RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 IGKV1OR2-108A0A075B7D4 117 aa8.64□□□□□ -1.03
CKAP4-202ENST00000552828 IGHV3-66A0A0C4DH42 116 aa8.64□□□□□ -1.03
CKAP4-202ENST00000552828 FAM24AA6NFZ4 105 aa8.64□□□□□ -1.03
CKAP4-202ENST00000552828 CFDP00746 253 aaPredicted RBP8.64□□□□□ -1.03
CKAP4-202ENST00000552828 APOHP02749 345 aaPredicted RBP8.64□□□□□ -1.03
CKAP4-202ENST00000552828 FGL1Q08830 312 aa8.64□□□□□ -1.03
CKAP4-202ENST00000552828 OR2F1Q13607 317 aa8.64□□□□□ -1.03
CKAP4-202ENST00000552828 USF2Q15853 346 aaPredicted RBP8.64□□□□□ -1.03
CKAP4-202ENST00000552828 LRRC37A5PQ49AS3 106 aa8.64□□□□□ -1.03
CKAP4-202ENST00000552828 TOR2AQ5JU69 321 aa8.64□□□□□ -1.03
CKAP4-202ENST00000552828 TMUB2Q71RG4 321 aa8.64□□□□□ -1.03
CKAP4-202ENST00000552828 TCF24Q7RTU0 167 aa8.64□□□□□ -1.03
CKAP4-202ENST00000552828 COMMD7Q86VX2 200 aa8.64□□□□□ -1.03
CKAP4-202ENST00000552828 STX12Q86Y82 276 aa8.64□□□□□ -1.03
CKAP4-202ENST00000552828 RNF125Q96EQ8 232 aa8.64□□□□□ -1.03
CKAP4-202ENST00000552828 HRH4Q9H3N8 390 aa8.64□□□□□ -1.03
CKAP4-202ENST00000552828 NPVFQ9HCQ7 196 aa8.64□□□□□ -1.03
CKAP4-202ENST00000552828 FBXL17Q9UF56 701 aa8.64□□□□□ -1.03
CKAP4-202ENST00000552828 PFDN2Q9UHV9 154 aa8.64□□□□□ -1.03
CKAP4-202ENST00000552828 RABAC1Q9UI14 185 aa8.64□□□□□ -1.03
CKAP4-202ENST00000552828 TRAV2A0A0B4J234 112 aa8.63□□□□□ -1.03
CKAP4-202ENST00000552828 E5RGE8 158 aa8.63□□□□□ -1.03
CKAP4-202ENST00000552828 DFFBO76075 338 aa8.63□□□□□ -1.03
CKAP4-202ENST00000552828 CST7O76096 145 aa8.63□□□□□ -1.03
CKAP4-202ENST00000552828 TFPI2P48307 235 aa8.63□□□□□ -1.03
CKAP4-202ENST00000552828 SULT1A1P50225 295 aa8.63□□□□□ -1.03
CKAP4-202ENST00000552828 RPL11P62913 178 aaKnown RBP8.63□□□□□ -1.03
CKAP4-202ENST00000552828 PAFAH1B2P68402 229 aa8.63□□□□□ -1.03
CKAP4-202ENST00000552828 SLC38A11Q08AI6 406 aa8.63□□□□□ -1.03
CKAP4-202ENST00000552828 ARL16Q0P5N6 197 aa8.63□□□□□ -1.03
CKAP4-202ENST00000552828 LILRB2Q8N423 598 aa8.63□□□□□ -1.03
CKAP4-202ENST00000552828 TMEM252Q8N6L7 170 aa8.63□□□□□ -1.03
CKAP4-202ENST00000552828 BPIFCQ8NFQ6 507 aa8.63□□□□□ -1.03
CKAP4-202ENST00000552828 PPP1R1CQ8WVI7 109 aa8.63□□□□□ -1.03
CKAP4-202ENST00000552828 PBDC1Q9BVG4 233 aa8.63□□□□□ -1.03
CKAP4-202ENST00000552828 APLNQ9ULZ1 77 aa8.63□□□□□ -1.03
CKAP4-202ENST00000552828 U3KQE9 123 aa8.63□□□□□ -1.03
CKAP4-202ENST00000552828 PKHD1P08F94 4074 aa8.63□□□□□ -1.03
CKAP4-202ENST00000552828 IGKV3-7A0A075B6H7 116 aa8.62□□□□□ -1.03
CKAP4-202ENST00000552828 A0A0D9SG52 128 aa8.62□□□□□ -1.03
CKAP4-202ENST00000552828 C11orf94C9JXX5 98 aa8.62□□□□□ -1.03
CKAP4-202ENST00000552828 CA1P00915 261 aaPredicted RBP8.62□□□□□ -1.03
CKAP4-202ENST00000552828 PET100P0DJ07 73 aa8.62□□□□□ -1.03
CKAP4-202ENST00000552828 NUP62P37198 522 aaPredicted RBP8.62□□□□□ -1.03
CKAP4-202ENST00000552828 P2RY1P47900 373 aa8.62□□□□□ -1.03
CKAP4-202ENST00000552828 LYZP61626 148 aa8.62□□□□□ -1.03
CKAP4-202ENST00000552828 HBG1P69891 147 aa8.62□□□□□ -1.03
CKAP4-202ENST00000552828 HBG2P69892 147 aa8.62□□□□□ -1.03
CKAP4-202ENST00000552828 TEPPQ6URK8 271 aa8.62□□□□□ -1.03
CKAP4-202ENST00000552828 SLC51BQ86UW2 128 aa8.62□□□□□ -1.03
CKAP4-202ENST00000552828 GBGT1Q8N5D6 347 aa8.62□□□□□ -1.03
CKAP4-202ENST00000552828 Q8NAQ8 132 aa8.62□□□□□ -1.03
CKAP4-202ENST00000552828 SLC25A31Q9H0C2 315 aa8.62□□□□□ -1.03
CKAP4-202ENST00000552828 MS4A6AQ9H2W1 248 aa8.62□□□□□ -1.03
CKAP4-202ENST00000552828 IGSF23A1L1A6 192 aa8.61□□□□□ -1.03
CKAP4-202ENST00000552828 HELTA6NFD8 242 aa8.61□□□□□ -1.03
CKAP4-202ENST00000552828 H0YIZ8 118 aa8.61□□□□□ -1.03
CKAP4-202ENST00000552828 DNASE2O00115 360 aaPredicted RBP8.61□□□□□ -1.03
CKAP4-202ENST00000552828 DEFB4AO15263 64 aa8.61□□□□□ -1.03
CKAP4-202ENST00000552828 BUB3O43684 328 aa8.61□□□□□ -1.03
CKAP4-202ENST00000552828 GIG44P09565 113 aaPredicted RBP8.61□□□□□ -1.03
CKAP4-202ENST00000552828 S100A7P31151 101 aa8.61□□□□□ -1.03
CKAP4-202ENST00000552828 SELENOTP62341 195 aa8.61□□□□□ -1.03
CKAP4-202ENST00000552828 RAB31Q13636 194 aa8.61□□□□□ -1.03
CKAP4-202ENST00000552828 ZNF345Q14585 488 aa8.61□□□□□ -1.03
CKAP4-202ENST00000552828 ATP6V1FQ16864 119 aa8.61□□□□□ -1.03
CKAP4-202ENST00000552828 C16orf54Q6UWD8 224 aa8.61□□□□□ -1.03
CKAP4-202ENST00000552828 CYP2G1PQ6ZSU1 146 aa8.61□□□□□ -1.03
CKAP4-202ENST00000552828 EIF4E3Q8N5X7 224 aaKnown RBP8.61□□□□□ -1.03
CKAP4-202ENST00000552828 SUN5Q8TC36 379 aa8.61□□□□□ -1.03
CKAP4-202ENST00000552828 LRRC20Q8TCA0 184 aa8.61□□□□□ -1.03
CKAP4-202ENST00000552828 OR5AC2Q9NZP5 309 aa8.61□□□□□ -1.03
CKAP4-202ENST00000552828 FXYD6-FXYD2A0A087WZ82 144 aa8.6□□□□□ -1.03
CKAP4-202ENST00000552828 ARPC5O15511 151 aa8.6□□□□□ -1.03
CKAP4-202ENST00000552828 ORM2P19652 201 aa8.6□□□□□ -1.03
CKAP4-202ENST00000552828 GATA2P23769 480 aaPredicted RBP8.6□□□□□ -1.03
CKAP4-202ENST00000552828 TMEM182Q6ZP80 229 aaPredicted RBP8.6□□□□□ -1.03
CKAP4-202ENST00000552828 KCNRGQ8N5I3 272 aa8.6□□□□□ -1.03
CKAP4-202ENST00000552828 RNF126Q9BV68 326 aa8.6□□□□□ -1.03
CKAP4-202ENST00000552828 ARL6Q9H0F7 186 aa8.6□□□□□ -1.03
CKAP4-202ENST00000552828 UQCC1Q9NVA1 299 aa8.6□□□□□ -1.03
CKAP4-202ENST00000552828 SLC45A2Q9UMX9 530 aa8.6□□□□□ -1.03
CKAP4-202ENST00000552828 IGLL5B9A064 214 aa8.59□□□□□ -1.03
CKAP4-202ENST00000552828 KRBOX1C9JBD0 128 aa8.59□□□□□ -1.03
CKAP4-202ENST00000552828 AGPAT2O15120 278 aa8.59□□□□□ -1.03
CKAP4-202ENST00000552828 NMBP08949 121 aa8.59□□□□□ -1.03
CKAP4-202ENST00000552828 RBMY1A1P0DJD3 496 aaKnown RBP8.59□□□□□ -1.03
CKAP4-202ENST00000552828 RBMY1CP0DJD4 496 aa8.59□□□□□ -1.03
CKAP4-202ENST00000552828 DEFB131AP59861 70 aa8.59□□□□□ -1.03
CKAP4-202ENST00000552828 NHLH2Q02577 135 aa8.59□□□□□ -1.03
CKAP4-202ENST00000552828 BAXQ07812 192 aa8.59□□□□□ -1.03
CKAP4-202ENST00000552828 RBMY1FQ15415 496 aaKnown RBP8.59□□□□□ -1.03
CKAP4-202ENST00000552828 VWC2Q2TAL6 325 aa8.59□□□□□ -1.03
CKAP4-202ENST00000552828 TMEM41BQ5BJD5 291 aa8.59□□□□□ -1.03
CKAP4-202ENST00000552828 C1orf194Q5T5A4 169 aa8.59□□□□□ -1.03
CKAP4-202ENST00000552828 LEMD1Q68G75 181 aa8.59□□□□□ -1.03
CKAP4-202ENST00000552828 ZNF546Q86UE3 836 aa8.59□□□□□ -1.03
CKAP4-202ENST00000552828 FAM24BQ8N5W8 94 aa8.59□□□□□ -1.03
CKAP4-202ENST00000552828 STXBP6Q8NFX7 210 aa8.59□□□□□ -1.03
CKAP4-202ENST00000552828 OR1B1Q8NGR6 318 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 409.1 ms