RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 OXA1LQ15070 435 aa8.13□□□□□ -1.11
PRPF40B-212ENST00000551111 SPANXN5Q5MJ07 72 aa8.13□□□□□ -1.11
PRPF40B-212ENST00000551111 BAP18Q8IXM2 172 aa8.13□□□□□ -1.11
PRPF40B-212ENST00000551111 LRTM2Q8N967 370 aa8.13□□□□□ -1.11
PRPF40B-212ENST00000551111 FAM210BQ96KR6 192 aa8.13□□□□□ -1.11
PRPF40B-212ENST00000551111 SLC25A39Q9BZJ4 359 aaPredicted RBP8.13□□□□□ -1.11
PRPF40B-212ENST00000551111 RABL2AQ9UBK7 228 aaPredicted RBP8.13□□□□□ -1.11
PRPF40B-212ENST00000551111 PFDN2Q9UHV9 154 aa8.13□□□□□ -1.11
PRPF40B-212ENST00000551111 RABL2BQ9UNT1 228 aa8.13□□□□□ -1.11
PRPF40B-212ENST00000551111 ADAP1O75689 374 aa8.12□□□□□ -1.11
PRPF40B-212ENST00000551111 SFT2D2O95562 160 aa8.12□□□□□ -1.11
PRPF40B-212ENST00000551111 SLC25A6P12236 298 aa8.12□□□□□ -1.11
PRPF40B-212ENST00000551111 GALR1P47211 349 aa8.12□□□□□ -1.11
PRPF40B-212ENST00000551111 SRPXP78539 464 aa8.12□□□□□ -1.11
PRPF40B-212ENST00000551111 TNP2Q05952 138 aa8.12□□□□□ -1.11
PRPF40B-212ENST00000551111 FGL1Q08830 312 aa8.12□□□□□ -1.11
PRPF40B-212ENST00000551111 RNF212Q495C1 297 aa8.12□□□□□ -1.11
PRPF40B-212ENST00000551111 SPATA31B1PQ5VZV4 182 aa8.12□□□□□ -1.11
PRPF40B-212ENST00000551111 GGNBP1Q5YKI7 109 aa8.12□□□□□ -1.11
PRPF40B-212ENST00000551111 ACOT7LQ6ZUV0 252 aa8.12□□□□□ -1.11
PRPF40B-212ENST00000551111 OR1B1Q8NGR6 318 aa8.12□□□□□ -1.11
PRPF40B-212ENST00000551111 MCFD2Q8NI22 146 aa8.12□□□□□ -1.11
PRPF40B-212ENST00000551111 V9GYH0 126 aa8.12□□□□□ -1.11
PRPF40B-212ENST00000551111 DUXBA0A1W2PPF3 345 aa8.11□□□□□ -1.11
PRPF40B-212ENST00000551111 PMS2P5A8MQ11 134 aa8.11□□□□□ -1.11
PRPF40B-212ENST00000551111 FABP1P07148 127 aa8.11□□□□□ -1.11
PRPF40B-212ENST00000551111 SNRPCP09234 159 aaKnown RBP8.11□□□□□ -1.11
PRPF40B-212ENST00000551111 DEFB130BP0DP73 79 aa8.11□□□□□ -1.11
PRPF40B-212ENST00000551111 DEFB130AP0DP74 79 aa8.11□□□□□ -1.11
PRPF40B-212ENST00000551111 KIR3DS1Q14943 382 aa8.11□□□□□ -1.11
PRPF40B-212ENST00000551111 PYDC2Q56P42 97 aa8.11□□□□□ -1.11
PRPF40B-212ENST00000551111 C1orf134Q5TEV5 83 aa8.11□□□□□ -1.11
PRPF40B-212ENST00000551111 UHRF2Q96PU4 802 aa8.11□□□□□ -1.11
PRPF40B-212ENST00000551111 TMEM208Q9BTX3 173 aa8.11□□□□□ -1.11
PRPF40B-212ENST00000551111 APOBP04114 4563 aaKnown RBP8.1□□□□□ -1.11
PRPF40B-212ENST00000551111 H3BRN7 92 aa8.1□□□□□ -1.11
PRPF40B-212ENST00000551111 MED6O75586 246 aa8.1□□□□□ -1.11
PRPF40B-212ENST00000551111 MEOX2P50222 304 aa8.1□□□□□ -1.11
PRPF40B-212ENST00000551111 POLR2GP62487 172 aaKnown RBP eCLIP8.1□□□□□ -1.11
PRPF40B-212ENST00000551111 AKR1C1Q04828 323 aa8.1□□□□□ -1.11
PRPF40B-212ENST00000551111 PATE2Q6UY27 113 aa8.1□□□□□ -1.11
PRPF40B-212ENST00000551111 CYP2G1PQ6ZSU1 146 aa8.1□□□□□ -1.11
PRPF40B-212ENST00000551111 TOMM5Q8N4H5 51 aa8.1□□□□□ -1.11
PRPF40B-212ENST00000551111 BPIFCQ8NFQ6 507 aa8.1□□□□□ -1.11
PRPF40B-212ENST00000551111 OR4D5Q8NGN0 318 aa8.1□□□□□ -1.11
PRPF40B-212ENST00000551111 SHANK2-AS3Q9BTD1 123 aa8.1□□□□□ -1.11
PRPF40B-212ENST00000551111 SLC45A2Q9UMX9 530 aa8.1□□□□□ -1.11
PRPF40B-212ENST00000551111 FLVCR2Q9UPI3 526 aa8.1□□□□□ -1.11
PRPF40B-212ENST00000551111 TMED3Q9Y3Q3 217 aa8.1□□□□□ -1.11
PRPF40B-212ENST00000551111 TEX48A0A1B0GUV7 120 aa8.09□□□□□ -1.11
PRPF40B-212ENST00000551111 RRAS2P62070 204 aaPredicted RBP8.09□□□□□ -1.11
PRPF40B-212ENST00000551111 ID3Q02535 119 aa8.09□□□□□ -1.11
PRPF40B-212ENST00000551111 TMEM144Q7Z5S9 345 aa8.09□□□□□ -1.11
PRPF40B-212ENST00000551111 CIB3Q96Q77 187 aaPredicted RBP8.09□□□□□ -1.11
PRPF40B-212ENST00000551111 BCL7BQ9BQE9 202 aa8.09□□□□□ -1.11
PRPF40B-212ENST00000551111 TMEM147Q9BVK8 224 aa8.09□□□□□ -1.11
PRPF40B-212ENST00000551111 PARD6GQ9BYG4 376 aaPredicted RBP8.09□□□□□ -1.11
PRPF40B-212ENST00000551111 STRAPQ9Y3F4 350 aaKnown RBP8.09□□□□□ -1.11
PRPF40B-212ENST00000551111 SMCO3A2RU48 225 aa8.08□□□□□ -1.12
PRPF40B-212ENST00000551111 F5H768 121 aa8.08□□□□□ -1.12
PRPF40B-212ENST00000551111 MRPS12O15235 138 aaKnown RBP8.08□□□□□ -1.12
PRPF40B-212ENST00000551111 CFDP00746 253 aaPredicted RBP8.08□□□□□ -1.12
PRPF40B-212ENST00000551111 INSP01308 110 aa8.08□□□□□ -1.12
PRPF40B-212ENST00000551111 IL5P05113 134 aa8.08□□□□□ -1.12
PRPF40B-212ENST00000551111 HTN1P15515 57 aa8.08□□□□□ -1.12
PRPF40B-212ENST00000551111 CXCL3P19876 107 aa8.08□□□□□ -1.12
PRPF40B-212ENST00000551111 FAUP35544 74 aaKnown RBP8.08□□□□□ -1.12
PRPF40B-212ENST00000551111 ZNF738Q8NE65 137 aa8.08□□□□□ -1.12
PRPF40B-212ENST00000551111 ZNRF2Q8NHG8 242 aa8.08□□□□□ -1.12
PRPF40B-212ENST00000551111 DNAH5Q8TE73 4624 aa8.08□□□□□ -1.12
PRPF40B-212ENST00000551111 C9orf170A2RU37 121 aa8.07□□□□□ -1.12
PRPF40B-212ENST00000551111 LYRM9A8MSI8 78 aa8.07□□□□□ -1.12
PRPF40B-212ENST00000551111 BOLA2-SMG1P6H3BVE0 249 aa8.07□□□□□ -1.12
PRPF40B-212ENST00000551111 DUSP14O95147 198 aaKnown RBP8.07□□□□□ -1.12
PRPF40B-212ENST00000551111 NUDT3O95989 172 aa8.07□□□□□ -1.12
PRPF40B-212ENST00000551111 OR5G3P0C626 314 aa8.07□□□□□ -1.12
PRPF40B-212ENST00000551111 LINC00869P0C866 280 aa8.07□□□□□ -1.12
PRPF40B-212ENST00000551111 HIST1H1AQ02539 215 aaPredicted RBP8.07□□□□□ -1.12
PRPF40B-212ENST00000551111 ARL16Q0P5N6 197 aa8.07□□□□□ -1.12
PRPF40B-212ENST00000551111 SAMD13Q5VXD3 122 aa8.07□□□□□ -1.12
PRPF40B-212ENST00000551111 MORN5Q5VZ52 161 aa8.07□□□□□ -1.12
PRPF40B-212ENST00000551111 OR8A1Q8NGG7 326 aa8.07□□□□□ -1.12
PRPF40B-212ENST00000551111 LINC01587Q99440 93 aa8.07□□□□□ -1.12
PRPF40B-212ENST00000551111 SLC25A21Q9BQT8 299 aaPredicted RBP8.07□□□□□ -1.12
PRPF40B-212ENST00000551111 PSENENQ9NZ42 101 aa8.07□□□□□ -1.12
PRPF40B-212ENST00000551111 HIGD1AQ9Y241 93 aa8.07□□□□□ -1.12
PRPF40B-212ENST00000551111 LINC00588Q9Y4M8 146 aa8.07□□□□□ -1.12
PRPF40B-212ENST00000551111 NBDYA0A0U1RRE5 68 aa8.06□□□□□ -1.12
PRPF40B-212ENST00000551111 PRAC2D3DTV9 90 aa8.06□□□□□ -1.12
PRPF40B-212ENST00000551111 H3BTX0 84 aa8.06□□□□□ -1.12
PRPF40B-212ENST00000551111 SSSCA1O60232 199 aa8.06□□□□□ -1.12
PRPF40B-212ENST00000551111 HYPMO75409 117 aa8.06□□□□□ -1.12
PRPF40B-212ENST00000551111 METTL15P1P0C7V9 234 aa8.06□□□□□ -1.12
PRPF40B-212ENST00000551111 TSPOP30536 169 aa8.06□□□□□ -1.12
PRPF40B-212ENST00000551111 PLP1P60201 277 aa8.06□□□□□ -1.12
PRPF40B-212ENST00000551111 RHOBP62745 196 aa8.06□□□□□ -1.12
PRPF40B-212ENST00000551111 RPP30P78346 268 aaKnown RBP8.06□□□□□ -1.12
PRPF40B-212ENST00000551111 SLC38A11Q08AI6 406 aa8.06□□□□□ -1.12
PRPF40B-212ENST00000551111 PSG3Q16557 428 aa8.06□□□□□ -1.12
PRPF40B-212ENST00000551111 BAK1Q16611 211 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms