RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 NPIPB5A8MRT5 1133 aa13.83□□□□□ -0.2
USH1C-205ENST00000527020 F8W735 103 aaPredicted RBP13.83□□□□□ -0.2
USH1C-205ENST00000527020 MRPS12O15235 138 aaKnown RBP13.83□□□□□ -0.2
USH1C-205ENST00000527020 CT83Q5H943 113 aa13.83□□□□□ -0.2
USH1C-205ENST00000527020 ZNF562Q6V9R5 426 aa13.83□□□□□ -0.2
USH1C-205ENST00000527020 ATP5L2Q7Z4Y8 100 aa13.83□□□□□ -0.2
USH1C-205ENST00000527020 KIR3DL3Q8N743 410 aa13.83□□□□□ -0.2
USH1C-205ENST00000527020 RNF125Q96EQ8 232 aa13.83□□□□□ -0.2
USH1C-205ENST00000527020 SSBP4Q9BWG4 385 aaPredicted RBP13.83□□□□□ -0.2
USH1C-205ENST00000527020 NRN1Q9NPD7 142 aa13.83□□□□□ -0.2
USH1C-205ENST00000527020 ZNF785A8K8V0 405 aa13.82□□□□□ -0.2
USH1C-205ENST00000527020 OR2J3O76001 311 aa13.82□□□□□ -0.2
USH1C-205ENST00000527020 TOX4O94842 621 aa13.82□□□□□ -0.2
USH1C-205ENST00000527020 AMTP48728 403 aa13.82□□□□□ -0.2
USH1C-205ENST00000527020 GOLT1AQ6ZVE7 132 aa13.82□□□□□ -0.2
USH1C-205ENST00000527020 CHD8Q9HCK8 2581 aa13.82□□□□□ -0.2
USH1C-205ENST00000527020 ZNF324O75467 553 aaPredicted RBP13.82□□□□□ -0.2
USH1C-205ENST00000527020 P01737 135 aa13.82□□□□□ -0.2
USH1C-205ENST00000527020 IL4P05112 153 aa13.82□□□□□ -0.2
USH1C-205ENST00000527020 LY6DQ14210 128 aa13.82□□□□□ -0.2
USH1C-205ENST00000527020 EBI3Q14213 229 aa13.82□□□□□ -0.2
USH1C-205ENST00000527020 CIARTQ8N365 385 aaPredicted RBP13.82□□□□□ -0.2
USH1C-205ENST00000527020 ARPC1AQ92747 370 aa13.82□□□□□ -0.2
USH1C-205ENST00000527020 NCOR2Q9Y618 2525 aa13.81□□□□□ -0.2
USH1C-205ENST00000527020 NPIPB6E9PJ23 425 aa13.81□□□□□ -0.2
USH1C-205ENST00000527020 PMCHP20382 165 aa13.81□□□□□ -0.2
USH1C-205ENST00000527020 CAMPP49913 170 aa13.81□□□□□ -0.2
USH1C-205ENST00000527020 SIGLEC15Q6ZMC9 328 aa13.81□□□□□ -0.2
USH1C-205ENST00000527020 NIT1Q86X76 327 aa13.81□□□□□ -0.2
USH1C-205ENST00000527020 BPIFA4PQ86YQ2 179 aa13.81□□□□□ -0.2
USH1C-205ENST00000527020 VN1R17PQ8TDU5 208 aa13.81□□□□□ -0.2
USH1C-205ENST00000527020 SIRPDQ9H106 197 aa13.81□□□□□ -0.2
USH1C-205ENST00000527020 MED13LQ71F56 2210 aa13.81□□□□□ -0.2
USH1C-205ENST00000527020 A0A1B0GV90 55 aa13.81□□□□□ -0.2
USH1C-205ENST00000527020 A8MWL6 223 aa13.81□□□□□ -0.2
USH1C-205ENST00000527020 HLA-DRB1P01911 266 aa13.81□□□□□ -0.2
USH1C-205ENST00000527020 KLF5Q13887 457 aaPredicted RBP13.81□□□□□ -0.2
USH1C-205ENST00000527020 PRR31Q5SQ13 230 aa13.81□□□□□ -0.2
USH1C-205ENST00000527020 CCDC144NLQ6NUI1 221 aa13.81□□□□□ -0.2
USH1C-205ENST00000527020 TTC9CQ8N5M4 171 aa13.81□□□□□ -0.2
USH1C-205ENST00000527020 LINC00469Q8N7U9 141 aa13.81□□□□□ -0.2
USH1C-205ENST00000527020 ALKBH7Q9BT30 221 aaPredicted RBP13.81□□□□□ -0.2
USH1C-205ENST00000527020 TRBV6-1A0A0K0K1D8 114 aa13.8□□□□□ -0.2
USH1C-205ENST00000527020 NCBP2LA6PVI3 153 aaKnown RBP13.8□□□□□ -0.2
USH1C-205ENST00000527020 OOSP1A8MZH6 123 aa13.8□□□□□ -0.2
USH1C-205ENST00000527020 PRNTQ86SH4 94 aa13.8□□□□□ -0.2
USH1C-205ENST00000527020 ZNF48Q96MX3 618 aaPredicted RBP13.8□□□□□ -0.2
USH1C-205ENST00000527020 C2orf88Q9BSF0 95 aa13.8□□□□□ -0.2
USH1C-205ENST00000527020 GNG7O60262 68 aa13.79□□□□□ -0.2
USH1C-205ENST00000527020 MINOS1Q5TGZ0 78 aa13.79□□□□□ -0.2
USH1C-205ENST00000527020 C16orf54Q6UWD8 224 aa13.79□□□□□ -0.2
USH1C-205ENST00000527020 FAM19A2Q8N3H0 131 aa13.79□□□□□ -0.2
USH1C-205ENST00000527020 MINOS1-NBL1R4GNA1 71 aa13.79□□□□□ -0.2
USH1C-205ENST00000527020 OVOL3O00110 214 aa13.79□□□□□ -0.2
USH1C-205ENST00000527020 EREGO14944 169 aa13.79□□□□□ -0.2
USH1C-205ENST00000527020 EGR2P11161 476 aaPredicted RBP13.79□□□□□ -0.2
USH1C-205ENST00000527020 FCGR2BP31994 310 aaPredicted RBP13.79□□□□□ -0.2
USH1C-205ENST00000527020 KRTDAPP60985 99 aa13.79□□□□□ -0.2
USH1C-205ENST00000527020 OR4F17Q8NGA8 305 aa13.79□□□□□ -0.2
USH1C-205ENST00000527020 ZNF414Q96IQ9 312 aa13.79□□□□□ -0.2
USH1C-205ENST00000527020 PGLYRP4Q96LB8 373 aa13.79□□□□□ -0.2
USH1C-205ENST00000527020 SVEP1Q4LDE5 3571 aa13.78□□□□□ -0.2
USH1C-205ENST00000527020 TRAV30A0A087WSZ9 112 aa13.78□□□□□ -0.2
USH1C-205ENST00000527020 PRB4P10163 310 aaPredicted RBP13.78□□□□□ -0.2
USH1C-205ENST00000527020 MFAP4P55083 255 aa13.78□□□□□ -0.2
USH1C-205ENST00000527020 HBBP68871 147 aa13.78□□□□□ -0.2
USH1C-205ENST00000527020 AJUBAQ96IF1 538 aa13.78□□□□□ -0.2
USH1C-205ENST00000527020 C20orf144Q9BQM9 153 aa13.78□□□□□ -0.2
USH1C-205ENST00000527020 GFRA4Q9GZZ7 299 aa13.78□□□□□ -0.2
USH1C-205ENST00000527020 NDUFB8O95169 186 aa13.78□□□□□ -0.2
USH1C-205ENST00000527020 TMEM75Q8N9X5 138 aa13.78□□□□□ -0.2
USH1C-205ENST00000527020 OR2D3Q8NGH3 330 aa13.78□□□□□ -0.2
USH1C-205ENST00000527020 DAZAP1Q96EP5 407 aaKnown RBP13.78□□□□□ -0.2
USH1C-205ENST00000527020 ASCL2Q99929 193 aa13.78□□□□□ -0.2
USH1C-205ENST00000527020 RNF24Q9Y225 148 aa13.78□□□□□ -0.2
USH1C-205ENST00000527020 LBHQ53QV2 105 aaPredicted RBP13.77□□□□□ -0.21
USH1C-205ENST00000527020 RBPMS2Q6ZRY4 209 aaKnown RBP13.77□□□□□ -0.21
USH1C-205ENST00000527020 LYPD1Q8N2G4 141 aa13.77□□□□□ -0.21
USH1C-205ENST00000527020 ZC2HC1AQ96GY0 325 aa13.77□□□□□ -0.21
USH1C-205ENST00000527020 UBTD1Q9HAC8 227 aa13.77□□□□□ -0.21
USH1C-205ENST00000527020 IGHV7-81A0A0B4J1V7 117 aa13.76□□□□□ -0.21
USH1C-205ENST00000527020 DIRC3C9JPN6 131 aa13.76□□□□□ -0.21
USH1C-205ENST00000527020 TMEM11P17152 192 aa13.76□□□□□ -0.21
USH1C-205ENST00000527020 COL8A1P27658 744 aa13.76□□□□□ -0.21
USH1C-205ENST00000527020 C21orf62Q9NYP8 219 aa13.76□□□□□ -0.21
USH1C-205ENST00000527020 SOX21Q9Y651 276 aaPredicted RBP13.76□□□□□ -0.21
USH1C-205ENST00000527020 FAM231BA6NCW3 169 aa13.76□□□□□ -0.21
USH1C-205ENST00000527020 IGHV3-23P01764 117 aa13.76□□□□□ -0.21
USH1C-205ENST00000527020 C3orf79P0CE67 100 aa13.76□□□□□ -0.21
USH1C-205ENST00000527020 Q8N9W7 124 aa13.76□□□□□ -0.21
USH1C-205ENST00000527020 TMEM190Q8WZ59 177 aa13.76□□□□□ -0.21
USH1C-205ENST00000527020 SNHG12Q9BXW3 62 aa13.76□□□□□ -0.21
USH1C-205ENST00000527020 PAM16Q9Y3D7 125 aa13.76□□□□□ -0.21
USH1C-205ENST00000527020 IGHV2-70DA0A0C4DH43 119 aa13.75□□□□□ -0.21
USH1C-205ENST00000527020 M0R3E3 92 aa13.75□□□□□ -0.21
USH1C-205ENST00000527020 APOHP02749 345 aaPredicted RBP13.75□□□□□ -0.21
USH1C-205ENST00000527020 Q56UQ5 140 aa13.75□□□□□ -0.21
USH1C-205ENST00000527020 FAM120AOSQ5T036 256 aa13.75□□□□□ -0.21
USH1C-205ENST00000527020 OR4B1Q8NGF8 309 aa13.75□□□□□ -0.21
USH1C-205ENST00000527020 URB1-AS1Q96HZ7 61 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms