RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 CRYGCP07315 174 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 HTR1AP08908 422 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 PSKH1P11801 424 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 SRMP19623 302 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 MAS1LP35410 378 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 EIF2B2P49770 351 aaKnown RBP2□□□□□ -2.09
SNHG1-202ENST00000535689 HCCSP53701 268 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 CDK5Q00535 292 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 MXD1Q05195 221 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 ZSCAN26Q16670 478 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 RTL8BQ17RB0 113 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 COX19Q49B96 90 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 CLEC19AQ6UXS0 136 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 LINC00173Q6ZV60 143 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 GID4Q8IVV7 300 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 CMTM1Q8IZ96 169 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 INO80EQ8NBZ0 244 aaPredicted RBP2□□□□□ -2.09
SNHG1-202ENST00000535689 ZNF436-AS1Q8NC38 126 aaPredicted RBP2□□□□□ -2.09
SNHG1-202ENST00000535689 VSTM2AQ8TAG5 236 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 CMTM5Q96DZ9 223 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 NARS2Q96I59 477 aaKnown RBP2□□□□□ -2.09
SNHG1-202ENST00000535689 ADTRPQ96IZ2 230 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 OR2A7Q96R45 310 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 HSD17B10Q99714 261 aaKnown RBP2□□□□□ -2.09
SNHG1-202ENST00000535689 MRPL20Q9BYC9 149 aaKnown RBP2□□□□□ -2.09
SNHG1-202ENST00000535689 TAF9BQ9HBM6 251 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 DAZ1Q9NQZ3 744 aaKnown RBP2□□□□□ -2.09
SNHG1-202ENST00000535689 FGFR1OP2Q9NVK5 253 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 ARMC1Q9NVT9 282 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 SAMHD1Q9Y3Z3 626 aaKnown RBP2□□□□□ -2.09
SNHG1-202ENST00000535689 HSPG2P98160 4391 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 TRAV2A0A0B4J234 112 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 IGKV1-9A0A0C4DH69 117 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 IGKV1-12A0A0C4DH73 117 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 LOC107986453A0A1B0GWG9 222 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 A0A1W2PPV4 95 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 C7orf66A4D0T2 115 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 H0YJW9 148 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 BOLA2-SMG1P6H3BVE0 249 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 FXYD1O00168 92 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 NDUFA4O00483 81 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 BPY2O14599 106 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 NUPL2O15504 423 aaKnown RBP1.99□□□□□ -2.09
SNHG1-202ENST00000535689 RBFOX2O43251 390 aaKnown RBP eCLIP1.99□□□□□ -2.09
SNHG1-202ENST00000535689 SLC22A5O76082 557 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 HPRT1P00492 218 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 IGKV1D-12P01611 117 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 MBP02144 154 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 STAG3L2P0CL84 134 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 SAA2P0DJI9 122 aaPredicted RBP1.99□□□□□ -2.09
SNHG1-202ENST00000535689 GPX4P36969 197 aaPredicted RBP1.99□□□□□ -2.09
SNHG1-202ENST00000535689 TALDO1P37837 337 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 BCAP31P51572 246 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 CRISP1P54107 249 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 RBM11P57052 281 aaKnown RBP1.99□□□□□ -2.09
SNHG1-202ENST00000535689 MAGOHP61326 146 aaKnown RBP1.99□□□□□ -2.09
SNHG1-202ENST00000535689 PPP3R1P63098 170 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 TNXAQ16473 311 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 AADACL4Q5VUY2 407 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 OR2T5Q6IEZ7 315 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 NEGR1Q7Z3B1 354 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 GAPTQ8N292 157 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 Q8NAQ8 132 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 OR10G2Q8NGC3 310 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 OR5D18Q8NGL1 313 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 OR8D4Q8NGM9 314 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 OR2T29Q8NH02 315 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 OR4K15Q8NH41 348 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 TNFAIP8L1Q8WVP5 186 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 ACOT12Q8WYK0 555 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 MRGPRFQ96AM1 343 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 ADAT3Q96EY9 351 aaPredicted RBP1.99□□□□□ -2.09
SNHG1-202ENST00000535689 TIMM17AQ99595 171 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 RSG1Q9BU20 258 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 ACTR3CQ9C0K3 210 aaPredicted RBP1.99□□□□□ -2.09
SNHG1-202ENST00000535689 MED4Q9NPJ6 270 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 CMTM6Q9NX76 183 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 TVP23BQ9NYZ1 205 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 ZNF230Q9UIE0 474 aaPredicted RBP1.99□□□□□ -2.09
SNHG1-202ENST00000535689 GNG8Q9UK08 70 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 PRELID3BQ9Y3B1 194 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 YTHDF2Q9Y5A9 579 aaKnown RBP1.99□□□□□ -2.09
SNHG1-202ENST00000535689 VPS13BQ7Z7G8 4022 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 FAT2Q9NYQ8 4349 aa1.99□□□□□ -2.09
SNHG1-202ENST00000535689 TRAV14DV4A0A0A6YYC5 116 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 TMEM213A2RRL7 107 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 TMEM212A6NML5 194 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 PPP5D1E7EU14 171 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 SMKR1H3BMG3 65 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 K7EP13 123 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 NME4O00746 187 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 TAAR5O14804 337 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 GEMIN2O14893 280 aaKnown RBP1.98□□□□□ -2.09
SNHG1-202ENST00000535689 DEFB4AO15263 64 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 SC5DO75845 299 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 DCTN3O75935 186 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 TRBV12-3P01733 135 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 HLA-DQA1P01909 254 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 SERPINE2P07093 398 aa1.98□□□□□ -2.09
SNHG1-202ENST00000535689 CTSDP07339 412 aaPredicted RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms