RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 MED12LQ86YW9 2145 aa2.44□□□□□ -2.02
CD44-217ENST00000525348 SCN2AQ99250 2005 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 A0A1W2PPM0 123 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 MEIS3P1A6NDR6 274 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 OOSP1A8MZH6 123 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 FCN1O00602 326 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 HCRTO43612 131 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 GSTZ1O43708 216 aaPredicted RBP2.43□□□□□ -2.02
CD44-217ENST00000525348 CREBL2O60519 120 aaPredicted RBP2.43□□□□□ -2.02
CD44-217ENST00000525348 ZNF737O75373 536 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 LSM8O95777 96 aaKnown RBP2.43□□□□□ -2.02
CD44-217ENST00000525348 NAPSAO96009 420 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 CA2P00918 260 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 C1QAP02745 245 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 CECR9P0C854 216 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 CCL5P13501 91 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 VDAC1P21796 283 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 CCL1P22362 96 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 ATP5G3P48201 142 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 MARCKSL1P49006 195 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 GFERP55789 205 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 PPP1CAP62136 330 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 PLGLB1Q02325 96 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 ADIRFQ15847 76 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 MPV17LQ2QL34 196 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 C12orf74Q32Q52 190 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 VAX1Q5SQQ9 334 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 FAM120AOSQ5T036 256 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 AMTNQ6UX39 209 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 Q6ZRU5 148 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 COMMD6Q7Z4G1 85 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 PCP2Q8IVA1 136 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 DCAF4L2Q8NA75 395 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 OR10AG1Q8NH19 301 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 S100A16Q96FQ6 103 aaKnown RBP2.43□□□□□ -2.02
CD44-217ENST00000525348 FAM19A4Q96LR4 140 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 PRELID3AQ96N28 172 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 RARRES2Q99969 163 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 EMC6Q9BV81 110 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 ULBP3Q9BZM4 244 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 PBOV1Q9GZY1 135 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 TMEM191AQ9H0A3 160 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 RERGLQ9H628 205 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 SPRR3Q9UBC9 169 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 TRMT112Q9UI30 125 aaKnown RBP2.43□□□□□ -2.02
CD44-217ENST00000525348 KLK5Q9Y337 293 aaPredicted RBP2.43□□□□□ -2.02
CD44-217ENST00000525348 WASHC3Q9Y3C0 194 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 SPCS1Q9Y6A9 102 aa2.43□□□□□ -2.02
CD44-217ENST00000525348 HEATR5AQ86XA9 2040 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 SPTBN5Q9NRC6 3674 aaKnown RBP2.42□□□□□ -2.02
CD44-217ENST00000525348 EXPH5Q8NEV8 1989 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 TRBV6-7A0A0A0MS04 114 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 A0A0J9YW62 118 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 A0A0U1RQV1 116 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 LOC285095A0A1B0GVY8 99 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 TRDV1A0A1B0GX56 115 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 GRIFINA4D1Z8 144 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 NAP1L6A6NFF2 107 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 BBIP1A8MTZ0 92 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 C8orf87E5RJ46 101 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 H3BUT2 72 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 M0R2P5 195 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 PITX3O75364 302 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 DPM2O94777 84 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 NDUFC2O95298 119 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 NCR2O95944 276 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 P01737 135 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 ATP5G1P05496 136 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 CD55P08174 381 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 OR5AL1P0C617 328 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 PPIBP23284 216 aaKnown RBP2.42□□□□□ -2.02
CD44-217ENST00000525348 OSTNP61366 133 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 SP4Q02446 784 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 RPL18AQ02543 176 aaKnown RBP2.42□□□□□ -2.02
CD44-217ENST00000525348 IL15RAQ13261 267 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 LINC00303Q3SY05 128 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 TTC32Q5I0X7 151 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 KLF17Q5JT82 389 aaPredicted RBP2.42□□□□□ -2.02
CD44-217ENST00000525348 ZCCHC23Q6ZST2 131 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 DAZ4Q86SG3 579 aaKnown RBP2.42□□□□□ -2.02
CD44-217ENST00000525348 RPS19BP1Q86WX3 136 aaKnown RBP2.42□□□□□ -2.02
CD44-217ENST00000525348 ZNF101Q8IZC7 436 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 LINC00311Q8N616 119 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 NUP35Q8NFH5 326 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 OR10J6PQ8NGY7 276 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 LMX1AQ8TE12 382 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 C2orf15Q8WU43 125 aaKnown RBP2.42□□□□□ -2.02
CD44-217ENST00000525348 FGF11Q92914 225 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 GNPNAT1Q96EK6 184 aaPredicted RBP2.42□□□□□ -2.02
CD44-217ENST00000525348 TVP23CQ96ET8 276 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 IGF2BP2-AS1Q96M15 143 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 COMMD5Q9GZQ3 224 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 ZNF442Q9H7R0 627 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 REEP1Q9H902 201 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 DAZ1Q9NQZ3 744 aaKnown RBP2.42□□□□□ -2.02
CD44-217ENST00000525348 RBM12B-AS1Q9P1G2 102 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 ZNF257Q9Y2Q1 563 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 KLF13Q9Y2Y9 288 aaPredicted RBP2.42□□□□□ -2.02
CD44-217ENST00000525348 COQ4Q9Y3A0 265 aa2.42□□□□□ -2.02
CD44-217ENST00000525348 NEUROG3Q9Y4Z2 214 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms