RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 TMEM116Q8NCL8 245 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 C18orf32Q8TCD1 76 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 ARL2-SNX15V9GYD0 113 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 FAM231BA6NCW3 169 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 IZUMO1RA6ND01 250 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 FAM181BA6NEQ2 426 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 K7ERU9 68 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 BRI3O95415 125 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 EMP1P54849 157 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 ERVK11-1P61568 191 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 RHOGP84095 191 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 SSX8Q7RTT4 187 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 PDPNQ86YL7 162 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 ZNF418Q8TF45 676 aaPredicted RBP4.27□□□□□ -1.73
PROM1-220ENST00000540805 FBXL15Q9H469 300 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 TMEM167BQ9NRX6 74 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 TMEM140Q9NV12 185 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 SETXQ7Z333 2677 aaKnown RBP4.27□□□□□ -1.73
PROM1-220ENST00000540805 PRRC2AP48634 2157 aaKnown RBP4.27□□□□□ -1.73
PROM1-220ENST00000540805 ISLRO14498 428 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 WISP2O76076 250 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 RPS20P60866 119 aaKnown RBP4.27□□□□□ -1.73
PROM1-220ENST00000540805 RPL24P83731 157 aaKnown RBP4.27□□□□□ -1.73
PROM1-220ENST00000540805 TM4SF20Q53R12 229 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 TMEM177Q53S58 311 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 TEPPQ6URK8 271 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 WDR86Q86TI4 376 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 PRNDQ9UKY0 176 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 OR51B2Q9Y5P1 312 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 IGKV3OR2-268A0A0C4DH90 116 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 SMIM27A0A1W2PRY6 76 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 FAM90A9PA6NNJ1 464 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 PRSS46E5RG02 174 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 G3V4G9 280 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 COL8A1P27658 744 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 FCGR2BP31994 310 aaPredicted RBP4.27□□□□□ -1.73
PROM1-220ENST00000540805 VDAC2P45880 294 aaPredicted RBP4.27□□□□□ -1.73
PROM1-220ENST00000540805 LINC00205P59089 165 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 RPL8P62917 257 aaKnown RBP4.27□□□□□ -1.73
PROM1-220ENST00000540805 RPL39P5Q59GN2 51 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 BVES-AS1Q5T3Y7 98 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 SLC35E4Q6ICL7 350 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 RNASEKQ6P5S7 137 aaKnown RBP4.27□□□□□ -1.73
PROM1-220ENST00000540805 RNASE6Q93091 150 aaKnown RBP4.27□□□□□ -1.73
PROM1-220ENST00000540805 PLSCR4Q9NRQ2 329 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 H0YJW9 148 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 PSPNO60542 156 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 MGPP08493 103 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 PAX2Q02962 417 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 SLAQ13239 276 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 MIR17HGQ75NE6 70 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 NHLRC2Q8NBF2 726 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 OR52E5Q8NH55 327 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 DDB2Q92466 427 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 C16orf92Q96LL3 132 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 SSBP4Q9BWG4 385 aaPredicted RBP4.26□□□□□ -1.73
PROM1-220ENST00000540805 SPRR3Q9UBC9 169 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 SS18L2Q9UHA2 77 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 CRXO43186 299 aaPredicted RBP4.26□□□□□ -1.73
PROM1-220ENST00000540805 PRB1P04280 392 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 OR9G1Q8NH87 305 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 PRSS3P2Q8NHM4 247 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 SMIM12Q96EX1 92 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 HCFC1P51610 2035 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 C17orf100A8MU93 164 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 TRGV3P03979 118 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 IGFBP2P18065 325 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 MC5RP33032 325 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 ANXA2RQ3ZCQ2 193 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 RASL11AQ6T310 242 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 WIPF2Q8TF74 440 aaPredicted RBP4.26□□□□□ -1.73
PROM1-220ENST00000540805 NEU4Q8WWR8 484 aaPredicted RBP4.26□□□□□ -1.73
PROM1-220ENST00000540805 TCF19Q9Y242 345 aa4.26□□□□□ -1.73
PROM1-220ENST00000540805 TEX48A0A1B0GUV7 120 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 OR4C46A6NHA9 309 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 H3BUT2 72 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 IGLC1P0CG04 106 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 DUTP33316 252 aaKnown RBP4.25□□□□□ -1.73
PROM1-220ENST00000540805 ZNF138P52744 262 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 ATP5G2Q06055 141 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 KLF5Q13887 457 aaPredicted RBP4.25□□□□□ -1.73
PROM1-220ENST00000540805 BRD3OSQ6XYD6 125 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 FA2HQ7L5A8 372 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 OR10W1Q8NGF6 305 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 C1orf159Q96HA4 380 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 TMEM70Q9BUB7 260 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 SSBP3Q9BWW4 388 aaPredicted RBP4.25□□□□□ -1.73
PROM1-220ENST00000540805 ST20Q9HBF5 79 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 ITPR1Q14643 2758 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 TRAV40A0A0B4J280 105 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 GAGE10A6NGK3 116 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 IGLV2-8P01709 118 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 KIR2DS2P43631 304 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 MFAP2P55001 183 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 FAM162BQ5T6X4 162 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 C10orf113Q5VZT2 155 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 RPRMLQ8N4K4 120 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 COQ2Q96H96 371 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 VKORC1Q9BQB6 163 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 IDI2-AS1Q9NZ38 188 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms