RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 NUTF2P61970 127 aaKnown RBP4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 SUPT4H1P63272 117 aaKnown RBP4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 PSG9Q00887 426 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 ZNF79Q15937 498 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 TMEM41BQ5BJD5 291 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 NMSQ5H8A3 153 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 AMTNQ6UX39 209 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 LGI3Q8N145 548 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 RNASEH2CQ8TDP1 164 aaKnown RBP4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 DTD1Q8TEA8 209 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 ZNF486Q96H40 463 aaPredicted RBP4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 ATG101Q9BSB4 218 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 TMEM208Q9BTX3 173 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 GPR132Q9UNW8 380 aa4.79□□□□□ -1.64
PRPF40B-214ENST00000551320 VPS13BQ7Z7G8 4022 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 FAT1Q14517 4588 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 A0A0J9YY99 117 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 J3KRW8 73 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 CRXO43186 299 aaPredicted RBP4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 CCNKO75909 580 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 SULT1A3P0DMM9 295 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 SULT1A4P0DMN0 295 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 SLC25A4P12235 298 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 ZNF182P17025 639 aaPredicted RBP4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 ORM2P19652 201 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 CNN1P51911 297 aaKnown RBP4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 AP2S1P53680 142 aaPredicted RBP4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 TAS2R19P59542 299 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 RRN3P1Q2M238 152 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 AARDQ4LEZ3 155 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 FOXI2Q6ZQN5 318 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 SPATA12Q7Z6I5 190 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 CLVS1Q8IUQ0 354 aaPredicted RBP4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 OR8I2Q8N0Y5 310 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 OR11H7Q8NGC8 314 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 OR52E5Q8NH55 327 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 ZNRF2Q8NHG8 242 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 C1QTNF4Q9BXJ3 329 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 MCUBQ9NWR8 336 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 GOLT1BQ9Y3E0 138 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 TMED3Q9Y3Q3 217 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 LINC00588Q9Y4M8 146 aa4.78□□□□□ -1.64
PRPF40B-214ENST00000551320 NBDYA0A0U1RRE5 68 aa4.77□□□□□ -1.65
PRPF40B-214ENST00000551320 PLAC8L1A1L4L8 177 aa4.77□□□□□ -1.65
PRPF40B-214ENST00000551320 GABARAPH6UMI1 98 aa4.77□□□□□ -1.65
PRPF40B-214ENST00000551320 WRBO00258 174 aa4.77□□□□□ -1.65
PRPF40B-214ENST00000551320 ATG12O94817 140 aa4.77□□□□□ -1.65
PRPF40B-214ENST00000551320 GABARAPO95166 117 aa4.77□□□□□ -1.65
PRPF40B-214ENST00000551320 ID1P41134 155 aa4.77□□□□□ -1.65
PRPF40B-214ENST00000551320 HAMPP81172 84 aa4.77□□□□□ -1.65
PRPF40B-214ENST00000551320 IL18Q14116 193 aa4.77□□□□□ -1.65
PRPF40B-214ENST00000551320 SMCO1Q147U7 214 aa4.77□□□□□ -1.65
PRPF40B-214ENST00000551320 EBLN2Q6P2I7 272 aa4.77□□□□□ -1.65
PRPF40B-214ENST00000551320 MZT2AQ6P582 158 aa4.77□□□□□ -1.65
PRPF40B-214ENST00000551320 TMED4Q7Z7H5 227 aa4.77□□□□□ -1.65
PRPF40B-214ENST00000551320 OR1B1Q8NGR6 318 aa4.77□□□□□ -1.65
PRPF40B-214ENST00000551320 OR1S1Q8NH92 325 aa4.77□□□□□ -1.65
PRPF40B-214ENST00000551320 SLC35E1Q96K37 410 aa4.77□□□□□ -1.65
PRPF40B-214ENST00000551320 SCRT2Q9NQ03 307 aa4.77□□□□□ -1.65
PRPF40B-214ENST00000551320 HSPB7Q9UBY9 170 aa4.77□□□□□ -1.65
PRPF40B-214ENST00000551320 TNFRSF18Q9Y5U5 241 aa4.77□□□□□ -1.65
PRPF40B-214ENST00000551320 TMEM56-RWDD3S4R434 201 aa4.77□□□□□ -1.65
PRPF40B-214ENST00000551320 MYCBP2O75592 4640 aa4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 A0A087WWL8 130 aa4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 SMIM9A6NGZ8 99 aa4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 ZNF98A6NK75 572 aa4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 SNRPGP15A8MWD9 76 aa4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 DISC1C4P0D8 188 aa4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 SCGB2A1O75556 95 aa4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 HOXB5P09067 269 aa4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 AKAIN1P0CW23 69 aa4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 PSMB3P49720 205 aa4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 HIST1H1AQ02539 215 aaPredicted RBP4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 OR5I1Q13606 314 aa4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 RAB32Q13637 225 aa4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 SSX7Q7RTT5 188 aa4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 C6orf223Q8N319 242 aa4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 SVIPQ8NHG7 77 aa4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 SMIM4Q8WVI0 70 aa4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 ZNF503Q96F45 646 aa4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 IGF2BP2-AS1Q96M15 143 aa4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 KRTAP9-9Q9BYP9 154 aa4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 KRTAP9-4Q9BYQ2 154 aa4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 VCX3AQ9NNX9 186 aa4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 NOP10Q9NPE3 64 aaKnown RBP4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 FLG2Q5D862 2391 aaPredicted RBP4.76□□□□□ -1.65
PRPF40B-214ENST00000551320 DMBT1Q9UGM3 2413 aaPredicted RBP4.75□□□□□ -1.65
PRPF40B-214ENST00000551320 SMCO3A2RU48 225 aa4.75□□□□□ -1.65
PRPF40B-214ENST00000551320 TMEM189A5PLL7 270 aa4.75□□□□□ -1.65
PRPF40B-214ENST00000551320 PRAC2D3DTV9 90 aa4.75□□□□□ -1.65
PRPF40B-214ENST00000551320 ISLRO14498 428 aa4.75□□□□□ -1.65
PRPF40B-214ENST00000551320 GSTZ1O43708 216 aaPredicted RBP4.75□□□□□ -1.65
PRPF40B-214ENST00000551320 TBPP20226 339 aa4.75□□□□□ -1.65
PRPF40B-214ENST00000551320 CCR6P51684 374 aa4.75□□□□□ -1.65
PRPF40B-214ENST00000551320 PAX9P55771 341 aa4.75□□□□□ -1.65
PRPF40B-214ENST00000551320 RRAS2P62070 204 aaPredicted RBP4.75□□□□□ -1.65
PRPF40B-214ENST00000551320 RHOBP62745 196 aa4.75□□□□□ -1.65
PRPF40B-214ENST00000551320 RNF212Q495C1 297 aa4.75□□□□□ -1.65
PRPF40B-214ENST00000551320 SPANXN5Q5MJ07 72 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms