RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 H3BRN7 92 aa15.79■□□□□ 0.12
MSLN-205ENST00000563941 HES1Q14469 280 aa15.79■□□□□ 0.12
MSLN-205ENST00000563941 IGLV2-11P01706 119 aa15.79■□□□□ 0.12
MSLN-205ENST00000563941 C3orf79P0CE67 100 aa15.79■□□□□ 0.12
MSLN-205ENST00000563941 PRTN3P24158 256 aa15.79■□□□□ 0.12
MSLN-205ENST00000563941 CIARTQ8N365 385 aaPredicted RBP15.79■□□□□ 0.12
MSLN-205ENST00000563941 OR4B1Q8NGF8 309 aa15.79■□□□□ 0.12
MSLN-205ENST00000563941 TRBV19A0A075B6N1 114 aa15.78■□□□□ 0.12
MSLN-205ENST00000563941 HOXB4P17483 251 aaPredicted RBP15.78■□□□□ 0.12
MSLN-205ENST00000563941 KLF17Q5JT82 389 aaPredicted RBP15.78■□□□□ 0.12
MSLN-205ENST00000563941 PRNTQ86SH4 94 aa15.78■□□□□ 0.12
MSLN-205ENST00000563941 BPIFA4PQ86YQ2 179 aa15.78■□□□□ 0.12
MSLN-205ENST00000563941 ZNF491Q8N8L2 437 aa15.78■□□□□ 0.12
MSLN-205ENST00000563941 NEU4Q8WWR8 484 aaPredicted RBP15.78■□□□□ 0.12
MSLN-205ENST00000563941 PGLYRP4Q96LB8 373 aa15.78■□□□□ 0.12
MSLN-205ENST00000563941 GFRA4Q9GZZ7 299 aa15.78■□□□□ 0.12
MSLN-205ENST00000563941 SOX21Q9Y651 276 aaPredicted RBP15.78■□□□□ 0.12
MSLN-205ENST00000563941 TACC2O95359 2948 aa15.78■□□□□ 0.12
MSLN-205ENST00000563941 NUTF2P61970 127 aaKnown RBP15.77■□□□□ 0.12
MSLN-205ENST00000563941 C5orf64Q2M2E5 130 aa15.77■□□□□ 0.12
MSLN-205ENST00000563941 PRR31Q5SQ13 230 aa15.77■□□□□ 0.12
MSLN-205ENST00000563941 OR4F17Q8NGA8 305 aa15.77■□□□□ 0.12
MSLN-205ENST00000563941 BORCS7Q96B45 105 aa15.77■□□□□ 0.12
MSLN-205ENST00000563941 RNF125Q96EQ8 232 aa15.77■□□□□ 0.12
MSLN-205ENST00000563941 C17orf77Q96MU5 243 aa15.77■□□□□ 0.12
MSLN-205ENST00000563941 NPIPB6E9PJ23 425 aa15.77■□□□□ 0.11
MSLN-205ENST00000563941 HSBP1O75506 76 aa15.77■□□□□ 0.11
MSLN-205ENST00000563941 IL4P05112 153 aa15.77■□□□□ 0.11
MSLN-205ENST00000563941 RBPMS2Q6ZRY4 209 aaKnown RBP15.77■□□□□ 0.11
MSLN-205ENST00000563941 S4R3C0 116 aa15.77■□□□□ 0.11
MSLN-205ENST00000563941 IGLC2P0DOY2 106 aa15.76■□□□□ 0.11
MSLN-205ENST00000563941 COL8A1P27658 744 aa15.76■□□□□ 0.11
MSLN-205ENST00000563941 Q71RC1 249 aaPredicted RBP15.76■□□□□ 0.11
MSLN-205ENST00000563941 HLA-DRB1P01911 266 aa15.76■□□□□ 0.11
MSLN-205ENST00000563941 RNF24Q9Y225 148 aa15.76■□□□□ 0.11
MSLN-205ENST00000563941 TRBV6-1A0A0K0K1D8 114 aa15.75■□□□□ 0.11
MSLN-205ENST00000563941 RNASEKQ6P5S7 137 aaKnown RBP15.75■□□□□ 0.11
MSLN-205ENST00000563941 WI2-2373I1.2A0A1W2PRP0 233 aa15.74■□□□□ 0.11
MSLN-205ENST00000563941 GNG7O60262 68 aa15.74■□□□□ 0.11
MSLN-205ENST00000563941 SIGLEC15Q6ZMC9 328 aa15.74■□□□□ 0.11
MSLN-205ENST00000563941 TMEM190Q8WZ59 177 aa15.74■□□□□ 0.11
MSLN-205ENST00000563941 RELNP78509 3460 aa15.74■□□□□ 0.11
MSLN-205ENST00000563941 IGLV11-55A0A075B6I3 123 aa15.74■□□□□ 0.11
MSLN-205ENST00000563941 FAM231BA6NCW3 169 aa15.74■□□□□ 0.11
MSLN-205ENST00000563941 CTRLP40313 264 aa15.74■□□□□ 0.11
MSLN-205ENST00000563941 MRPL52Q86TS9 123 aaKnown RBP15.74■□□□□ 0.11
MSLN-205ENST00000563941 TMEM75Q8N9X5 138 aa15.74■□□□□ 0.11
MSLN-205ENST00000563941 ARPC1AQ92747 370 aa15.74■□□□□ 0.11
MSLN-205ENST00000563941 FANCD2OSQ96PS1 177 aa15.74■□□□□ 0.11
MSLN-205ENST00000563941 NPIPB5A8MRT5 1133 aa15.73■□□□□ 0.11
MSLN-205ENST00000563941 M0R2Z0 102 aa15.73■□□□□ 0.11
MSLN-205ENST00000563941 MRPS12O15235 138 aaKnown RBP15.73■□□□□ 0.11
MSLN-205ENST00000563941 FCGR2BP31994 310 aaPredicted RBP15.73■□□□□ 0.11
MSLN-205ENST00000563941 SPATA45Q537H7 98 aa15.73■□□□□ 0.11
MSLN-205ENST00000563941 VMO1Q7Z5L0 202 aa15.73■□□□□ 0.11
MSLN-205ENST00000563941 DYNAPQ8N1N2 210 aa15.73■□□□□ 0.11
MSLN-205ENST00000563941 TRAV30A0A087WSZ9 112 aa15.73■□□□□ 0.11
MSLN-205ENST00000563941 NDPQ00604 133 aa15.73■□□□□ 0.11
MSLN-205ENST00000563941 C16orf54Q6UWD8 224 aa15.73■□□□□ 0.11
MSLN-205ENST00000563941 ZNF562Q6V9R5 426 aa15.73■□□□□ 0.11
MSLN-205ENST00000563941 LYPD1Q8N2G4 141 aa15.73■□□□□ 0.11
MSLN-205ENST00000563941 FAM181BA6NEQ2 426 aa15.72■□□□□ 0.11
MSLN-205ENST00000563941 NCBP2LA6PVI3 153 aaKnown RBP15.72■□□□□ 0.11
MSLN-205ENST00000563941 MFAP4P55083 255 aa15.72■□□□□ 0.11
MSLN-205ENST00000563941 CCDC144NLQ6NUI1 221 aa15.72■□□□□ 0.11
MSLN-205ENST00000563941 ZC2HC1AQ96GY0 325 aa15.72■□□□□ 0.11
MSLN-205ENST00000563941 ZNF414Q96IQ9 312 aa15.72■□□□□ 0.11
MSLN-205ENST00000563941 CHD8Q9HCK8 2581 aa15.72■□□□□ 0.11
MSLN-205ENST00000563941 HRNRQ86YZ3 2850 aaPredicted RBP15.72■□□□□ 0.11
MSLN-205ENST00000563941 ZNF785A8K8V0 405 aa15.71■□□□□ 0.11
MSLN-205ENST00000563941 M0QZK8 103 aa15.71■□□□□ 0.11
MSLN-205ENST00000563941 FOXA3P55318 350 aaPredicted RBP15.71■□□□□ 0.11
MSLN-205ENST00000563941 BCL6BQ8N143 479 aaPredicted RBP15.71■□□□□ 0.11
MSLN-205ENST00000563941 URB1-AS1Q96HZ7 61 aa15.71■□□□□ 0.11
MSLN-205ENST00000563941 ATRXP46100 2492 aa15.71■□□□□ 0.11
MSLN-205ENST00000563941 K7EQM0 130 aa15.71■□□□□ 0.11
MSLN-205ENST00000563941 TCAPO15273 167 aa15.71■□□□□ 0.11
MSLN-205ENST00000563941 C1orf122Q6ZSJ8 110 aa15.71■□□□□ 0.11
MSLN-205ENST00000563941 ZNF48Q96MX3 618 aaPredicted RBP15.71■□□□□ 0.11
MSLN-205ENST00000563941 ZFP30Q9Y2G7 519 aa15.71■□□□□ 0.11
MSLN-205ENST00000563941 PRB4P10163 310 aaPredicted RBP15.7■□□□□ 0.1
MSLN-205ENST00000563941 PSG3Q16557 428 aa15.7■□□□□ 0.1
MSLN-205ENST00000563941 DTX2Q86UW9 622 aa15.7■□□□□ 0.1
MSLN-205ENST00000563941 TTC9CQ8N5M4 171 aa15.7■□□□□ 0.1
MSLN-205ENST00000563941 Q8N6K4 173 aa15.7■□□□□ 0.1
MSLN-205ENST00000563941 ASCL2Q99929 193 aa15.7■□□□□ 0.1
MSLN-205ENST00000563941 PSG8Q9UQ74 426 aa15.7■□□□□ 0.1
MSLN-205ENST00000563941 F8W735 103 aaPredicted RBP15.7■□□□□ 0.1
MSLN-205ENST00000563941 CHEK1O14757 476 aa15.7■□□□□ 0.1
MSLN-205ENST00000563941 Q56UQ5 140 aa15.7■□□□□ 0.1
MSLN-205ENST00000563941 LCN12Q6JVE5 192 aa15.7■□□□□ 0.1
MSLN-205ENST00000563941 EBLN2Q6P2I7 272 aa15.7■□□□□ 0.1
MSLN-205ENST00000563941 S100A7AQ86SG5 101 aa15.7■□□□□ 0.1
MSLN-205ENST00000563941 KIR3DL3Q8N743 410 aa15.7■□□□□ 0.1
MSLN-205ENST00000563941 OOSP1A8MZH6 123 aa15.69■□□□□ 0.1
MSLN-205ENST00000563941 HAX1O00165 279 aa15.69■□□□□ 0.1
MSLN-205ENST00000563941 APOHP02749 345 aaPredicted RBP15.69■□□□□ 0.1
MSLN-205ENST00000563941 ZFP36P26651 326 aaKnown RBP15.69■□□□□ 0.1
MSLN-205ENST00000563941 FAM162BQ5T6X4 162 aa15.69■□□□□ 0.1
MSLN-205ENST00000563941 C21orf62Q9NYP8 219 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms