RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 CECR9P0C854 216 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 SLC25A4P12235 298 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 RPS4Y1P22090 263 aaKnown RBP2.38□□□□□ -2.03
CHD9-216ENST00000565803 BTG2P78543 158 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 ZNF141Q15928 474 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 KHDC3LQ587J8 217 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 KLF17Q5JT82 389 aaPredicted RBP2.38□□□□□ -2.03
CHD9-216ENST00000565803 C1orf140Q5VVS0 124 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 MARCH3Q86UD3 253 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 C1orf158Q8N1D5 194 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 OSTCQ9NRP0 149 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 UQCR10Q9UDW1 63 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 ZNF443Q9Y2A4 671 aaPredicted RBP2.38□□□□□ -2.03
CHD9-216ENST00000565803 A0A087WXM4 84 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 TRAV4A0A0B4J268 109 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 LOC107984156A0A0G2JMH3 177 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 TLCD2A6NGC4 264 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 RPL37AP8A6NKH3 93 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 TMEM262E9PQX1 116 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 TRBV12-3P01733 135 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 H2AFZP0C0S5 128 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 BSPH1Q075Z2 132 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 ZNF146Q15072 292 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 AAED1Q7RTV5 226 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 ARL17AQ8IVW1 177 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 TTC9CQ8N5M4 171 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 METTL27Q8N6F8 245 aaPredicted RBP2.37□□□□□ -2.03
CHD9-216ENST00000565803 NUP37Q8NFH4 326 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 OR8A1Q8NGG7 326 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 OR5H2Q8NGV7 314 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 CHCHD10Q8WYQ3 142 aaPredicted RBP2.37□□□□□ -2.03
CHD9-216ENST00000565803 TAF15Q92804 592 aaKnown RBP eCLIP2.37□□□□□ -2.03
CHD9-216ENST00000565803 TEX37Q96LM6 180 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 OR2A5Q96R48 311 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 RPS10P5Q9NQ39 176 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 CSAG2Q9Y5P2 127 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 CACNA1EQ15878 2313 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 NDUFB3O43676 98 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 ZNF73O43830 326 aaPredicted RBP2.37□□□□□ -2.03
CHD9-216ENST00000565803 HRASP01112 189 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 CRYBA2P53672 197 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 GNG11P61952 73 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 SNRPD3P62318 126 aaKnown RBP2.37□□□□□ -2.03
CHD9-216ENST00000565803 LY6G5CQ5SRR4 150 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 OR2T2Q6IF00 324 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 KTN1-AS1Q86SY8 53 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 OR5D16Q8NGK9 328 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 S100A16Q96FQ6 103 aaKnown RBP2.37□□□□□ -2.03
CHD9-216ENST00000565803 C2orf50Q96LR7 162 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 KRTAP9-8Q9BYQ0 159 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 IL25Q9H293 177 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 XCL2Q9UBD3 114 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 ABCA7Q8IZY2 2146 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 AHCTF1Q8WYP5 2266 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 A0A087WWV3 80 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 HLA-DPB1P04440 258 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 FRMD6-AS1P0C7T7 363 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 CIRBPQ14011 172 aaKnown RBP2.37□□□□□ -2.03
CHD9-216ENST00000565803 FAM182AQ5T1J6 154 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 TMEM14EPQ6UXP3 125 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 OR51H1Q8NH63 302 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 CCL13Q99616 98 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 NAA60Q9H7X0 242 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 SHANK1Q9Y566 2161 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 F5P12259 2224 aa2.37□□□□□ -2.03
CHD9-216ENST00000565803 DYNC2H1Q8NCM8 4307 aaKnown RBP2.36□□□□□ -2.03
CHD9-216ENST00000565803 IGHV3OR16-12A0A075B7B8 117 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 ZNF503-AS2A6NEH8 195 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 A8MXK9 166 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 IGLL5B9A064 214 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 LST1O00453 97 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 IGHV1-2P23083 117 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 CFPP27918 469 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 CXCL5P42830 114 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 TMEM258P61165 79 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 LSM3P62310 102 aaKnown RBP2.36□□□□□ -2.03
CHD9-216ENST00000565803 UBE2BP63146 152 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 Q56UQ5 140 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 VN1R4Q7Z5H5 301 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 HMGN2P46Q86SG4 172 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 KRTAP19-1Q8IUB9 90 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 ZIC4Q8N9L1 334 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 H1FXQ92522 213 aaKnown RBP2.36□□□□□ -2.03
CHD9-216ENST00000565803 PMCHL2Q9BQD1 86 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 HDHD3Q9BSH5 251 aaPredicted RBP2.36□□□□□ -2.03
CHD9-216ENST00000565803 PARP12Q9H0J9 701 aaKnown RBP2.36□□□□□ -2.03
CHD9-216ENST00000565803 PROCRQ9UNN8 238 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 PCNX1Q96RV3 2341 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 LRP4O75096 1905 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 IGHV4-4A0A075B6R2 117 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.36□□□□□ -2.03
CHD9-216ENST00000565803 IGHV6-1A0A0B4J1U7 121 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 TCRBV3S1A0A5B6 114 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 A6NED7 52 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 ARRDC5A6NEK1 342 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 A8MUN3 132 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 FAM220BPB1ANY3 271 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 H0YJW9 148 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 HLA-DQA1P01909 254 aa2.36□□□□□ -2.03
CHD9-216ENST00000565803 CD28P10747 220 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms