RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 C17orf112F2Z3M2 114 aa15.24■□□□□ 0.03
HMGA2-211ENST00000545998 OR11H4Q8NGC9 324 aa15.24■□□□□ 0.03
HMGA2-211ENST00000545998 GPR82Q96P67 336 aa15.24■□□□□ 0.03
HMGA2-211ENST00000545998 PFDN5Q99471 154 aa15.24■□□□□ 0.03
HMGA2-211ENST00000545998 KCNIP2Q9NS61 270 aa15.24■□□□□ 0.03
HMGA2-211ENST00000545998 ARPC5O15511 151 aa15.23■□□□□ 0.03
HMGA2-211ENST00000545998 FRMD6-AS1P0C7T7 363 aa15.23■□□□□ 0.03
HMGA2-211ENST00000545998 MAP6D1Q9H9H5 199 aa15.23■□□□□ 0.03
HMGA2-211ENST00000545998 GALR1P47211 349 aa15.22■□□□□ 0.03
HMGA2-211ENST00000545998 CMC4P56277 68 aaPredicted RBP15.22■□□□□ 0.03
HMGA2-211ENST00000545998 ZNF266Q14584 549 aa15.22■□□□□ 0.03
HMGA2-211ENST00000545998 MORN5Q5VZ52 161 aa15.22■□□□□ 0.03
HMGA2-211ENST00000545998 GATAD1Q8WUU5 269 aa15.22■□□□□ 0.03
HMGA2-211ENST00000545998 C17orf77Q96MU5 243 aa15.22■□□□□ 0.03
HMGA2-211ENST00000545998 TUBA4BQ9H853 241 aa15.22■□□□□ 0.03
HMGA2-211ENST00000545998 SRD5A3Q9H8P0 318 aa15.22■□□□□ 0.03
HMGA2-211ENST00000545998 RNF24Q9Y225 148 aa15.22■□□□□ 0.03
HMGA2-211ENST00000545998 GCSAMLQ5JQS6 135 aa15.21■□□□□ 0.03
HMGA2-211ENST00000545998 CITED4Q96RK1 184 aa15.21■□□□□ 0.03
HMGA2-211ENST00000545998 B9D2Q9BPU9 175 aa15.21■□□□□ 0.03
HMGA2-211ENST00000545998 MFFQ9GZY8 342 aa15.21■□□□□ 0.03
HMGA2-211ENST00000545998 NBEAL2Q6ZNJ1 2754 aa15.21■□□□□ 0.03
HMGA2-211ENST00000545998 HUWE1Q7Z6Z7 4374 aaKnown RBP15.21■□□□□ 0.02
HMGA2-211ENST00000545998 A0A1B0GVG6 124 aa15.2■□□□□ 0.02
HMGA2-211ENST00000545998 HMSDA8MTL9 139 aa15.2■□□□□ 0.02
HMGA2-211ENST00000545998 RPL7P18124 248 aaKnown RBP15.2■□□□□ 0.02
HMGA2-211ENST00000545998 TCTE3Q8IZS6 198 aa15.2■□□□□ 0.02
HMGA2-211ENST00000545998 SEPSECSQ9HD40 501 aaKnown RBP15.2■□□□□ 0.02
HMGA2-211ENST00000545998 ZNF688P0C7X2 276 aa15.19■□□□□ 0.02
HMGA2-211ENST00000545998 APRG1Q8IVJ8 170 aa15.19■□□□□ 0.02
HMGA2-211ENST00000545998 RFNGQ9Y644 331 aa15.19■□□□□ 0.02
HMGA2-211ENST00000545998 RBMY1BA6NDE4 496 aaKnown RBP15.19■□□□□ 0.02
HMGA2-211ENST00000545998 RBMY1EA6NEQ0 496 aaKnown RBP15.19■□□□□ 0.02
HMGA2-211ENST00000545998 SOCS3O14543 225 aa15.19■□□□□ 0.02
HMGA2-211ENST00000545998 MRPS12O15235 138 aaKnown RBP15.19■□□□□ 0.02
HMGA2-211ENST00000545998 RBMY1DP0C7P1 496 aaKnown RBP15.19■□□□□ 0.02
HMGA2-211ENST00000545998 DEFB131AP59861 70 aa15.19■□□□□ 0.02
HMGA2-211ENST00000545998 ZNF124Q15973 351 aa15.19■□□□□ 0.02
HMGA2-211ENST00000545998 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.19■□□□□ 0.02
HMGA2-211ENST00000545998 LINC00322Q6ZN03 302 aaPredicted RBP15.19■□□□□ 0.02
HMGA2-211ENST00000545998 TIMM9Q9Y5J7 89 aa15.19■□□□□ 0.02
HMGA2-211ENST00000545998 TRAV5A0A0B4J249 113 aa15.18■□□□□ 0.02
HMGA2-211ENST00000545998 MEOX2P50222 304 aa15.18■□□□□ 0.02
HMGA2-211ENST00000545998 ZNF345Q14585 488 aa15.18■□□□□ 0.02
HMGA2-211ENST00000545998 FFAR4Q5NUL3 377 aa15.18■□□□□ 0.02
HMGA2-211ENST00000545998 RPL7L1Q6DKI1 246 aaKnown RBP15.18■□□□□ 0.02
HMGA2-211ENST00000545998 AGRNO00468 2067 aa15.18■□□□□ 0.02
HMGA2-211ENST00000545998 A0A087X0K7 114 aa15.17■□□□□ 0.02
HMGA2-211ENST00000545998 ATF4P18848 351 aaPredicted RBP15.17■□□□□ 0.02
HMGA2-211ENST00000545998 SNRPD3P62318 126 aaKnown RBP15.17■□□□□ 0.02
HMGA2-211ENST00000545998 AKAP14Q86UN6 197 aa15.17■□□□□ 0.02
HMGA2-211ENST00000545998 BPIFA4PQ86YQ2 179 aa15.17■□□□□ 0.02
HMGA2-211ENST00000545998 KCNRGQ8N5I3 272 aa15.17■□□□□ 0.02
HMGA2-211ENST00000545998 HSD17B11Q8NBQ5 300 aa15.17■□□□□ 0.02
HMGA2-211ENST00000545998 TAAR5O14804 337 aa15.16■□□□□ 0.02
HMGA2-211ENST00000545998 FAM78BQ5VT40 261 aa15.16■□□□□ 0.02
HMGA2-211ENST00000545998 SAMD13Q5VXD3 122 aa15.16■□□□□ 0.02
HMGA2-211ENST00000545998 BORCS7-ASMTA0A0B4J1R7 106 aa15.15■□□□□ 0.02
HMGA2-211ENST00000545998 ISLRO14498 428 aa15.15■□□□□ 0.02
HMGA2-211ENST00000545998 ATP6V0CP27449 155 aa15.15■□□□□ 0.02
HMGA2-211ENST00000545998 PSMB3P49720 205 aa15.15■□□□□ 0.02
HMGA2-211ENST00000545998 PSMG4Q5JS54 123 aa15.15■□□□□ 0.02
HMGA2-211ENST00000545998 SPATA31B1PQ5VZV4 182 aa15.15■□□□□ 0.02
HMGA2-211ENST00000545998 SBSPONQ8IVN8 264 aa15.15■□□□□ 0.02
HMGA2-211ENST00000545998 CXCL2P19875 107 aa15.15■□□□□ 0.02
HMGA2-211ENST00000545998 ID1P41134 155 aa15.15■□□□□ 0.02
HMGA2-211ENST00000545998 OR2G3Q8NGZ4 309 aa15.15■□□□□ 0.02
HMGA2-211ENST00000545998 C16orf92Q96LL3 132 aa15.15■□□□□ 0.02
HMGA2-211ENST00000545998 ASCL2Q99929 193 aa15.15■□□□□ 0.02
HMGA2-211ENST00000545998 PSMG3Q9BT73 122 aaPredicted RBP15.15■□□□□ 0.02
HMGA2-211ENST00000545998 MRPL32Q9BYC8 188 aaKnown RBP15.15■□□□□ 0.02
HMGA2-211ENST00000545998 CYTL1Q9NRR1 136 aa15.15■□□□□ 0.02
HMGA2-211ENST00000545998 TENM3Q9P273 2699 aa15.14■□□□□ 0.01
HMGA2-211ENST00000545998 JTBO76095 146 aa15.14■□□□□ 0.01
HMGA2-211ENST00000545998 IGLC2P0DOY2 106 aa15.14■□□□□ 0.01
HMGA2-211ENST00000545998 MIR17HGQ75NE6 70 aa15.14■□□□□ 0.01
HMGA2-211ENST00000545998 FUT9Q9Y231 359 aa15.14■□□□□ 0.01
HMGA2-211ENST00000545998 LOC102724200A0A096LPH7 203 aaPredicted RBP15.13■□□□□ 0.01
HMGA2-211ENST00000545998 A0A0D9SG52 128 aa15.13■□□□□ 0.01
HMGA2-211ENST00000545998 HAGHQ16775 308 aa15.13■□□□□ 0.01
HMGA2-211ENST00000545998 FAM167A-AS1Q96KT0 104 aa15.13■□□□□ 0.01
HMGA2-211ENST00000545998 SLC25A2Q9BXI2 301 aa15.13■□□□□ 0.01
HMGA2-211ENST00000545998 SH3BGRL3Q9H299 93 aa15.13■□□□□ 0.01
HMGA2-211ENST00000545998 TRAV8-2A0A0B4J237 113 aa15.12■□□□□ 0.01
HMGA2-211ENST00000545998 C1QBP02746 253 aa15.12■□□□□ 0.01
HMGA2-211ENST00000545998 M6PRP20645 277 aa15.12■□□□□ 0.01
HMGA2-211ENST00000545998 ACOT6Q3I5F7 207 aaPredicted RBP15.12■□□□□ 0.01
HMGA2-211ENST00000545998 LINC00052Q96N35 136 aa15.12■□□□□ 0.01
HMGA2-211ENST00000545998 ARPC5LQ9BPX5 153 aa15.12■□□□□ 0.01
HMGA2-211ENST00000545998 HRH4Q9H3N8 390 aa15.12■□□□□ 0.01
HMGA2-211ENST00000545998 TMEM14CQ9P0S9 112 aa15.12■□□□□ 0.01
HMGA2-211ENST00000545998 H3BQ15 152 aa15.11■□□□□ 0.01
HMGA2-211ENST00000545998 SNRPCP09234 159 aaKnown RBP15.11■□□□□ 0.01
HMGA2-211ENST00000545998 SERF2P84101 59 aa15.11■□□□□ 0.01
HMGA2-211ENST00000545998 CD300CQ08708 224 aa15.11■□□□□ 0.01
HMGA2-211ENST00000545998 GNPNAT1Q96EK6 184 aaPredicted RBP15.11■□□□□ 0.01
HMGA2-211ENST00000545998 C20orf173Q96LM9 149 aa15.11■□□□□ 0.01
HMGA2-211ENST00000545998 KNCNA6PVL3 124 aa15.11■□□□□ 0.01
HMGA2-211ENST00000545998 RAB2AP61019 212 aa15.11■□□□□ 0.01
HMGA2-211ENST00000545998 RHOBP62745 196 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms