208	ENST00000567060	LEMD1	Q68G75	181 aa		12.45	□□□□□ -0.42
CLN6-208	ENST00000567060	EIF5AL1	Q6IS14	154 aa	Known RBP	12.45	□□□□□ -0.42
CLN6-208	ENST00000567060	LCN15	Q6UWW0	184 aa		12.45	□□□□□ -0.42
CLN6-208	ENST00000567060	GBGT1	Q8N5D6	347 aa		12.45	□□□□□ -0.42
CLN6-208	ENST00000567060	SLC50A1	Q9BRV3	221 aa		12.45	□□□□□ -0.42
CLN6-208	ENST00000567060	ZNF471	Q9BX82	626 aa	Predicted RBP	12.45	□□□□□ -0.42
CLN6-208	ENST00000567060	HRH4	Q9H3N8	390 aa		12.45	□□□□□ -0.42
CLN6-208	ENST00000567060	C19orf73	Q9NVV2	129 aa		12.45	□□□□□ -0.42
CLN6-208	ENST00000567060		A0A1W2PPV4	95 aa		12.44	□□□□□ -0.42
CLN6-208	ENST00000567060	NHLRC4	P0CG21	123 aa	Predicted RBP	12.44	□□□□□ -0.42
CLN6-208	ENST00000567060	PDE6H	Q13956	83 aa		12.44	□□□□□ -0.42
CLN6-208	ENST00000567060	ODF3L2	Q3SX64	289 aa		12.44	□□□□□ -0.42
CLN6-208	ENST00000567060	KHDC3L	Q587J8	217 aa		12.44	□□□□□ -0.42
CLN6-208	ENST00000567060	GCSAML	Q5JQS6	135 aa		12.44	□□□□□ -0.42
CLN6-208	ENST00000567060	OR10G4	Q8NGN3	311 aa		12.44	□□□□□ -0.42
CLN6-208	ENST00000567060	OR10G9	Q8NGN4	311 aa		12.44	□□□□□ -0.42
CLN6-208	ENST00000567060	OR10G7	Q8NGN6	311 aa		12.44	□□□□□ -0.42
CLN6-208	ENST00000567060	SELENOK	Q9Y6D0	94 aa		12.44	□□□□□ -0.42
CLN6-208	ENST00000567060		U3KQK5	164 aa		12.44	□□□□□ -0.42
CLN6-208	ENST00000567060	UMAD1	C9J7I0	102 aa		12.43	□□□□□ -0.42
CLN6-208	ENST00000567060	SOCS3	O14543	225 aa		12.43	□□□□□ -0.42
CLN6-208	ENST00000567060	IGLC2	P0DOY2	106 aa		12.43	□□□□□ -0.42
CLN6-208	ENST00000567060	HIST1H1E	P10412	219 aa	Known RBP	12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms