RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 PXMP4Q9Y6I8 212 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 H0YIZ8 118 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 ISLRO14498 428 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 SPP1P10451 314 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 CXCL3P19876 107 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 RPL29P47914 159 aaKnown RBP4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 ZNF266Q14584 549 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 OPCMLQ14982 345 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 TMEM41BQ5BJD5 291 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 ACTL10Q5JWF8 245 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 SPATA31B1PQ5VZV4 182 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 MIC13Q5XKP0 118 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 EBLN2Q6P2I7 272 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 MORN3Q6PF18 240 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 Q6ZWC4 215 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 LINC00305Q7Z4B0 112 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 BPIFA4PQ86YQ2 179 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 OR11H7Q8NGC8 314 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 DCANP1Q8TF63 244 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 WWC2-AS2Q96NR7 200 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 UHRF2Q96PU4 802 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 RSG1Q9BU20 258 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 NPCDR1Q9BY65 106 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 DNAJC4Q9NNZ3 241 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 RPRMQ9NS64 109 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 SLC39A9Q9NUM3 307 aa4.01□□□□□ -1.77
HMGB1P40-201ENST00000525121 FXYD6-FXYD2A0A087WZ82 144 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 BORCS7-ASMTA0A0B4J1R7 106 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 SPRY2O43597 315 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 CA1P00915 261 aaPredicted RBP4□□□□□ -1.77
HMGB1P40-201ENST00000525121 LYL1P12980 280 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 CXCL2P19875 107 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 PRR20EP86478 221 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 PRR20CP86479 221 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 PRR20DP86480 221 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 PRR20BP86481 221 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 PRR20AP86496 221 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 GUK1Q16774 197 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 DEFB135Q30KP9 77 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 LCN15Q6UWW0 184 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 LINC00322Q6ZN03 302 aaPredicted RBP4□□□□□ -1.77
HMGB1P40-201ENST00000525121 TMEM182Q6ZP80 229 aaPredicted RBP4□□□□□ -1.77
HMGB1P40-201ENST00000525121 FAM24BQ8N5W8 94 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 ZNF738Q8NE65 137 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 OR2T35Q8NGX2 323 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 GATAD1Q8WUU5 269 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 CHAC2Q8WUX2 184 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 CITED4Q96RK1 184 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 SLC50A1Q9BRV3 221 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 RNF126Q9BV68 326 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 C1QTNF4Q9BXJ3 329 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 SMIM3Q9BZL3 60 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 WDR61Q9GZS3 305 aaKnown RBP4□□□□□ -1.77
HMGB1P40-201ENST00000525121 CSTL1Q9H114 145 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 TP53TG1Q9Y2A0 90 aa4□□□□□ -1.77
HMGB1P40-201ENST00000525121 A0A087X0K7 114 aa3.99□□□□□ -1.77
HMGB1P40-201ENST00000525121 KNCNA6PVL3 124 aa3.99□□□□□ -1.77
HMGB1P40-201ENST00000525121 DUSP14O95147 198 aaKnown RBP3.99□□□□□ -1.77
HMGB1P40-201ENST00000525121 TAS2R45P59539 299 aa3.99□□□□□ -1.77
HMGB1P40-201ENST00000525121 ZNF124Q15973 351 aa3.99□□□□□ -1.77
HMGB1P40-201ENST00000525121 FFAR4Q5NUL3 377 aa3.99□□□□□ -1.77
HMGB1P40-201ENST00000525121 FAM78BQ5VT40 261 aa3.99□□□□□ -1.77
HMGB1P40-201ENST00000525121 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.99□□□□□ -1.77
HMGB1P40-201ENST00000525121 FOXI2Q6ZQN5 318 aa3.99□□□□□ -1.77
HMGB1P40-201ENST00000525121 TRPT1Q86TN4 253 aaKnown RBP3.99□□□□□ -1.77
HMGB1P40-201ENST00000525121 OR4B1Q8NGF8 309 aa3.99□□□□□ -1.77
HMGB1P40-201ENST00000525121 IL17DQ8TAD2 202 aa3.99□□□□□ -1.77
HMGB1P40-201ENST00000525121 AQP10Q96PS8 301 aa3.99□□□□□ -1.77
HMGB1P40-201ENST00000525121 MRPL32Q9BYC8 188 aaKnown RBP3.99□□□□□ -1.77
HMGB1P40-201ENST00000525121 PARD6GQ9BYG4 376 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P40-201ENST00000525121 SAV1Q9H4B6 383 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P40-201ENST00000525121 RETNQ9HD89 108 aa3.99□□□□□ -1.77
HMGB1P40-201ENST00000525121 PPP1R14DQ9NXH3 145 aa3.99□□□□□ -1.77
HMGB1P40-201ENST00000525121 CLEC5AQ9NY25 188 aa3.99□□□□□ -1.77
HMGB1P40-201ENST00000525121 SORL1Q92673 2214 aa3.98□□□□□ -1.77
HMGB1P40-201ENST00000525121 A0A1W2PPV4 95 aa3.98□□□□□ -1.77
HMGB1P40-201ENST00000525121 SOCS3O14543 225 aa3.98□□□□□ -1.77
HMGB1P40-201ENST00000525121 OR7C2O60412 319 aa3.98□□□□□ -1.77
HMGB1P40-201ENST00000525121 IGKV3-20P01619 116 aa3.98□□□□□ -1.77
HMGB1P40-201ENST00000525121 HLA-DRB4P13762 266 aa3.98□□□□□ -1.77
HMGB1P40-201ENST00000525121 RHOBP62745 196 aa3.98□□□□□ -1.77
HMGB1P40-201ENST00000525121 ACOT6Q3I5F7 207 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P40-201ENST00000525121 KHDC3LQ587J8 217 aa3.98□□□□□ -1.77
HMGB1P40-201ENST00000525121 PATE2Q6UY27 113 aa3.98□□□□□ -1.77
HMGB1P40-201ENST00000525121 OR10J6PQ8NGY7 276 aa3.98□□□□□ -1.77
HMGB1P40-201ENST00000525121 TMEM37Q8WXS4 190 aa3.98□□□□□ -1.77
HMGB1P40-201ENST00000525121 RNF183Q96D59 192 aa3.98□□□□□ -1.77
HMGB1P40-201ENST00000525121 GNPNAT1Q96EK6 184 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P40-201ENST00000525121 HRH4Q9H3N8 390 aa3.98□□□□□ -1.77
HMGB1P40-201ENST00000525121 AAMDCQ9H7C9 122 aa3.98□□□□□ -1.77
HMGB1P40-201ENST00000525121 TMEM14CQ9P0S9 112 aa3.98□□□□□ -1.77
HMGB1P40-201ENST00000525121 TIMM9Q9Y5J7 89 aa3.98□□□□□ -1.77
HMGB1P40-201ENST00000525121 HLA-DRB4X5D2U9 266 aa3.98□□□□□ -1.77
HMGB1P40-201ENST00000525121 A0A0J9YX75 114 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 H3BMM0 161 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 TAAR5O14804 337 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 ARPC5O15511 151 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 ZNF253O75346 499 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 MBP02144 154 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 AMBPP02760 352 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms