RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 FGF7P21781 194 aa19.11■□□□□ 0.65
CPSF6-205ENST00000550075 NHLH2Q02577 135 aa19.11■□□□□ 0.65
CPSF6-205ENST00000550075 ACTL10Q5JWF8 245 aa19.11■□□□□ 0.65
CPSF6-205ENST00000550075 UHRF2Q96PU4 802 aa19.11■□□□□ 0.65
CPSF6-205ENST00000550075 OVOL2Q9BRP0 275 aa19.11■□□□□ 0.65
CPSF6-205ENST00000550075 KNCNA6PVL3 124 aa19.1■□□□□ 0.65
CPSF6-205ENST00000550075 TRPT1Q86TN4 253 aaKnown RBP19.1■□□□□ 0.65
CPSF6-205ENST00000550075 RSG1Q9BU20 258 aa19.1■□□□□ 0.65
CPSF6-205ENST00000550075 CA1P00915 261 aaPredicted RBP19.09■□□□□ 0.65
CPSF6-205ENST00000550075 SPP1P10451 314 aa19.09■□□□□ 0.65
CPSF6-205ENST00000550075 OPCMLQ14982 345 aa19.09■□□□□ 0.65
CPSF6-205ENST00000550075 MORN3Q6PF18 240 aaPredicted RBP19.09■□□□□ 0.65
CPSF6-205ENST00000550075 OR1L4Q8NGR5 311 aa19.09■□□□□ 0.65
CPSF6-205ENST00000550075 CHAC2Q8WUX2 184 aa19.09■□□□□ 0.65
CPSF6-205ENST00000550075 RNF183Q96D59 192 aa19.09■□□□□ 0.65
CPSF6-205ENST00000550075 C16orf92Q96LL3 132 aa19.09■□□□□ 0.65
CPSF6-205ENST00000550075 LINC00052Q96N35 136 aa19.09■□□□□ 0.65
CPSF6-205ENST00000550075 PFDN5Q99471 154 aa19.09■□□□□ 0.65
CPSF6-205ENST00000550075 EDA2RQ9HAV5 297 aa19.09■□□□□ 0.65
CPSF6-205ENST00000550075 MBD2Q9UBB5 411 aa19.09■□□□□ 0.65
CPSF6-205ENST00000550075 SOCS3O14543 225 aa19.08■□□□□ 0.64
CPSF6-205ENST00000550075 RPL29P47914 159 aaKnown RBP19.08■□□□□ 0.64
CPSF6-205ENST00000550075 PRR20EP86478 221 aa19.08■□□□□ 0.64
CPSF6-205ENST00000550075 PRR20CP86479 221 aa19.08■□□□□ 0.64
CPSF6-205ENST00000550075 PRR20DP86480 221 aa19.08■□□□□ 0.64
CPSF6-205ENST00000550075 PRR20BP86481 221 aa19.08■□□□□ 0.64
CPSF6-205ENST00000550075 PRR20AP86496 221 aa19.08■□□□□ 0.64
CPSF6-205ENST00000550075 CLINT1Q14677 625 aa19.08■□□□□ 0.64
CPSF6-205ENST00000550075 TMEM41BQ5BJD5 291 aa19.08■□□□□ 0.64
CPSF6-205ENST00000550075 C10orf113Q5VZT2 155 aa19.08■□□□□ 0.64
CPSF6-205ENST00000550075 MIC13Q5XKP0 118 aa19.08■□□□□ 0.64
CPSF6-205ENST00000550075 PATE2Q6UY27 113 aa19.08■□□□□ 0.64
CPSF6-205ENST00000550075 LINC00305Q7Z4B0 112 aa19.08■□□□□ 0.64
CPSF6-205ENST00000550075 MUC7Q8TAX7 377 aa19.08■□□□□ 0.64
CPSF6-205ENST00000550075 GATAD1Q8WUU5 269 aa19.08■□□□□ 0.64
CPSF6-205ENST00000550075 RNF126Q9BV68 326 aa19.08■□□□□ 0.64
CPSF6-205ENST00000550075 KCNIP2Q9NS61 270 aa19.08■□□□□ 0.64
CPSF6-205ENST00000550075 CXCL3P19876 107 aa19.07■□□□□ 0.64
CPSF6-205ENST00000550075 B2MP61769 119 aa19.07■□□□□ 0.64
CPSF6-205ENST00000550075 FCN2Q15485 313 aa19.07■□□□□ 0.64
CPSF6-205ENST00000550075 THAP6Q8TBB0 222 aa19.07■□□□□ 0.64
CPSF6-205ENST00000550075 C3orf84H3BNL1 204 aa19.06■□□□□ 0.64
CPSF6-205ENST00000550075 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa19.06■□□□□ 0.64
CPSF6-205ENST00000550075 ASB13Q8WXK3 278 aa19.06■□□□□ 0.64
CPSF6-205ENST00000550075 DNAJC4Q9NNZ3 241 aa19.06■□□□□ 0.64
CPSF6-205ENST00000550075 SLC39A9Q9NUM3 307 aa19.06■□□□□ 0.64
CPSF6-205ENST00000550075 HSPB11Q9Y547 144 aa19.06■□□□□ 0.64
CPSF6-205ENST00000550075 PXMP4Q9Y6I8 212 aa19.06■□□□□ 0.64
CPSF6-205ENST00000550075 AGRNO00468 2067 aa19.05■□□□□ 0.64
CPSF6-205ENST00000550075 RPL12P30050 165 aaKnown RBP19.05■□□□□ 0.64
CPSF6-205ENST00000550075 SPATA31B1PQ5VZV4 182 aa19.05■□□□□ 0.64
CPSF6-205ENST00000550075 FOXI2Q6ZQN5 318 aa19.05■□□□□ 0.64
CPSF6-205ENST00000550075 ZNF709Q8N972 641 aa19.05■□□□□ 0.64
CPSF6-205ENST00000550075 NPCDR1Q9BY65 106 aa19.05■□□□□ 0.64
CPSF6-205ENST00000550075 RPRMQ9NS64 109 aa19.05■□□□□ 0.64
CPSF6-205ENST00000550075 A0A087X0K7 114 aa19.04■□□□□ 0.64
CPSF6-205ENST00000550075 HLA-DRB4P13762 266 aa19.04■□□□□ 0.64
CPSF6-205ENST00000550075 NUTF2P61970 127 aaKnown RBP19.04■□□□□ 0.64
CPSF6-205ENST00000550075 FGL1Q08830 312 aa19.04■□□□□ 0.64
CPSF6-205ENST00000550075 OXA1LQ15070 435 aa19.04■□□□□ 0.64
CPSF6-205ENST00000550075 BPIFA4PQ86YQ2 179 aa19.04■□□□□ 0.64
CPSF6-205ENST00000550075 OR11H7Q8NGC8 314 aa19.04■□□□□ 0.64
CPSF6-205ENST00000550075 ATP5SQ99766 215 aa19.04■□□□□ 0.64
CPSF6-205ENST00000550075 HLA-DRB4X5D2U9 266 aa19.04■□□□□ 0.64
CPSF6-205ENST00000550075 TMEM37Q8WXS4 190 aa19.03■□□□□ 0.64
CPSF6-205ENST00000550075 H3BMM0 161 aa19.02■□□□□ 0.64
CPSF6-205ENST00000550075 GIPP09681 153 aaPredicted RBP19.02■□□□□ 0.64
CPSF6-205ENST00000550075 LYL1P12980 280 aa19.02■□□□□ 0.64
CPSF6-205ENST00000550075 EBLN2Q6P2I7 272 aa19.02■□□□□ 0.64
CPSF6-205ENST00000550075 IL17DQ8TAD2 202 aa19.02■□□□□ 0.64
CPSF6-205ENST00000550075 LRRC20Q8TCA0 184 aa19.02■□□□□ 0.64
CPSF6-205ENST00000550075 SAV1Q9H4B6 383 aaPredicted RBP19.02■□□□□ 0.64
CPSF6-205ENST00000550075 DNAH7Q8WXX0 4024 aa19.02■□□□□ 0.63
CPSF6-205ENST00000550075 C17orf112F2Z3M2 114 aa19.01■□□□□ 0.63
CPSF6-205ENST00000550075 C1QTNF4Q9BXJ3 329 aa19.01■□□□□ 0.63
CPSF6-205ENST00000550075 WDR61Q9GZS3 305 aaKnown RBP19.01■□□□□ 0.63
CPSF6-205ENST00000550075 IFNA5P01569 189 aa19■□□□□ 0.63
CPSF6-205ENST00000550075 CXCL2P19875 107 aa19■□□□□ 0.63
CPSF6-205ENST00000550075 LCN15Q6UWW0 184 aa19■□□□□ 0.63
CPSF6-205ENST00000550075 C17orf77Q96MU5 243 aa18.99■□□□□ 0.63
CPSF6-205ENST00000550075 RARRES2Q99969 163 aa18.99■□□□□ 0.63
CPSF6-205ENST00000550075 C4BPBP20851 252 aa18.98■□□□□ 0.63
CPSF6-205ENST00000550075 SCGB1C1Q8TD33 95 aa18.98■□□□□ 0.63
CPSF6-205ENST00000550075 CLUHP3Q96NS8 147 aa18.98■□□□□ 0.63
CPSF6-205ENST00000550075 SMIM3Q9BZL3 60 aa18.98■□□□□ 0.63
CPSF6-205ENST00000550075 MRPS12O15235 138 aaKnown RBP18.97■□□□□ 0.63
CPSF6-205ENST00000550075 OR11H2Q8NH07 326 aa18.97■□□□□ 0.63
CPSF6-205ENST00000550075 C20orf173Q96LM9 149 aa18.97■□□□□ 0.63
CPSF6-205ENST00000550075 SLC50A1Q9BRV3 221 aa18.97■□□□□ 0.63
CPSF6-205ENST00000550075 A0A0J9YX75 114 aa18.96■□□□□ 0.63
CPSF6-205ENST00000550075 GDF5OSQ5U4N7 250 aa18.96■□□□□ 0.63
CPSF6-205ENST00000550075 MORN5Q5VZ52 161 aa18.96■□□□□ 0.63
CPSF6-205ENST00000550075 ZNF738Q8NE65 137 aa18.96■□□□□ 0.63
CPSF6-205ENST00000550075 OR4B1Q8NGF8 309 aa18.96■□□□□ 0.63
CPSF6-205ENST00000550075 TRAV8-2A0A0B4J237 113 aa18.95■□□□□ 0.62
CPSF6-205ENST00000550075 DEFB1P60022 68 aa18.95■□□□□ 0.62
CPSF6-205ENST00000550075 A0A0J9YWU9 116 aa18.94■□□□□ 0.62
CPSF6-205ENST00000550075 IGKV3-20P01619 116 aa18.94■□□□□ 0.62
CPSF6-205ENST00000550075 GIG44P09565 113 aaPredicted RBP18.94■□□□□ 0.62
CPSF6-205ENST00000550075 GUK1Q16774 197 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms