RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 ATP5SQ99766 215 aa12.31□□□□□ -0.44
NEK9-204ENST00000554258 PARD6GQ9BYG4 376 aaPredicted RBP12.31□□□□□ -0.44
NEK9-204ENST00000554258 ZFAND3Q9H8U3 227 aa12.31□□□□□ -0.44
NEK9-204ENST00000554258 SLC45A2Q9UMX9 530 aa12.31□□□□□ -0.44
NEK9-204ENST00000554258 PUS1Q9Y606 427 aaKnown RBP eCLIP12.31□□□□□ -0.44
NEK9-204ENST00000554258 AGRNO00468 2067 aa12.3□□□□□ -0.44
NEK9-204ENST00000554258 IGHV3-35A0A0C4DH35 117 aa12.3□□□□□ -0.44
NEK9-204ENST00000554258 SMCO3A2RU48 225 aa12.3□□□□□ -0.44
NEK9-204ENST00000554258 MPDU1O75352 247 aa12.3□□□□□ -0.44
NEK9-204ENST00000554258 FABP1P07148 127 aa12.3□□□□□ -0.44
NEK9-204ENST00000554258 RD3LP0DJH9 198 aa12.3□□□□□ -0.44
NEK9-204ENST00000554258 ZNF345Q14585 488 aa12.3□□□□□ -0.44
NEK9-204ENST00000554258 CLINT1Q14677 625 aa12.3□□□□□ -0.44
NEK9-204ENST00000554258 TMEM182Q6ZP80 229 aaPredicted RBP12.3□□□□□ -0.44
NEK9-204ENST00000554258 CYP2G1PQ6ZSU1 146 aa12.3□□□□□ -0.44
NEK9-204ENST00000554258 MGST2Q99735 147 aa12.3□□□□□ -0.44
NEK9-204ENST00000554258 RARRES2Q99969 163 aa12.3□□□□□ -0.44
NEK9-204ENST00000554258 AGPAT2O15120 278 aa12.29□□□□□ -0.44
NEK9-204ENST00000554258 ARPC5O15511 151 aa12.29□□□□□ -0.44
NEK9-204ENST00000554258 CFDP00746 253 aaPredicted RBP12.29□□□□□ -0.44
NEK9-204ENST00000554258 C8orf88P0DMB2 117 aa12.29□□□□□ -0.44
NEK9-204ENST00000554258 RPL35AP18077 110 aaKnown RBP12.29□□□□□ -0.44
NEK9-204ENST00000554258 SELENOTP62341 195 aa12.29□□□□□ -0.44
NEK9-204ENST00000554258 BTNL8Q6UX41 500 aa12.29□□□□□ -0.44
NEK9-204ENST00000554258 KCNRGQ8N5I3 272 aa12.29□□□□□ -0.44
NEK9-204ENST00000554258 HYLS1Q96M11 299 aa12.29□□□□□ -0.44
NEK9-204ENST00000554258 C18orf15Q96N68 181 aa12.29□□□□□ -0.44
NEK9-204ENST00000554258 WDR61Q9GZS3 305 aaKnown RBP12.29□□□□□ -0.44
NEK9-204ENST00000554258 IGLV2-18A0A075B6J9 118 aa12.28□□□□□ -0.44
NEK9-204ENST00000554258 A0A0D9SG52 128 aa12.28□□□□□ -0.44
NEK9-204ENST00000554258 TMEM213A2RRL7 107 aa12.28□□□□□ -0.44
NEK9-204ENST00000554258 DEFB4AO15263 64 aa12.28□□□□□ -0.44
NEK9-204ENST00000554258 LINC00869P0C866 280 aa12.28□□□□□ -0.44
NEK9-204ENST00000554258 CXCL2P19875 107 aa12.28□□□□□ -0.44
NEK9-204ENST00000554258 PLP1P60201 277 aa12.28□□□□□ -0.44
NEK9-204ENST00000554258 Q6ZR54 194 aa12.28□□□□□ -0.44
NEK9-204ENST00000554258 OR51G1Q8NGK1 321 aa12.28□□□□□ -0.44
NEK9-204ENST00000554258 SMIM3Q9BZL3 60 aa12.28□□□□□ -0.44
NEK9-204ENST00000554258 UFC1Q9Y3C8 167 aa12.28□□□□□ -0.44
NEK9-204ENST00000554258 U3KQE9 123 aa12.28□□□□□ -0.44
NEK9-204ENST00000554258 UBE2L5PA0A1B0GUS4 154 aa12.27□□□□□ -0.45
NEK9-204ENST00000554258 ZNF320A2RRD8 509 aa12.27□□□□□ -0.45
NEK9-204ENST00000554258 TAAR5O14804 337 aa12.27□□□□□ -0.45
NEK9-204ENST00000554258 CBLN1P23435 193 aa12.27□□□□□ -0.45
NEK9-204ENST00000554258 RPL29P47914 159 aaKnown RBP12.27□□□□□ -0.45
NEK9-204ENST00000554258 CAMLGP49069 296 aa12.27□□□□□ -0.45
NEK9-204ENST00000554258 RAB31Q13636 194 aa12.27□□□□□ -0.45
NEK9-204ENST00000554258 OPCMLQ14982 345 aa12.27□□□□□ -0.45
NEK9-204ENST00000554258 C1orf134Q5TEV5 83 aa12.27□□□□□ -0.45
NEK9-204ENST00000554258 CYTL1Q9NRR1 136 aa12.27□□□□□ -0.45
NEK9-204ENST00000554258 YIF1AO95070 293 aa12.26□□□□□ -0.45
NEK9-204ENST00000554258 IFNA5P01569 189 aa12.26□□□□□ -0.45
NEK9-204ENST00000554258 FGF7P21781 194 aa12.26□□□□□ -0.45
NEK9-204ENST00000554258 GATA2P23769 480 aaPredicted RBP12.26□□□□□ -0.45
NEK9-204ENST00000554258 CRYBB3P26998 211 aa12.26□□□□□ -0.45
NEK9-204ENST00000554258 AP2S1P53680 142 aaPredicted RBP12.26□□□□□ -0.45
NEK9-204ENST00000554258 LGALSLQ3ZCW2 172 aaPredicted RBP12.26□□□□□ -0.45
NEK9-204ENST00000554258 BPIFCQ8NFQ6 507 aa12.26□□□□□ -0.45
NEK9-204ENST00000554258 OR11H2Q8NH07 326 aa12.26□□□□□ -0.45
NEK9-204ENST00000554258 MARC2Q969Z3 335 aa12.26□□□□□ -0.45
NEK9-204ENST00000554258 RNF125Q96EQ8 232 aa12.26□□□□□ -0.45
NEK9-204ENST00000554258 NPCDR1Q9BY65 106 aa12.26□□□□□ -0.45
NEK9-204ENST00000554258 MAP6D1Q9H9H5 199 aa12.26□□□□□ -0.45
NEK9-204ENST00000554258 DAZ1Q9NQZ3 744 aaKnown RBP12.26□□□□□ -0.45
NEK9-204ENST00000554258 MRPL27Q9P0M9 148 aaKnown RBP12.26□□□□□ -0.45
NEK9-204ENST00000554258 UBQLN2Q9UHD9 624 aa12.26□□□□□ -0.45
NEK9-204ENST00000554258 IL4P05112 153 aa12.25□□□□□ -0.45
NEK9-204ENST00000554258 ZNF266Q14584 549 aa12.25□□□□□ -0.45
NEK9-204ENST00000554258 USF2Q15853 346 aaPredicted RBP12.25□□□□□ -0.45
NEK9-204ENST00000554258 GINS3Q9BRX5 216 aa12.25□□□□□ -0.45
NEK9-204ENST00000554258 C20orf24Q9BUV8 137 aa12.25□□□□□ -0.45
NEK9-204ENST00000554258 MLXQ9UH92 298 aa12.25□□□□□ -0.45
NEK9-204ENST00000554258 SMPXQ9UHP9 88 aa12.25□□□□□ -0.45
NEK9-204ENST00000554258 FAT1Q14517 4588 aa12.25□□□□□ -0.45
NEK9-204ENST00000554258 IGHV3OR16-8A0A075B7F1 116 aa12.24□□□□□ -0.45
NEK9-204ENST00000554258 TRAV10A0A0B4J240 114 aa12.24□□□□□ -0.45
NEK9-204ENST00000554258 EIF2B2P49770 351 aaKnown RBP12.24□□□□□ -0.45
NEK9-204ENST00000554258 TNP2Q05952 138 aa12.24□□□□□ -0.45
NEK9-204ENST00000554258 ZFP69Q49AA0 526 aa12.24□□□□□ -0.45
NEK9-204ENST00000554258 PXDC1Q5TGL8 231 aa12.24□□□□□ -0.45
NEK9-204ENST00000554258 SCGB1C1Q8TD33 95 aa12.24□□□□□ -0.45
NEK9-204ENST00000554258 ARV1Q9H2C2 271 aa12.24□□□□□ -0.45
NEK9-204ENST00000554258 VSIRQ9H7M9 311 aa12.24□□□□□ -0.45
NEK9-204ENST00000554258 IGHV7-4-1A0A0J9YVY3 117 aa12.23□□□□□ -0.45
NEK9-204ENST00000554258 NPPCP23582 126 aa12.23□□□□□ -0.45
NEK9-204ENST00000554258 MIC13Q5XKP0 118 aa12.23□□□□□ -0.45
NEK9-204ENST00000554258 RPL7L1Q6DKI1 246 aaKnown RBP12.23□□□□□ -0.45
NEK9-204ENST00000554258 LAMTOR1Q6IAA8 161 aa12.23□□□□□ -0.45
NEK9-204ENST00000554258 PATE2Q6UY27 113 aa12.23□□□□□ -0.45
NEK9-204ENST00000554258 TMUB2Q71RG4 321 aa12.23□□□□□ -0.45
NEK9-204ENST00000554258 ARPC5LQ9BPX5 153 aa12.23□□□□□ -0.45
NEK9-204ENST00000554258 TIMM9Q9Y5J7 89 aa12.23□□□□□ -0.45
NEK9-204ENST00000554258 HMCN2Q8NDA2 5059 aa12.22□□□□□ -0.45
NEK9-204ENST00000554258 CHEK1O14757 476 aa12.22□□□□□ -0.45
NEK9-204ENST00000554258 ZNF207O43670 478 aaKnown RBP12.22□□□□□ -0.45
NEK9-204ENST00000554258 HNRNPCP07910 306 aaKnown RBP eCLIP12.22□□□□□ -0.45
NEK9-204ENST00000554258 RBMY1CP0DJD4 496 aa12.22□□□□□ -0.45
NEK9-204ENST00000554258 RBPMS2Q6ZRY4 209 aaKnown RBP12.22□□□□□ -0.45
NEK9-204ENST00000554258 C9orf62Q8N4C0 152 aa12.22□□□□□ -0.45
NEK9-204ENST00000554258 METTL26Q96S19 204 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms