RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 H0YIZ8 118 aa7.08□□□□□ -1.28
HDAC7-229ENST00000549883 MRPS12O15235 138 aaKnown RBP7.08□□□□□ -1.28
HDAC7-229ENST00000549883 HYPMO75409 117 aa7.08□□□□□ -1.28
HDAC7-229ENST00000549883 ZNF705DP0CH99 300 aaPredicted RBP7.08□□□□□ -1.28
HDAC7-229ENST00000549883 ZNF705BP0CI00 300 aaPredicted RBP7.08□□□□□ -1.28
HDAC7-229ENST00000549883 SPP1P10451 314 aa7.08□□□□□ -1.28
HDAC7-229ENST00000549883 MORN3Q6PF18 240 aaPredicted RBP7.08□□□□□ -1.28
HDAC7-229ENST00000549883 TEPPQ6URK8 271 aa7.08□□□□□ -1.28
HDAC7-229ENST00000549883 TMEM252Q8N6L7 170 aa7.08□□□□□ -1.28
HDAC7-229ENST00000549883 ZNF709Q8N972 641 aa7.08□□□□□ -1.28
HDAC7-229ENST00000549883 C16orf92Q96LL3 132 aa7.08□□□□□ -1.28
HDAC7-229ENST00000549883 SLC35B3Q9H1N7 401 aa7.08□□□□□ -1.28
HDAC7-229ENST00000549883 SAV1Q9H4B6 383 aaPredicted RBP7.08□□□□□ -1.28
HDAC7-229ENST00000549883 SEPSECSQ9HD40 501 aaKnown RBP7.08□□□□□ -1.28
HDAC7-229ENST00000549883 OR5AC2Q9NZP5 309 aa7.08□□□□□ -1.28
HDAC7-229ENST00000549883 MGAT4CQ9UBM8 478 aa7.08□□□□□ -1.28
HDAC7-229ENST00000549883 PFDN2Q9UHV9 154 aa7.08□□□□□ -1.28
HDAC7-229ENST00000549883 H3BTX0 84 aa7.07□□□□□ -1.28
HDAC7-229ENST00000549883 ISLRO14498 428 aa7.07□□□□□ -1.28
HDAC7-229ENST00000549883 ID1P41134 155 aa7.07□□□□□ -1.28
HDAC7-229ENST00000549883 GALR1P47211 349 aa7.07□□□□□ -1.28
HDAC7-229ENST00000549883 H2BFSP57053 126 aa7.07□□□□□ -1.28
HDAC7-229ENST00000549883 NHLH2Q02577 135 aa7.07□□□□□ -1.28
HDAC7-229ENST00000549883 FGL1Q08830 312 aa7.07□□□□□ -1.28
HDAC7-229ENST00000549883 FAM78BQ5VT40 261 aa7.07□□□□□ -1.28
HDAC7-229ENST00000549883 MIC13Q5XKP0 118 aa7.07□□□□□ -1.28
HDAC7-229ENST00000549883 CEMP1Q6PRD7 247 aaPredicted RBP7.07□□□□□ -1.28
HDAC7-229ENST00000549883 FOXI2Q6ZQN5 318 aa7.07□□□□□ -1.28
HDAC7-229ENST00000549883 OR4B1Q8NGF8 309 aa7.07□□□□□ -1.28
HDAC7-229ENST00000549883 TMEM37Q8WXS4 190 aa7.07□□□□□ -1.28
HDAC7-229ENST00000549883 MARVELD1Q9BSK0 173 aa7.07□□□□□ -1.28
HDAC7-229ENST00000549883 ARV1Q9H2C2 271 aa7.07□□□□□ -1.28
HDAC7-229ENST00000549883 C11orf68Q9H3H3 251 aaKnown RBP7.07□□□□□ -1.28
HDAC7-229ENST00000549883 GPN1Q9HCN4 374 aaPredicted RBP7.07□□□□□ -1.28
HDAC7-229ENST00000549883 BATF3Q9NR55 127 aa7.07□□□□□ -1.28
HDAC7-229ENST00000549883 LYRM2Q9NU23 88 aaPredicted RBP7.07□□□□□ -1.28
HDAC7-229ENST00000549883 TRAV5A0A0B4J249 113 aa7.06□□□□□ -1.28
HDAC7-229ENST00000549883 A0A0J9YX75 114 aa7.06□□□□□ -1.28
HDAC7-229ENST00000549883 UBE2L5PA0A1B0GUS4 154 aa7.06□□□□□ -1.28
HDAC7-229ENST00000549883 ZNF705EA8MWA4 302 aaPredicted RBP7.06□□□□□ -1.28
HDAC7-229ENST00000549883 RAP2BP61225 183 aa7.06□□□□□ -1.28
HDAC7-229ENST00000549883 SELENOTP62341 195 aa7.06□□□□□ -1.28
HDAC7-229ENST00000549883 VWC2Q2TAL6 325 aa7.06□□□□□ -1.28
HDAC7-229ENST00000549883 LRRC37A5PQ49AS3 106 aa7.06□□□□□ -1.28
HDAC7-229ENST00000549883 ZNF767PQ75MW2 155 aa7.06□□□□□ -1.28
HDAC7-229ENST00000549883 LINC00305Q7Z4B0 112 aa7.06□□□□□ -1.28
HDAC7-229ENST00000549883 C11orf45Q8TAV5 145 aa7.06□□□□□ -1.28
HDAC7-229ENST00000549883 PHLDA1Q8WV24 401 aaPredicted RBP7.06□□□□□ -1.28
HDAC7-229ENST00000549883 GGACTQ9BVM4 153 aa7.06□□□□□ -1.28
HDAC7-229ENST00000549883 UQCC1Q9NVA1 299 aa7.06□□□□□ -1.28
HDAC7-229ENST00000549883 CELA1Q9UNI1 258 aa7.06□□□□□ -1.28
HDAC7-229ENST00000549883 WDR83OSQ9Y284 106 aa7.06□□□□□ -1.28
HDAC7-229ENST00000549883 IGHV3OR16-12A0A075B7B8 117 aa7.05□□□□□ -1.28
HDAC7-229ENST00000549883 PRM2P04554 102 aa7.05□□□□□ -1.28
HDAC7-229ENST00000549883 ATF4P18848 351 aaPredicted RBP7.05□□□□□ -1.28
HDAC7-229ENST00000549883 PVALBP20472 110 aaPredicted RBP7.05□□□□□ -1.28
HDAC7-229ENST00000549883 CAMLGP49069 296 aa7.05□□□□□ -1.28
HDAC7-229ENST00000549883 SULT1A1P50225 295 aa7.05□□□□□ -1.28
HDAC7-229ENST00000549883 PRR20EP86478 221 aa7.05□□□□□ -1.28
HDAC7-229ENST00000549883 PRR20CP86479 221 aa7.05□□□□□ -1.28
HDAC7-229ENST00000549883 PRR20DP86480 221 aa7.05□□□□□ -1.28
HDAC7-229ENST00000549883 PRR20BP86481 221 aa7.05□□□□□ -1.28
HDAC7-229ENST00000549883 PRR20AP86496 221 aa7.05□□□□□ -1.28
HDAC7-229ENST00000549883 OPCMLQ14982 345 aa7.05□□□□□ -1.28
HDAC7-229ENST00000549883 AMTNQ6UX39 209 aa7.05□□□□□ -1.28
HDAC7-229ENST00000549883 ZNF546Q86UE3 836 aa7.05□□□□□ -1.28
HDAC7-229ENST00000549883 RNF126Q9BV68 326 aa7.05□□□□□ -1.28
HDAC7-229ENST00000549883 RYR2Q92736 4967 aa7.05□□□□□ -1.28
HDAC7-229ENST00000549883 NUPR2A6NF83 97 aa7.04□□□□□ -1.28
HDAC7-229ENST00000549883 H3BQ15 152 aa7.04□□□□□ -1.28
HDAC7-229ENST00000549883 SLC17A3O00476 420 aa7.04□□□□□ -1.28
HDAC7-229ENST00000549883 COX7A2P2O60397 106 aa7.04□□□□□ -1.28
HDAC7-229ENST00000549883 PRAF2O60831 178 aa7.04□□□□□ -1.28
HDAC7-229ENST00000549883 MIFP14174 115 aa7.04□□□□□ -1.28
HDAC7-229ENST00000549883 RPL7P18124 248 aaKnown RBP7.04□□□□□ -1.28
HDAC7-229ENST00000549883 CXCL3P19876 107 aa7.04□□□□□ -1.28
HDAC7-229ENST00000549883 FGF7P21781 194 aa7.04□□□□□ -1.28
HDAC7-229ENST00000549883 MEOX2P50222 304 aa7.04□□□□□ -1.28
HDAC7-229ENST00000549883 CNN1P51911 297 aaKnown RBP7.04□□□□□ -1.28
HDAC7-229ENST00000549883 BAXQ07812 192 aa7.04□□□□□ -1.28
HDAC7-229ENST00000549883 GCSAMLQ5JQS6 135 aa7.04□□□□□ -1.28
HDAC7-229ENST00000549883 ZNF705AQ6ZN79 300 aaPredicted RBP7.04□□□□□ -1.28
HDAC7-229ENST00000549883 C1orf158Q8N1D5 194 aa7.04□□□□□ -1.28
HDAC7-229ENST00000549883 THAP6Q8TBB0 222 aa7.04□□□□□ -1.28
HDAC7-229ENST00000549883 GPR82Q96P67 336 aa7.04□□□□□ -1.28
HDAC7-229ENST00000549883 NMES1Q9C002 83 aa7.04□□□□□ -1.28
HDAC7-229ENST00000549883 RPRMQ9NS64 109 aa7.04□□□□□ -1.28
HDAC7-229ENST00000549883 A0A087X0K7 114 aa7.03□□□□□ -1.28
HDAC7-229ENST00000549883 A8MTW9 85 aa7.03□□□□□ -1.28
HDAC7-229ENST00000549883 ZNF705FA8MVS1 300 aaPredicted RBP7.03□□□□□ -1.28
HDAC7-229ENST00000549883 M0R2Z0 102 aa7.03□□□□□ -1.28
HDAC7-229ENST00000549883 SSNA1O43805 119 aa7.03□□□□□ -1.28
HDAC7-229ENST00000549883 JTBO76095 146 aa7.03□□□□□ -1.28
HDAC7-229ENST00000549883 S100A11P31949 105 aa7.03□□□□□ -1.28
HDAC7-229ENST00000549883 DEFA1P59665 94 aa7.03□□□□□ -1.28
HDAC7-229ENST00000549883 DEFA3P59666 94 aa7.03□□□□□ -1.28
HDAC7-229ENST00000549883 NUTF2P61970 127 aaKnown RBP7.03□□□□□ -1.28
HDAC7-229ENST00000549883 PSG9Q00887 426 aa7.03□□□□□ -1.28
HDAC7-229ENST00000549883 CLINT1Q14677 625 aa7.03□□□□□ -1.28
HDAC7-229ENST00000549883 TMEM41BQ5BJD5 291 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms