RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 ZFP69Q49AA0 526 aa9.1□□□□□ -0.95
RNF40-208ENST00000565995 Q5BKY6 102 aa9.1□□□□□ -0.95
RNF40-208ENST00000565995 ACTL10Q5JWF8 245 aa9.1□□□□□ -0.95
RNF40-208ENST00000565995 C1orf134Q5TEV5 83 aa9.1□□□□□ -0.95
RNF40-208ENST00000565995 ZNF705AQ6ZN79 300 aaPredicted RBP9.1□□□□□ -0.95
RNF40-208ENST00000565995 STX12Q86Y82 276 aa9.1□□□□□ -0.95
RNF40-208ENST00000565995 STXBP6Q8NFX7 210 aa9.1□□□□□ -0.95
RNF40-208ENST00000565995 SMIM8Q96KF7 97 aa9.1□□□□□ -0.95
RNF40-208ENST00000565995 SMIM9A6NGZ8 99 aa9.09□□□□□ -0.95
RNF40-208ENST00000565995 ZNF705FA8MVS1 300 aaPredicted RBP9.09□□□□□ -0.95
RNF40-208ENST00000565995 H0YIZ8 118 aa9.09□□□□□ -0.95
RNF40-208ENST00000565995 ARPC5O15511 151 aa9.09□□□□□ -0.95
RNF40-208ENST00000565995 ZNF705DP0CH99 300 aaPredicted RBP9.09□□□□□ -0.95
RNF40-208ENST00000565995 ZNF705BP0CI00 300 aaPredicted RBP9.09□□□□□ -0.95
RNF40-208ENST00000565995 TAS2R30P59541 319 aa9.09□□□□□ -0.95
RNF40-208ENST00000565995 NUTF2P61970 127 aaKnown RBP9.09□□□□□ -0.95
RNF40-208ENST00000565995 RAB11AP62491 216 aa9.09□□□□□ -0.95
RNF40-208ENST00000565995 NOXA1Q86UR1 476 aa9.09□□□□□ -0.95
RNF40-208ENST00000565995 INO80EQ8NBZ0 244 aaPredicted RBP9.09□□□□□ -0.95
RNF40-208ENST00000565995 METTL26Q96S19 204 aa9.09□□□□□ -0.95
RNF40-208ENST00000565995 LYRM2Q9NU23 88 aaPredicted RBP9.09□□□□□ -0.95
RNF40-208ENST00000565995 U3KQ87 197 aa9.09□□□□□ -0.95
RNF40-208ENST00000565995 TMEM189A5PLL7 270 aa9.08□□□□□ -0.96
RNF40-208ENST00000565995 FAM24AA6NFZ4 105 aa9.08□□□□□ -0.96
RNF40-208ENST00000565995 CORTO00230 105 aa9.08□□□□□ -0.96
RNF40-208ENST00000565995 CLN5O75503 358 aa9.08□□□□□ -0.96
RNF40-208ENST00000565995 METTL15P1P0C7V9 234 aa9.08□□□□□ -0.96
RNF40-208ENST00000565995 SPART-AS1P0CW21 52 aa9.08□□□□□ -0.96
RNF40-208ENST00000565995 SLC25A4P12235 298 aa9.08□□□□□ -0.96
RNF40-208ENST00000565995 AP2S1P53680 142 aaPredicted RBP9.08□□□□□ -0.96
RNF40-208ENST00000565995 OR8G2PQ6IF36 304 aa9.08□□□□□ -0.96
RNF40-208ENST00000565995 ZNF546Q86UE3 836 aa9.08□□□□□ -0.96
RNF40-208ENST00000565995 OR4X1Q8NH49 305 aa9.08□□□□□ -0.96
RNF40-208ENST00000565995 SLC25A31Q9H0C2 315 aa9.08□□□□□ -0.96
RNF40-208ENST00000565995 IGLV2-18A0A075B6J9 118 aa9.07□□□□□ -0.96
RNF40-208ENST00000565995 IGSF23A1L1A6 192 aa9.07□□□□□ -0.96
RNF40-208ENST00000565995 HELTA6NFD8 242 aa9.07□□□□□ -0.96
RNF40-208ENST00000565995 G3V3Q6 166 aa9.07□□□□□ -0.96
RNF40-208ENST00000565995 H3BMM0 161 aa9.07□□□□□ -0.96
RNF40-208ENST00000565995 CST7O76096 145 aa9.07□□□□□ -0.96
RNF40-208ENST00000565995 C1QBP02746 253 aa9.07□□□□□ -0.96
RNF40-208ENST00000565995 RNASE2P10153 161 aaKnown RBP9.07□□□□□ -0.96
RNF40-208ENST00000565995 RPL12P30050 165 aaKnown RBP9.07□□□□□ -0.96
RNF40-208ENST00000565995 OPRK1P41145 380 aa9.07□□□□□ -0.96
RNF40-208ENST00000565995 EIF2B2P49770 351 aaKnown RBP9.07□□□□□ -0.96
RNF40-208ENST00000565995 PAX9P55771 341 aa9.07□□□□□ -0.96
RNF40-208ENST00000565995 FAM3BP58499 235 aaPredicted RBP9.07□□□□□ -0.96
RNF40-208ENST00000565995 C16orf54Q6UWD8 224 aa9.07□□□□□ -0.96
RNF40-208ENST00000565995 UBE2DNLQ8IWF7 75 aa9.07□□□□□ -0.96
RNF40-208ENST00000565995 GLMPQ8WWB7 406 aa9.07□□□□□ -0.96
RNF40-208ENST00000565995 MRPL36Q9P0J6 103 aaKnown RBP9.07□□□□□ -0.96
RNF40-208ENST00000565995 XCL2Q9UBD3 114 aa9.07□□□□□ -0.96
RNF40-208ENST00000565995 HERC1Q15751 4861 aa9.06□□□□□ -0.96
RNF40-208ENST00000565995 TRAV30A0A087WSZ9 112 aa9.06□□□□□ -0.96
RNF40-208ENST00000565995 IGKV1-17P01599 117 aa9.06□□□□□ -0.96
RNF40-208ENST00000565995 HNRNPCP07910 306 aaKnown RBP eCLIP9.06□□□□□ -0.96
RNF40-208ENST00000565995 SULT1A1P50225 295 aa9.06□□□□□ -0.96
RNF40-208ENST00000565995 ATP5IP56385 69 aaPredicted RBP9.06□□□□□ -0.96
RNF40-208ENST00000565995 HBG1P69891 147 aa9.06□□□□□ -0.96
RNF40-208ENST00000565995 HBG2P69892 147 aa9.06□□□□□ -0.96
RNF40-208ENST00000565995 BSXQ3C1V8 233 aa9.06□□□□□ -0.96
RNF40-208ENST00000565995 C2orf83Q53S99 150 aa9.06□□□□□ -0.96
RNF40-208ENST00000565995 PSMG4Q5JS54 123 aa9.06□□□□□ -0.96
RNF40-208ENST00000565995 Q8N1X5 172 aa9.06□□□□□ -0.96
RNF40-208ENST00000565995 TMEM252Q8N6L7 170 aa9.06□□□□□ -0.96
RNF40-208ENST00000565995 MAPKAPK5-AS1Q8N8E1 139 aa9.06□□□□□ -0.96
RNF40-208ENST00000565995 NARS2Q96I59 477 aaKnown RBP9.06□□□□□ -0.96
RNF40-208ENST00000565995 HYLS1Q96M11 299 aa9.06□□□□□ -0.96
RNF40-208ENST00000565995 CLUHP3Q96NS8 147 aa9.06□□□□□ -0.96
RNF40-208ENST00000565995 C11orf1Q9H5F2 150 aa9.06□□□□□ -0.96
RNF40-208ENST00000565995 FNDC4Q9H6D8 234 aaPredicted RBP9.06□□□□□ -0.96
RNF40-208ENST00000565995 DKK2Q9UBU2 259 aa9.06□□□□□ -0.96
RNF40-208ENST00000565995 TNFSF18Q9UNG2 199 aa9.06□□□□□ -0.96
RNF40-208ENST00000565995 TEX48A0A1B0GUV7 120 aa9.05□□□□□ -0.96
RNF40-208ENST00000565995 SMCO3A2RU48 225 aa9.05□□□□□ -0.96
RNF40-208ENST00000565995 BOLA2-SMG1P6H3BVE0 249 aa9.05□□□□□ -0.96
RNF40-208ENST00000565995 HLA-DRB4P13762 266 aa9.05□□□□□ -0.96
RNF40-208ENST00000565995 BAXQ07812 192 aa9.05□□□□□ -0.96
RNF40-208ENST00000565995 TMEM14EPQ6UXP3 125 aa9.05□□□□□ -0.96
RNF40-208ENST00000565995 OR11H4Q8NGC9 324 aa9.05□□□□□ -0.96
RNF40-208ENST00000565995 OR10P1Q8NGE3 313 aa9.05□□□□□ -0.96
RNF40-208ENST00000565995 RNASEH2CQ8TDP1 164 aaKnown RBP9.05□□□□□ -0.96
RNF40-208ENST00000565995 TMEM170AQ8WVE7 144 aa9.05□□□□□ -0.96
RNF40-208ENST00000565995 SMIM3Q9BZL3 60 aa9.05□□□□□ -0.96
RNF40-208ENST00000565995 HLA-DRB4X5D2U9 266 aa9.05□□□□□ -0.96
RNF40-208ENST00000565995 RPS10-NUDT3A0A1W2PQS6 291 aa9.04□□□□□ -0.96
RNF40-208ENST00000565995 C16orf90A8MZG2 172 aa9.04□□□□□ -0.96
RNF40-208ENST00000565995 SCGB2A1O75556 95 aa9.04□□□□□ -0.96
RNF40-208ENST00000565995 NKX2-5P52952 324 aaPredicted RBP9.04□□□□□ -0.96
RNF40-208ENST00000565995 SNRPD3P62318 126 aaKnown RBP9.04□□□□□ -0.96
RNF40-208ENST00000565995 AKR1C1Q04828 323 aa9.04□□□□□ -0.96
RNF40-208ENST00000565995 SLC38A11Q08AI6 406 aa9.04□□□□□ -0.96
RNF40-208ENST00000565995 CLINT1Q14677 625 aa9.04□□□□□ -0.96
RNF40-208ENST00000565995 MLANAQ16655 118 aa9.04□□□□□ -0.96
RNF40-208ENST00000565995 ETFRF1Q6IPR1 90 aa9.04□□□□□ -0.96
RNF40-208ENST00000565995 ACOT7LQ6ZUV0 252 aa9.04□□□□□ -0.96
RNF40-208ENST00000565995 OR1S2Q8NGQ3 325 aa9.04□□□□□ -0.96
RNF40-208ENST00000565995 SLC35E1Q96K37 410 aa9.04□□□□□ -0.96
RNF40-208ENST00000565995 AQP10Q96PS8 301 aa9.04□□□□□ -0.96
RNF40-208ENST00000565995 NIPSNAP3BQ9BS92 247 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms