RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 IGHV3-72A0A0B4J1Y9 119 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 IGHV1-3A0A0C4DH29 117 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 IGHV1-69-2A0A0G2JMI3 117 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 C2orf70A6NJV1 201 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 B9A039 149 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 BUB1B-PAK6H3BSN5 160 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 I3L2K1 104 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 J3KRW8 73 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 ENSAO43768 121 aaKnown RBP4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 IGLC1P0CG04 106 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 FOSL1P15407 271 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 CNTFRP26992 372 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 APOBEC3AP31941 199 aaPredicted RBP4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 UBE2G1P62253 170 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 RBPJQ06330 500 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 PMCHL1Q16048 86 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 SPATA45Q537H7 98 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 FAM120AOSQ5T036 256 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 EBLN2Q6P2I7 272 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 GFRALQ6UXV0 394 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 FAM19A2Q8N3H0 131 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 GTSF1Q8WW33 167 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 C22orf15Q8WYQ4 148 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 CLEC7AQ9BXN2 247 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 Q9H3A6 140 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 DYNLRB1Q9NP97 96 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 NGBQ9NPG2 151 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 OTORQ9NRC9 128 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 C1RLQ9NZP8 487 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 UQCR10Q9UDW1 63 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 ICE1Q9Y2F5 2266 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 NAV3Q8IVL0 2385 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 C20orf202A1L168 122 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 ZNF785A8K8V0 405 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 A8MWL6 223 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 DLEU1O43261 78 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 KALRNO60229 2985 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 IGLV1-40P01703 118 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 IGLV2-11P01706 119 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 APOHP02749 345 aaPredicted RBP4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 ZNF25P17030 456 aaPredicted RBP4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 FOXA3P55318 350 aaPredicted RBP4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 HBBP68871 147 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 FAM162BQ5T6X4 162 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 PRR27Q6MZM9 219 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 TCF24Q7RTU0 167 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 PPP1R27Q86WC6 154 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 KLHDC1Q8N7A1 406 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 BLNKQ8WV28 456 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 BORCS7Q96B45 105 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 TMEM208Q9BTX3 173 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 LPAR2Q9HBW0 351 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 HIGD1AQ9Y241 93 aa4.12□□□□□ -1.75
ATPAF1-212ENST00000542495 COL6A6A6NMZ7 2263 aa4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 ASH1LQ9NR48 2969 aaKnown RBP4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 PRRC2CQ9Y520 2896 aaKnown RBP4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 TRAV9-2A0A087WT02 112 aa4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 K7ENP7 123 aa4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 CRXO43186 299 aaPredicted RBP4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 HSBP1O75506 76 aa4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 IGKV1-17P01599 117 aa4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 P01737 135 aa4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 PSG1P11464 419 aa4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 BTF3P20290 206 aaKnown RBP4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 NTF3P20783 257 aa4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 G0S2P27469 103 aa4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 GPR6P46095 362 aaPredicted RBP4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 CAMPP49913 170 aa4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 COL5A1-AS1Q5SY13 56 aa4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 CYB5R2Q6BCY4 276 aa4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 RBPMS2Q6ZRY4 209 aaKnown RBP4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 LHFPL4Q7Z7J7 247 aa4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 Q86TA4 180 aa4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 GATD1Q8NB37 220 aa4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 LY6G5BQ8NDX9 201 aa4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 SRSF12Q8WXF0 261 aaKnown RBP4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 CHCHD1Q96BP2 118 aaKnown RBP4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 NDFIP1Q9BT67 221 aa4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 SLC25A39Q9BZJ4 359 aaPredicted RBP4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 MRPS16Q9Y3D3 137 aaKnown RBP4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 INSIG2Q9Y5U4 225 aa4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 FLNBO75369 2602 aaKnown RBP4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 MGAQ8IWI9 3026 aa4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 SETXQ7Z333 2677 aaKnown RBP4.11□□□□□ -1.75
ATPAF1-212ENST00000542495 A6NNC1 897 aa4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 K7EIM0 57 aa4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 M0R2Z0 102 aa4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 MRPS12O15235 138 aaKnown RBP4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 LINC00614P0C842 121 aa4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 DLX1P56177 255 aa4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 LY6DQ14210 128 aa4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 LDLRAD2Q5SZI1 272 aa4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 LEMD1Q68G75 181 aa4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 LCN12Q6JVE5 192 aa4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 RNASEKQ6P5S7 137 aaKnown RBP4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 C1orf122Q6ZSJ8 110 aa4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 SPATA12Q7Z6I5 190 aa4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 WFDC3Q8IUB2 231 aa4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 SGK494Q96LW2 274 aa4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 VKORC1Q9BQB6 163 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms