RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 TRAV8-1A0A0A6YYK1 113 aa12.49□□□□□ -0.41
COMMD4-215ENST00000566843 CCL3L1P16619 93 aa12.49□□□□□ -0.41
COMMD4-215ENST00000566843 FA2HQ7L5A8 372 aa12.49□□□□□ -0.41
COMMD4-215ENST00000566843 FER1L6-AS1Q8NA97 138 aa12.49□□□□□ -0.41
COMMD4-215ENST00000566843 NAV3Q8IVL0 2385 aa12.49□□□□□ -0.41
COMMD4-215ENST00000566843 LOC400499M0QZD8 3231 aa12.49□□□□□ -0.41
COMMD4-215ENST00000566843 CFAP47Q6ZTR5 3102 aa12.48□□□□□ -0.41
COMMD4-215ENST00000566843 MBD3L4A6NDZ8 208 aaPredicted RBP12.48□□□□□ -0.41
COMMD4-215ENST00000566843 MBD3L3A6NE82 208 aaPredicted RBP12.48□□□□□ -0.41
COMMD4-215ENST00000566843 MBD3L5A6NJ08 208 aaPredicted RBP12.48□□□□□ -0.41
COMMD4-215ENST00000566843 ARMS2P0C7Q2 107 aa12.48□□□□□ -0.41
COMMD4-215ENST00000566843 IGFL2Q6UWQ7 119 aa12.48□□□□□ -0.41
COMMD4-215ENST00000566843 GTF2H5Q6ZYL4 71 aa12.48□□□□□ -0.41
COMMD4-215ENST00000566843 PRNTQ86SH4 94 aa12.48□□□□□ -0.41
COMMD4-215ENST00000566843 PIP4P2Q8N4L2 257 aa12.48□□□□□ -0.41
COMMD4-215ENST00000566843 MBD3L2Q8NHZ7 208 aaPredicted RBP12.48□□□□□ -0.41
COMMD4-215ENST00000566843 MEGF9Q9H1U4 602 aa12.48□□□□□ -0.41
COMMD4-215ENST00000566843 TPSG1Q9NRR2 321 aa12.48□□□□□ -0.41
COMMD4-215ENST00000566843 HIGD1AQ9Y241 93 aa12.48□□□□□ -0.41
COMMD4-215ENST00000566843 URB1O60287 2271 aaKnown RBP12.48□□□□□ -0.41
COMMD4-215ENST00000566843 PPIAL4DF5H284 164 aa12.48□□□□□ -0.41
COMMD4-215ENST00000566843 SLC25A17O43808 307 aa12.48□□□□□ -0.41
COMMD4-215ENST00000566843 FOXC1Q12948 553 aa12.48□□□□□ -0.41
COMMD4-215ENST00000566843 C1orf185Q5T7R7 199 aa12.48□□□□□ -0.41
COMMD4-215ENST00000566843 TMEM200BQ69YZ2 307 aa12.48□□□□□ -0.41
COMMD4-215ENST00000566843 BOD1L2Q8IYS8 172 aa12.48□□□□□ -0.41
COMMD4-215ENST00000566843 RPRMLQ8N4K4 120 aa12.48□□□□□ -0.41
COMMD4-215ENST00000566843 LAMA5O15230 3695 aa12.47□□□□□ -0.41
COMMD4-215ENST00000566843 A0A096LNJ9 63 aa12.47□□□□□ -0.41
COMMD4-215ENST00000566843 NKX2-8O15522 239 aa12.47□□□□□ -0.41
COMMD4-215ENST00000566843 WT1P19544 449 aaPredicted RBP12.47□□□□□ -0.41
COMMD4-215ENST00000566843 LGALS9BQ3B8N2 356 aa12.47□□□□□ -0.41
COMMD4-215ENST00000566843 LGALS9CQ6DKI2 356 aa12.47□□□□□ -0.41
COMMD4-215ENST00000566843 HCP5Q6MZN7 132 aa12.47□□□□□ -0.41
COMMD4-215ENST00000566843 ZNF474Q6S9Z5 364 aaPredicted RBP12.47□□□□□ -0.41
COMMD4-215ENST00000566843 GOLT1AQ6ZVE7 132 aa12.47□□□□□ -0.41
COMMD4-215ENST00000566843 Q71RC1 249 aaPredicted RBP12.47□□□□□ -0.41
COMMD4-215ENST00000566843 TNFRSF14Q92956 283 aa12.47□□□□□ -0.41
COMMD4-215ENST00000566843 AKAP13Q12802 2813 aa12.47□□□□□ -0.41
COMMD4-215ENST00000566843 A6NDN8 102 aa12.46□□□□□ -0.41
COMMD4-215ENST00000566843 SNAI2O43623 268 aa12.46□□□□□ -0.41
COMMD4-215ENST00000566843 FCN3O75636 299 aa12.46□□□□□ -0.41
COMMD4-215ENST00000566843 APOBEC3AP31941 199 aaPredicted RBP12.46□□□□□ -0.41
COMMD4-215ENST00000566843 LGALS7P47929 136 aa12.46□□□□□ -0.41
COMMD4-215ENST00000566843 IGF2-ASQ6U949 168 aa12.46□□□□□ -0.41
COMMD4-215ENST00000566843 ZNF493Q6ZR52 646 aa12.46□□□□□ -0.41
COMMD4-215ENST00000566843 PRSS3P2Q8NHM4 247 aa12.46□□□□□ -0.41
COMMD4-215ENST00000566843 SRSF12Q8WXF0 261 aaKnown RBP12.46□□□□□ -0.41
COMMD4-215ENST00000566843 ZC2HC1AQ96GY0 325 aa12.46□□□□□ -0.41
COMMD4-215ENST00000566843 RITA1Q96K30 269 aa12.46□□□□□ -0.41
COMMD4-215ENST00000566843 JMJD8Q96S16 334 aa12.46□□□□□ -0.41
COMMD4-215ENST00000566843 RABAC1Q9UI14 185 aa12.46□□□□□ -0.41
COMMD4-215ENST00000566843 TRAV17A0A0B4J275 112 aa12.46□□□□□ -0.42
COMMD4-215ENST00000566843 K7EP34 96 aa12.46□□□□□ -0.42
COMMD4-215ENST00000566843 SIVA1O15304 175 aa12.46□□□□□ -0.42
COMMD4-215ENST00000566843 SAP30O75446 220 aa12.46□□□□□ -0.42
COMMD4-215ENST00000566843 MC5RP33032 325 aa12.46□□□□□ -0.42
COMMD4-215ENST00000566843 TMEM75Q8N9X5 138 aa12.46□□□□□ -0.42
COMMD4-215ENST00000566843 FDCSPQ8NFU4 85 aa12.46□□□□□ -0.42
COMMD4-215ENST00000566843 U3KQK5 164 aa12.46□□□□□ -0.42
COMMD4-215ENST00000566843 CADP27708 2225 aa12.46□□□□□ -0.42
COMMD4-215ENST00000566843 CCL11P51671 97 aa12.45□□□□□ -0.42
COMMD4-215ENST00000566843 Q6AWC8 147 aa12.45□□□□□ -0.42
COMMD4-215ENST00000566843 ZADH2Q8N4Q0 377 aa12.45□□□□□ -0.42
COMMD4-215ENST00000566843 TIMM8BQ9Y5J9 83 aaPredicted RBP12.45□□□□□ -0.42
COMMD4-215ENST00000566843 G3V4G9 280 aa12.45□□□□□ -0.42
COMMD4-215ENST00000566843 HSD52Q0P140 79 aa12.45□□□□□ -0.42
COMMD4-215ENST00000566843 EXOC3-AS1Q8N2X6 119 aa12.45□□□□□ -0.42
COMMD4-215ENST00000566843 OR9G4Q8NGQ1 327 aa12.45□□□□□ -0.42
COMMD4-215ENST00000566843 SLC25A39Q9BZJ4 359 aaPredicted RBP12.45□□□□□ -0.42
COMMD4-215ENST00000566843 CRYGBP07316 175 aa12.44□□□□□ -0.42
COMMD4-215ENST00000566843 CEACAM3P40198 252 aa12.44□□□□□ -0.42
COMMD4-215ENST00000566843 RPL27AP46776 148 aaKnown RBP12.44□□□□□ -0.42
COMMD4-215ENST00000566843 ARFGEF3Q5TH69 2177 aa12.44□□□□□ -0.42
COMMD4-215ENST00000566843 SMAD7O15105 426 aaKnown RBP12.44□□□□□ -0.42
COMMD4-215ENST00000566843 FAM106CPP0CH98 169 aa12.44□□□□□ -0.42
COMMD4-215ENST00000566843 S100A7P31151 101 aa12.44□□□□□ -0.42
COMMD4-215ENST00000566843 UQCRFS1P47985 274 aa12.44□□□□□ -0.42
COMMD4-215ENST00000566843 FAM106AQ4KMX7 169 aa12.44□□□□□ -0.42
COMMD4-215ENST00000566843 AP1S3Q96PC3 154 aa12.44□□□□□ -0.42
COMMD4-215ENST00000566843 TNFRSF1AP19438 455 aa12.43□□□□□ -0.42
COMMD4-215ENST00000566843 IFI27P40305 119 aaPredicted RBP12.43□□□□□ -0.42
COMMD4-215ENST00000566843 ADAMTSL5Q6ZMM2 481 aa12.43□□□□□ -0.42
COMMD4-215ENST00000566843 NEGR1Q7Z3B1 354 aa12.43□□□□□ -0.42
COMMD4-215ENST00000566843 OR4X2Q8NGF9 303 aa12.43□□□□□ -0.42
COMMD4-215ENST00000566843 SCNM1Q9BWG6 230 aa12.43□□□□□ -0.42
COMMD4-215ENST00000566843 KLK10O43240 276 aa12.42□□□□□ -0.42
COMMD4-215ENST00000566843 LYZP61626 148 aa12.42□□□□□ -0.42
COMMD4-215ENST00000566843 LOXL1Q08397 574 aaPredicted RBP12.42□□□□□ -0.42
COMMD4-215ENST00000566843 KIR3DS1Q14943 382 aa12.42□□□□□ -0.42
COMMD4-215ENST00000566843 SIGLEC8Q9NYZ4 499 aa12.42□□□□□ -0.42
COMMD4-215ENST00000566843 F11RQ9Y624 299 aaKnown RBP12.42□□□□□ -0.42
COMMD4-215ENST00000566843 NBEAQ8NFP9 2946 aa12.42□□□□□ -0.42
COMMD4-215ENST00000566843 IGHV3-21A0A0B4J1V1 117 aa12.42□□□□□ -0.42
COMMD4-215ENST00000566843 A1L4Q6 167 aa12.42□□□□□ -0.42
COMMD4-215ENST00000566843 A6NJY4 79 aa12.42□□□□□ -0.42
COMMD4-215ENST00000566843 CRIP1P50238 77 aa12.42□□□□□ -0.42
COMMD4-215ENST00000566843 DLX6P56179 175 aa12.42□□□□□ -0.42
COMMD4-215ENST00000566843 OR8A1Q8NGG7 326 aa12.42□□□□□ -0.42
COMMD4-215ENST00000566843 PSG8Q9UQ74 426 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms