RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 H3BRN7 92 aa11.56□□□□□ -0.56
CHMP1A-206ENST00000549139 UBE2CO00762 179 aa11.56□□□□□ -0.56
CHMP1A-206ENST00000549139 OR5G3P0C626 314 aa11.56□□□□□ -0.56
CHMP1A-206ENST00000549139 ZNF688P0C7X2 276 aa11.56□□□□□ -0.56
CHMP1A-206ENST00000549139 CXCL3P19876 107 aa11.56□□□□□ -0.56
CHMP1A-206ENST00000549139 CAMLGP49069 296 aa11.56□□□□□ -0.56
CHMP1A-206ENST00000549139 BAXQ07812 192 aa11.56□□□□□ -0.56
CHMP1A-206ENST00000549139 OXA1LQ15070 435 aa11.56□□□□□ -0.56
CHMP1A-206ENST00000549139 RPP25LQ8N5L8 163 aaKnown RBP11.56□□□□□ -0.56
CHMP1A-206ENST00000549139 CHAC2Q8WUX2 184 aa11.56□□□□□ -0.56
CHMP1A-206ENST00000549139 GPR82Q96P67 336 aa11.56□□□□□ -0.56
CHMP1A-206ENST00000549139 SLC25A39Q9BZJ4 359 aaPredicted RBP11.56□□□□□ -0.56
CHMP1A-206ENST00000549139 ARL6Q9H0F7 186 aa11.56□□□□□ -0.56
CHMP1A-206ENST00000549139 DOK5Q9P104 306 aa11.56□□□□□ -0.56
CHMP1A-206ENST00000549139 RPL35AP18077 110 aaKnown RBP11.55□□□□□ -0.56
CHMP1A-206ENST00000549139 GALR1P47211 349 aa11.55□□□□□ -0.56
CHMP1A-206ENST00000549139 SNRPD3P62318 126 aaKnown RBP11.55□□□□□ -0.56
CHMP1A-206ENST00000549139 LEMD1Q68G75 181 aa11.55□□□□□ -0.56
CHMP1A-206ENST00000549139 PATE2Q6UY27 113 aa11.55□□□□□ -0.56
CHMP1A-206ENST00000549139 SHANK2-AS3Q9BTD1 123 aa11.55□□□□□ -0.56
CHMP1A-206ENST00000549139 SLC25A32Q9H2D1 315 aa11.55□□□□□ -0.56
CHMP1A-206ENST00000549139 SLC25A22Q9H936 323 aa11.55□□□□□ -0.56
CHMP1A-206ENST00000549139 RNF24Q9Y225 148 aa11.55□□□□□ -0.56
CHMP1A-206ENST00000549139 UBE2L5PA0A1B0GUS4 154 aa11.54□□□□□ -0.56
CHMP1A-206ENST00000549139 MPDU1O75352 247 aa11.54□□□□□ -0.56
CHMP1A-206ENST00000549139 RPL29P47914 159 aaKnown RBP11.54□□□□□ -0.56
CHMP1A-206ENST00000549139 PRR20EP86478 221 aa11.54□□□□□ -0.56
CHMP1A-206ENST00000549139 PRR20CP86479 221 aa11.54□□□□□ -0.56
CHMP1A-206ENST00000549139 PRR20DP86480 221 aa11.54□□□□□ -0.56
CHMP1A-206ENST00000549139 PRR20BP86481 221 aa11.54□□□□□ -0.56
CHMP1A-206ENST00000549139 PRR20AP86496 221 aa11.54□□□□□ -0.56
CHMP1A-206ENST00000549139 FCN2Q15485 313 aa11.54□□□□□ -0.56
CHMP1A-206ENST00000549139 Q6ZRG5 221 aa11.54□□□□□ -0.56
CHMP1A-206ENST00000549139 Q6ZWC4 215 aa11.54□□□□□ -0.56
CHMP1A-206ENST00000549139 OR11H7Q8NGC8 314 aa11.54□□□□□ -0.56
CHMP1A-206ENST00000549139 OR5C1Q8NGR4 320 aa11.54□□□□□ -0.56
CHMP1A-206ENST00000549139 CSTL1Q9H114 145 aa11.54□□□□□ -0.56
CHMP1A-206ENST00000549139 ARV1Q9H2C2 271 aa11.54□□□□□ -0.56
CHMP1A-206ENST00000549139 ELOA3CA0A087WX78 387 aaPredicted RBP11.53□□□□□ -0.56
CHMP1A-206ENST00000549139 ID1P41134 155 aa11.53□□□□□ -0.56
CHMP1A-206ENST00000549139 MEOX2P50222 304 aa11.53□□□□□ -0.56
CHMP1A-206ENST00000549139 OPCMLQ14982 345 aa11.53□□□□□ -0.56
CHMP1A-206ENST00000549139 PSMG4Q5JS54 123 aa11.53□□□□□ -0.56
CHMP1A-206ENST00000549139 SAMD13Q5VXD3 122 aa11.53□□□□□ -0.56
CHMP1A-206ENST00000549139 MIC13Q5XKP0 118 aa11.53□□□□□ -0.56
CHMP1A-206ENST00000549139 STHQ8IWL8 128 aa11.53□□□□□ -0.56
CHMP1A-206ENST00000549139 UHRF2Q96PU4 802 aa11.53□□□□□ -0.56
CHMP1A-206ENST00000549139 SCRT1Q9BWW7 348 aa11.53□□□□□ -0.56
CHMP1A-206ENST00000549139 MBD2Q9UBB5 411 aa11.53□□□□□ -0.56
CHMP1A-206ENST00000549139 SOCS3O14543 225 aa11.52□□□□□ -0.57
CHMP1A-206ENST00000549139 RPL7P18124 248 aaKnown RBP11.52□□□□□ -0.57
CHMP1A-206ENST00000549139 FGF7P21781 194 aa11.52□□□□□ -0.57
CHMP1A-206ENST00000549139 PSMB3P49720 205 aa11.52□□□□□ -0.57
CHMP1A-206ENST00000549139 LINC00305Q7Z4B0 112 aa11.52□□□□□ -0.57
CHMP1A-206ENST00000549139 THAP6Q8TBB0 222 aa11.52□□□□□ -0.57
CHMP1A-206ENST00000549139 ASB13Q8WXK3 278 aa11.52□□□□□ -0.57
CHMP1A-206ENST00000549139 TMEM37Q8WXS4 190 aa11.52□□□□□ -0.57
CHMP1A-206ENST00000549139 OVOL2Q9BRP0 275 aa11.52□□□□□ -0.57
CHMP1A-206ENST00000549139 RSG1Q9BU20 258 aa11.52□□□□□ -0.57
CHMP1A-206ENST00000549139 DNAJC4Q9NNZ3 241 aa11.52□□□□□ -0.57
CHMP1A-206ENST00000549139 TP53TG1Q9Y2A0 90 aa11.52□□□□□ -0.57
CHMP1A-206ENST00000549139 HSPB11Q9Y547 144 aa11.52□□□□□ -0.57
CHMP1A-206ENST00000549139 NUPR2A6NF83 97 aa11.51□□□□□ -0.57
CHMP1A-206ENST00000549139 ISLRO14498 428 aa11.51□□□□□ -0.57
CHMP1A-206ENST00000549139 COX7A2P2O60397 106 aa11.51□□□□□ -0.57
CHMP1A-206ENST00000549139 RPL12P30050 165 aaKnown RBP11.51□□□□□ -0.57
CHMP1A-206ENST00000549139 B2MP61769 119 aa11.51□□□□□ -0.57
CHMP1A-206ENST00000549139 C10orf113Q5VZT2 155 aa11.51□□□□□ -0.57
CHMP1A-206ENST00000549139 TRPT1Q86TN4 253 aaKnown RBP11.51□□□□□ -0.57
CHMP1A-206ENST00000549139 OR1L4Q8NGR5 311 aa11.51□□□□□ -0.57
CHMP1A-206ENST00000549139 C17orf77Q96MU5 243 aa11.51□□□□□ -0.57
CHMP1A-206ENST00000549139 SLC39A9Q9NUM3 307 aa11.51□□□□□ -0.57
CHMP1A-206ENST00000549139 KNCNA6PVL3 124 aa11.5□□□□□ -0.57
CHMP1A-206ENST00000549139 SPRY2O43597 315 aa11.5□□□□□ -0.57
CHMP1A-206ENST00000549139 PMS2P11Q13670 270 aa11.5□□□□□ -0.57
CHMP1A-206ENST00000549139 CLINT1Q14677 625 aa11.5□□□□□ -0.57
CHMP1A-206ENST00000549139 CEMP1Q6PRD7 247 aaPredicted RBP11.5□□□□□ -0.57
CHMP1A-206ENST00000549139 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.5□□□□□ -0.57
CHMP1A-206ENST00000549139 RNF183Q96D59 192 aa11.5□□□□□ -0.57
CHMP1A-206ENST00000549139 PFDN5Q99471 154 aa11.5□□□□□ -0.57
CHMP1A-206ENST00000549139 NPCDR1Q9BY65 106 aa11.5□□□□□ -0.57
CHMP1A-206ENST00000549139 WDR61Q9GZS3 305 aaKnown RBP11.5□□□□□ -0.57
CHMP1A-206ENST00000549139 PXMP4Q9Y6I8 212 aa11.5□□□□□ -0.57
CHMP1A-206ENST00000549139 A0A087X0K7 114 aa11.49□□□□□ -0.57
CHMP1A-206ENST00000549139 CXorf65A6NEN9 183 aa11.49□□□□□ -0.57
CHMP1A-206ENST00000549139 MRPS12O15235 138 aaKnown RBP11.49□□□□□ -0.57
CHMP1A-206ENST00000549139 GIPP09681 153 aaPredicted RBP11.49□□□□□ -0.57
CHMP1A-206ENST00000549139 ATF4P18848 351 aaPredicted RBP11.49□□□□□ -0.57
CHMP1A-206ENST00000549139 FGL1Q08830 312 aa11.49□□□□□ -0.57
CHMP1A-206ENST00000549139 ACTL10Q5JWF8 245 aa11.49□□□□□ -0.57
CHMP1A-206ENST00000549139 MORN3Q6PF18 240 aaPredicted RBP11.49□□□□□ -0.57
CHMP1A-206ENST00000549139 GATAD1Q8WUU5 269 aa11.49□□□□□ -0.57
CHMP1A-206ENST00000549139 C16orf92Q96LL3 132 aa11.49□□□□□ -0.57
CHMP1A-206ENST00000549139 LINC00052Q96N35 136 aa11.49□□□□□ -0.57
CHMP1A-206ENST00000549139 ATP5SQ99766 215 aa11.49□□□□□ -0.57
CHMP1A-206ENST00000549139 MUC4Q99102 2169 aa11.49□□□□□ -0.57
CHMP1A-206ENST00000549139 SPP1P10451 314 aa11.48□□□□□ -0.57
CHMP1A-206ENST00000549139 DEFB135Q30KP9 77 aa11.48□□□□□ -0.57
CHMP1A-206ENST00000549139 TMEM41BQ5BJD5 291 aa11.48□□□□□ -0.57
CHMP1A-206ENST00000549139 BPIFA4PQ86YQ2 179 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms