RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 LINC00052Q96N35 136 aa17.12■□□□□ 0.33
NEK9-203ENST00000553945 MIC13Q5XKP0 118 aa17.11■□□□□ 0.33
NEK9-203ENST00000553945 OR11H7Q8NGC8 314 aa17.11■□□□□ 0.33
NEK9-203ENST00000553945 SOCS3O14543 225 aa17.1■□□□□ 0.33
NEK9-203ENST00000553945 SPRY2O43597 315 aa17.1■□□□□ 0.33
NEK9-203ENST00000553945 PSMB3P49720 205 aa17.1■□□□□ 0.33
NEK9-203ENST00000553945 MEOX2P50222 304 aa17.1■□□□□ 0.33
NEK9-203ENST00000553945 PRR20EP86478 221 aa17.1■□□□□ 0.33
NEK9-203ENST00000553945 PRR20CP86479 221 aa17.1■□□□□ 0.33
NEK9-203ENST00000553945 PRR20DP86480 221 aa17.1■□□□□ 0.33
NEK9-203ENST00000553945 PRR20BP86481 221 aa17.1■□□□□ 0.33
NEK9-203ENST00000553945 PRR20AP86496 221 aa17.1■□□□□ 0.33
NEK9-203ENST00000553945 CLINT1Q14677 625 aa17.1■□□□□ 0.33
NEK9-203ENST00000553945 Q6ZRG5 221 aa17.1■□□□□ 0.33
NEK9-203ENST00000553945 TRPT1Q86TN4 253 aaKnown RBP17.1■□□□□ 0.33
NEK9-203ENST00000553945 EDA2RQ9HAV5 297 aa17.1■□□□□ 0.33
NEK9-203ENST00000553945 MBD2Q9UBB5 411 aa17.1■□□□□ 0.33
NEK9-203ENST00000553945 TP53TG1Q9Y2A0 90 aa17.1■□□□□ 0.33
NEK9-203ENST00000553945 MPDU1O75352 247 aa17.09■□□□□ 0.33
NEK9-203ENST00000553945 CA1P00915 261 aaPredicted RBP17.09■□□□□ 0.33
NEK9-203ENST00000553945 RPL7P18124 248 aaKnown RBP17.09■□□□□ 0.33
NEK9-203ENST00000553945 ATF4P18848 351 aaPredicted RBP17.09■□□□□ 0.33
NEK9-203ENST00000553945 OPCMLQ14982 345 aa17.09■□□□□ 0.33
NEK9-203ENST00000553945 SAMD13Q5VXD3 122 aa17.09■□□□□ 0.33
NEK9-203ENST00000553945 LINC00305Q7Z4B0 112 aa17.09■□□□□ 0.33
NEK9-203ENST00000553945 THAP6Q8TBB0 222 aa17.09■□□□□ 0.33
NEK9-203ENST00000553945 C16orf92Q96LL3 132 aa17.09■□□□□ 0.33
NEK9-203ENST00000553945 ELOA3CA0A087WX78 387 aaPredicted RBP17.08■□□□□ 0.32
NEK9-203ENST00000553945 ISLRO14498 428 aa17.08■□□□□ 0.32
NEK9-203ENST00000553945 RPL29P47914 159 aaKnown RBP17.08■□□□□ 0.32
NEK9-203ENST00000553945 FGL1Q08830 312 aa17.08■□□□□ 0.32
NEK9-203ENST00000553945 C10orf113Q5VZT2 155 aa17.08■□□□□ 0.32
NEK9-203ENST00000553945 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.08■□□□□ 0.32
NEK9-203ENST00000553945 TMEM37Q8WXS4 190 aa17.08■□□□□ 0.32
NEK9-203ENST00000553945 RNF183Q96D59 192 aa17.08■□□□□ 0.32
NEK9-203ENST00000553945 C17orf77Q96MU5 243 aa17.08■□□□□ 0.32
NEK9-203ENST00000553945 SLC39A9Q9NUM3 307 aa17.08■□□□□ 0.32
NEK9-203ENST00000553945 RNF24Q9Y225 148 aa17.08■□□□□ 0.32
NEK9-203ENST00000553945 RPL12P30050 165 aaKnown RBP17.07■□□□□ 0.32
NEK9-203ENST00000553945 B2MP61769 119 aa17.07■□□□□ 0.32
NEK9-203ENST00000553945 OXA1LQ15070 435 aa17.07■□□□□ 0.32
NEK9-203ENST00000553945 OR1L4Q8NGR5 311 aa17.07■□□□□ 0.32
NEK9-203ENST00000553945 DNAJC4Q9NNZ3 241 aa17.07■□□□□ 0.32
NEK9-203ENST00000553945 HSPB11Q9Y547 144 aa17.07■□□□□ 0.32
NEK9-203ENST00000553945 PXMP4Q9Y6I8 212 aa17.07■□□□□ 0.32
NEK9-203ENST00000553945 DEFB1P60022 68 aa17.06■□□□□ 0.32
NEK9-203ENST00000553945 CHAC2Q8WUX2 184 aa17.06■□□□□ 0.32
NEK9-203ENST00000553945 NPCDR1Q9BY65 106 aa17.06■□□□□ 0.32
NEK9-203ENST00000553945 AGRNO00468 2067 aa17.06■□□□□ 0.32
NEK9-203ENST00000553945 SPP1P10451 314 aa17.05■□□□□ 0.32
NEK9-203ENST00000553945 MORN3Q6PF18 240 aaPredicted RBP17.05■□□□□ 0.32
NEK9-203ENST00000553945 MUC7Q8TAX7 377 aa17.05■□□□□ 0.32
NEK9-203ENST00000553945 PFDN5Q99471 154 aa17.05■□□□□ 0.32
NEK9-203ENST00000553945 H3BMM0 161 aa17.04■□□□□ 0.32
NEK9-203ENST00000553945 LYL1P12980 280 aa17.04■□□□□ 0.32
NEK9-203ENST00000553945 MORN5Q5VZ52 161 aa17.04■□□□□ 0.32
NEK9-203ENST00000553945 C20orf173Q96LM9 149 aa17.04■□□□□ 0.32
NEK9-203ENST00000553945 ATP5SQ99766 215 aa17.04■□□□□ 0.32
NEK9-203ENST00000553945 SMIM3Q9BZL3 60 aa17.04■□□□□ 0.32
NEK9-203ENST00000553945 HLA-DRB4P13762 266 aa17.03■□□□□ 0.32
NEK9-203ENST00000553945 GDF5OSQ5U4N7 250 aa17.03■□□□□ 0.32
NEK9-203ENST00000553945 IGFL4Q6B9Z1 124 aa17.03■□□□□ 0.32
NEK9-203ENST00000553945 ZNF709Q8N972 641 aa17.03■□□□□ 0.32
NEK9-203ENST00000553945 GATAD1Q8WUU5 269 aa17.03■□□□□ 0.32
NEK9-203ENST00000553945 WDR61Q9GZS3 305 aaKnown RBP17.03■□□□□ 0.32
NEK9-203ENST00000553945 SAV1Q9H4B6 383 aaPredicted RBP17.03■□□□□ 0.32
NEK9-203ENST00000553945 RPRMQ9NS64 109 aa17.03■□□□□ 0.32
NEK9-203ENST00000553945 HLA-DRB4X5D2U9 266 aa17.03■□□□□ 0.32
NEK9-203ENST00000553945 A0A087X0K7 114 aa17.02■□□□□ 0.32
NEK9-203ENST00000553945 C4BPBP20851 252 aa17.02■□□□□ 0.32
NEK9-203ENST00000553945 FOXI2Q6ZQN5 318 aa17.02■□□□□ 0.32
NEK9-203ENST00000553945 BPIFA4PQ86YQ2 179 aa17.02■□□□□ 0.32
NEK9-203ENST00000553945 LRRC20Q8TCA0 184 aa17.02■□□□□ 0.32
NEK9-203ENST00000553945 TRAV8-2A0A0B4J237 113 aa17.01■□□□□ 0.31
NEK9-203ENST00000553945 TRAV5A0A0B4J249 113 aa17.01■□□□□ 0.31
NEK9-203ENST00000553945 C3orf84H3BNL1 204 aa17.01■□□□□ 0.31
NEK9-203ENST00000553945 MRPS12O15235 138 aaKnown RBP17.01■□□□□ 0.31
NEK9-203ENST00000553945 IGKV3-20P01619 116 aa17.01■□□□□ 0.31
NEK9-203ENST00000553945 GIG44P09565 113 aaPredicted RBP17.01■□□□□ 0.31
NEK9-203ENST00000553945 GIPP09681 153 aaPredicted RBP17.01■□□□□ 0.31
NEK9-203ENST00000553945 EBLN2Q6P2I7 272 aa17.01■□□□□ 0.31
NEK9-203ENST00000553945 RNF182Q8N6D2 247 aa17.01■□□□□ 0.31
NEK9-203ENST00000553945 F6UB75 175 aa17■□□□□ 0.31
NEK9-203ENST00000553945 IFNA5P01569 189 aa17■□□□□ 0.31
NEK9-203ENST00000553945 SNRPCP09234 159 aaKnown RBP17■□□□□ 0.31
NEK9-203ENST00000553945 TMEM41BQ5BJD5 291 aa17■□□□□ 0.31
NEK9-203ENST00000553945 ASB13Q8WXK3 278 aa17■□□□□ 0.31
NEK9-203ENST00000553945 KCNIP2Q9NS61 270 aa17■□□□□ 0.31
NEK9-203ENST00000553945 NUTF2P61970 127 aaKnown RBP16.99■□□□□ 0.31
NEK9-203ENST00000553945 GCSAMLQ5JQS6 135 aa16.99■□□□□ 0.31
NEK9-203ENST00000553945 SPATA31B1PQ5VZV4 182 aa16.99■□□□□ 0.31
NEK9-203ENST00000553945 OR4B1Q8NGF8 309 aa16.99■□□□□ 0.31
NEK9-203ENST00000553945 OR11H2Q8NH07 326 aa16.99■□□□□ 0.31
NEK9-203ENST00000553945 SCGB1C1Q8TD33 95 aa16.99■□□□□ 0.31
NEK9-203ENST00000553945 RARRES2Q99969 163 aa16.99■□□□□ 0.31
NEK9-203ENST00000553945 A0A0J9YWU9 116 aa16.98■□□□□ 0.31
NEK9-203ENST00000553945 C17orf112F2Z3M2 114 aa16.98■□□□□ 0.31
NEK9-203ENST00000553945 Q5BKY6 102 aa16.98■□□□□ 0.31
NEK9-203ENST00000553945 ZNF738Q8NE65 137 aa16.98■□□□□ 0.31
NEK9-203ENST00000553945 WFDC1Q9HC57 220 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms