RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 LINC00299Q6ZSB3 139 aa5.6□□□□□ -1.51
SNHG1-223ENST00000545440 OR4D5Q8NGN0 318 aa5.6□□□□□ -1.51
SNHG1-223ENST00000545440 OR11H2Q8NH07 326 aa5.6□□□□□ -1.51
SNHG1-223ENST00000545440 RARRES2Q99969 163 aa5.6□□□□□ -1.51
SNHG1-223ENST00000545440 CCDC32Q9BV29 185 aa5.6□□□□□ -1.51
SNHG1-223ENST00000545440 PBDC1Q9BVG4 233 aa5.6□□□□□ -1.51
SNHG1-223ENST00000545440 C20orf85Q9H1P6 137 aa5.6□□□□□ -1.51
SNHG1-223ENST00000545440 FBXL17Q9UF56 701 aa5.6□□□□□ -1.51
SNHG1-223ENST00000545440 PAIP2BQ9ULR5 123 aaKnown RBP5.6□□□□□ -1.51
SNHG1-223ENST00000545440 FLVCR2Q9UPI3 526 aa5.6□□□□□ -1.51
SNHG1-223ENST00000545440 STRAPQ9Y3F4 350 aaKnown RBP5.6□□□□□ -1.51
SNHG1-223ENST00000545440 SACSQ9NZJ4 4579 aa5.6□□□□□ -1.51
SNHG1-223ENST00000545440 LINC00854A0A1B0GVQ3 168 aa5.59□□□□□ -1.51
SNHG1-223ENST00000545440 CXorf65A6NEN9 183 aa5.59□□□□□ -1.51
SNHG1-223ENST00000545440 SNRPGP15A8MWD9 76 aa5.59□□□□□ -1.51
SNHG1-223ENST00000545440 H3BP45 60 aa5.59□□□□□ -1.51
SNHG1-223ENST00000545440 LYRM1O43325 122 aa5.59□□□□□ -1.51
SNHG1-223ENST00000545440 GIG44P09565 113 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-223ENST00000545440 C4BPBP20851 252 aa5.59□□□□□ -1.51
SNHG1-223ENST00000545440 NKX2-1P43699 371 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-223ENST00000545440 LYZP61626 148 aa5.59□□□□□ -1.51
SNHG1-223ENST00000545440 AKR1C1Q04828 323 aa5.59□□□□□ -1.51
SNHG1-223ENST00000545440 ACTL10Q5JWF8 245 aa5.59□□□□□ -1.51
SNHG1-223ENST00000545440 SPANXN5Q5MJ07 72 aa5.59□□□□□ -1.51
SNHG1-223ENST00000545440 SAMD13Q5VXD3 122 aa5.59□□□□□ -1.51
SNHG1-223ENST00000545440 ACOT7LQ6ZUV0 252 aa5.59□□□□□ -1.51
SNHG1-223ENST00000545440 MITD1Q8WV92 249 aa5.59□□□□□ -1.51
SNHG1-223ENST00000545440 PPP1R14DQ9NXH3 145 aa5.59□□□□□ -1.51
SNHG1-223ENST00000545440 RYR2Q92736 4967 aa5.58□□□□□ -1.52
SNHG1-223ENST00000545440 KNCNA6PVL3 124 aa5.58□□□□□ -1.52
SNHG1-223ENST00000545440 FNDC10F2Z333 226 aa5.58□□□□□ -1.52
SNHG1-223ENST00000545440 SOCS3O14543 225 aa5.58□□□□□ -1.52
SNHG1-223ENST00000545440 PLA2G10O15496 165 aa5.58□□□□□ -1.52
SNHG1-223ENST00000545440 SSSCA1O60232 199 aa5.58□□□□□ -1.52
SNHG1-223ENST00000545440 SLPIP03973 132 aa5.58□□□□□ -1.52
SNHG1-223ENST00000545440 HLA-DRB4P13762 266 aa5.58□□□□□ -1.52
SNHG1-223ENST00000545440 S100A7P31151 101 aa5.58□□□□□ -1.52
SNHG1-223ENST00000545440 PSMB3P49720 205 aa5.58□□□□□ -1.52
SNHG1-223ENST00000545440 NUTF2P61970 127 aaKnown RBP5.58□□□□□ -1.52
SNHG1-223ENST00000545440 POLR2GP62487 172 aaKnown RBP eCLIP5.58□□□□□ -1.52
SNHG1-223ENST00000545440 OR2F1Q13607 317 aa5.58□□□□□ -1.52
SNHG1-223ENST00000545440 IAH1Q2TAA2 248 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-223ENST00000545440 TMEM144Q7Z5S9 345 aa5.58□□□□□ -1.52
SNHG1-223ENST00000545440 Q8NAQ8 132 aa5.58□□□□□ -1.52
SNHG1-223ENST00000545440 BPIFCQ8NFQ6 507 aa5.58□□□□□ -1.52
SNHG1-223ENST00000545440 PPP1R14BQ96C90 147 aa5.58□□□□□ -1.52
SNHG1-223ENST00000545440 SMIM8Q96KF7 97 aa5.58□□□□□ -1.52
SNHG1-223ENST00000545440 RAB40CQ96S21 281 aa5.58□□□□□ -1.52
SNHG1-223ENST00000545440 C1QTNF4Q9BXJ3 329 aa5.58□□□□□ -1.52
SNHG1-223ENST00000545440 MFFQ9GZY8 342 aa5.58□□□□□ -1.52
SNHG1-223ENST00000545440 PSENENQ9NZ42 101 aa5.58□□□□□ -1.52
SNHG1-223ENST00000545440 RCL1Q9Y2P8 373 aaKnown RBP5.58□□□□□ -1.52
SNHG1-223ENST00000545440 COX11Q9Y6N1 276 aa5.58□□□□□ -1.52
SNHG1-223ENST00000545440 HLA-DRB4X5D2U9 266 aa5.58□□□□□ -1.52
SNHG1-223ENST00000545440 ALMS1Q8TCU4 4167 aa5.57□□□□□ -1.52
SNHG1-223ENST00000545440 PMS2P5A8MQ11 134 aa5.57□□□□□ -1.52
SNHG1-223ENST00000545440 ZNF705EA8MWA4 302 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-223ENST00000545440 ISLRO14498 428 aa5.57□□□□□ -1.52
SNHG1-223ENST00000545440 TSC22D2O75157 780 aa5.57□□□□□ -1.52
SNHG1-223ENST00000545440 TCRBP04435 133 aa5.57□□□□□ -1.52
SNHG1-223ENST00000545440 MIFP14174 115 aa5.57□□□□□ -1.52
SNHG1-223ENST00000545440 ID1P41134 155 aa5.57□□□□□ -1.52
SNHG1-223ENST00000545440 MEOX2P50222 304 aa5.57□□□□□ -1.52
SNHG1-223ENST00000545440 TAS2R30P59541 319 aa5.57□□□□□ -1.52
SNHG1-223ENST00000545440 DLK1P80370 383 aa5.57□□□□□ -1.52
SNHG1-223ENST00000545440 CEMP1Q6PRD7 247 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-223ENST00000545440 TMEM14EPQ6UXP3 125 aa5.57□□□□□ -1.52
SNHG1-223ENST00000545440 OR8I2Q8N0Y5 310 aa5.57□□□□□ -1.52
SNHG1-223ENST00000545440 ZBTB8BQ8NAP8 495 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-223ENST00000545440 CSNK1G2-AS1Q8NCQ2 148 aa5.57□□□□□ -1.52
SNHG1-223ENST00000545440 C11orf45Q8TAV5 145 aa5.57□□□□□ -1.52
SNHG1-223ENST00000545440 GPR82Q96P67 336 aa5.57□□□□□ -1.52
SNHG1-223ENST00000545440 CTDSP1Q9GZU7 261 aa5.57□□□□□ -1.52
SNHG1-223ENST00000545440 HRH4Q9H3N8 390 aa5.57□□□□□ -1.52
SNHG1-223ENST00000545440 NUDT15Q9NV35 164 aa5.57□□□□□ -1.52
SNHG1-223ENST00000545440 KLK5Q9Y337 293 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-223ENST00000545440 DNAH1Q9P2D7 4330 aa5.56□□□□□ -1.52
SNHG1-223ENST00000545440 TRAV6A0A075B6T7 132 aa5.56□□□□□ -1.52
SNHG1-223ENST00000545440 SMCO3A2RU48 225 aa5.56□□□□□ -1.52
SNHG1-223ENST00000545440 H3BMM0 161 aa5.56□□□□□ -1.52
SNHG1-223ENST00000545440 K7EPK0 472 aa5.56□□□□□ -1.52
SNHG1-223ENST00000545440 GALR1P47211 349 aa5.56□□□□□ -1.52
SNHG1-223ENST00000545440 PAX9P55771 341 aa5.56□□□□□ -1.52
SNHG1-223ENST00000545440 SELENOTP62341 195 aa5.56□□□□□ -1.52
SNHG1-223ENST00000545440 ZNF846Q147U1 533 aa5.56□□□□□ -1.52
SNHG1-223ENST00000545440 SPATA31B1PQ5VZV4 182 aa5.56□□□□□ -1.52
SNHG1-223ENST00000545440 FOXI2Q6ZQN5 318 aa5.56□□□□□ -1.52
SNHG1-223ENST00000545440 PRSS3P2Q8NHM4 247 aa5.56□□□□□ -1.52
SNHG1-223ENST00000545440 ZNF431Q8TF32 576 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-223ENST00000545440 PHLDA1Q8WV24 401 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-223ENST00000545440 S100ZQ8WXG8 99 aa5.56□□□□□ -1.52
SNHG1-223ENST00000545440 TMEM147Q9BVK8 224 aa5.56□□□□□ -1.52
SNHG1-223ENST00000545440 TM2D2Q9BX73 214 aa5.56□□□□□ -1.52
SNHG1-223ENST00000545440 SAV1Q9H4B6 383 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-223ENST00000545440 TBC1D24Q9ULP9 559 aa5.56□□□□□ -1.52
SNHG1-223ENST00000545440 IGHV4-28A0A0C4DH34 117 aa5.55□□□□□ -1.52
SNHG1-223ENST00000545440 ZNF98A6NK75 572 aa5.55□□□□□ -1.52
SNHG1-223ENST00000545440 H3BRN7 92 aa5.55□□□□□ -1.52
SNHG1-223ENST00000545440 IL5P05113 134 aa5.55□□□□□ -1.52
SNHG1-223ENST00000545440 METTL15P1P0C7V9 234 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 187.6 ms