RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 IGHV1-69P01742 117 aa3.14□□□□□ -1.91
NPM1-212ENST00000524204 ZNF286BP0CG31 522 aa3.14□□□□□ -1.91
NPM1-212ENST00000524204 CMPK1P30085 196 aa3.14□□□□□ -1.91
NPM1-212ENST00000524204 CA5AP35218 305 aa3.14□□□□□ -1.91
NPM1-212ENST00000524204 YPEL3P61236 119 aaPredicted RBP3.14□□□□□ -1.91
NPM1-212ENST00000524204 MEF2BQ02080 365 aaPredicted RBP3.14□□□□□ -1.91
NPM1-212ENST00000524204 RPL18Q07020 188 aaKnown RBP3.14□□□□□ -1.91
NPM1-212ENST00000524204 ZNF816Q0VGE8 651 aaPredicted RBP3.14□□□□□ -1.91
NPM1-212ENST00000524204 RRN3P1Q2M238 152 aa3.14□□□□□ -1.91
NPM1-212ENST00000524204 ZFP2Q6ZN57 461 aa3.14□□□□□ -1.91
NPM1-212ENST00000524204 C16orf47Q6ZP98 133 aaPredicted RBP3.14□□□□□ -1.91
NPM1-212ENST00000524204 TRAPPC6BQ86SZ2 158 aa3.14□□□□□ -1.91
NPM1-212ENST00000524204 SAXO1Q8IYX7 474 aa3.14□□□□□ -1.91
NPM1-212ENST00000524204 C10orf126Q8N4M7 172 aa3.14□□□□□ -1.91
NPM1-212ENST00000524204 TM2D3Q9BRN9 247 aa3.14□□□□□ -1.91
NPM1-212ENST00000524204 MED31Q9Y3C7 131 aa3.14□□□□□ -1.91
NPM1-212ENST00000524204 MAST4O15021 2626 aa3.14□□□□□ -1.91
NPM1-212ENST00000524204 NUP214P35658 2090 aaPredicted RBP3.13□□□□□ -1.91
NPM1-212ENST00000524204 CEP295Q9C0D2 2601 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 SETXQ7Z333 2677 aaKnown RBP3.13□□□□□ -1.91
NPM1-212ENST00000524204 ARHGAP21Q5T5U3 1957 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 IGKV1D-43A0A0B4J1Z2 117 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 IRGMA1A4Y4 181 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 C17orf51A8MQB3 221 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 FABP5P3A8MUU1 101 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 C5orf58C9J3I9 102 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 TXNDC9O14530 226 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 UBFD1O14562 309 aaKnown RBP3.13□□□□□ -1.91
NPM1-212ENST00000524204 TAX1BP3O14907 124 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 LEPROTO15243 131 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 LY6HO94772 140 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 C1QAP02745 245 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 UBBP0CG47 229 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 DNAH10OSP0CZ25 163 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 CCL3P10147 92 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 ZNF19P17023 458 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 RPS3P23396 243 aaKnown RBP eCLIP3.13□□□□□ -1.913e-11■■■□□ 16.3
NPM1-212ENST00000524204 NFYBP25208 207 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 SRIP30626 198 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 S100A11P31949 105 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 SRP14P37108 136 aaKnown RBP3.13□□□□□ -1.91
NPM1-212ENST00000524204 RBM11P57052 281 aaKnown RBP3.13□□□□□ -1.91
NPM1-212ENST00000524204 NDPQ00604 133 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 RTL8BQ17RB0 113 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 LGALSLQ3ZCW2 172 aaPredicted RBP3.13□□□□□ -1.91
NPM1-212ENST00000524204 LDLRAD2Q5SZI1 272 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 ZNF767PQ75MW2 155 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 OR8I2Q8N0Y5 310 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 LRRC18Q8N456 261 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 CNEP1R1Q8N9A8 125 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 TMEM229BQ8NBD8 167 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 OR5C1Q8NGR4 320 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 BORCS8Q96FH0 119 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 UPK3BQ9BT76 320 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 CACYBPQ9HB71 228 aaKnown RBP3.13□□□□□ -1.91
NPM1-212ENST00000524204 TP73-AS1Q9UF72 201 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 TRAPPC2LQ9UL33 140 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 FOCADQ5VW36 1801 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 CNOT1A5YKK6 2376 aaKnown RBP3.13□□□□□ -1.91
NPM1-212ENST00000524204 PTPRSQ13332 1948 aa3.13□□□□□ -1.91
NPM1-212ENST00000524204 PARP14Q460N5 1801 aa3.12□□□□□ -1.91
NPM1-212ENST00000524204 IGKV1OR2-108A0A075B7D4 117 aa3.12□□□□□ -1.91
NPM1-212ENST00000524204 TLCD2A6NGC4 264 aa3.12□□□□□ -1.91
NPM1-212ENST00000524204 TPST1O60507 370 aa3.12□□□□□ -1.91
NPM1-212ENST00000524204 GGCTO75223 188 aaKnown RBP3.12□□□□□ -1.91
NPM1-212ENST00000524204 CDS2O95674 445 aa3.12□□□□□ -1.91
NPM1-212ENST00000524204 NPYP01303 97 aa3.12□□□□□ -1.91
NPM1-212ENST00000524204 TRGC2P03986 189 aa3.12□□□□□ -1.91
NPM1-212ENST00000524204 ZNF80P51504 273 aaPredicted RBP3.12□□□□□ -1.91
NPM1-212ENST00000524204 EIF5AP63241 154 aaKnown RBP3.12□□□□□ -1.91
NPM1-212ENST00000524204 PSG9Q00887 426 aa3.12□□□□□ -1.91
NPM1-212ENST00000524204 PLCXD2Q0VAA5 305 aa3.12□□□□□ -1.91
NPM1-212ENST00000524204 SDIM1Q6ZPB5 146 aa3.12□□□□□ -1.91
NPM1-212ENST00000524204 LINC00612Q8N6U2 182 aa3.12□□□□□ -1.91
NPM1-212ENST00000524204 ST20-AS1Q8NBB2 130 aa3.12□□□□□ -1.91
NPM1-212ENST00000524204 OR51T1Q8NGJ9 327 aa3.12□□□□□ -1.91
NPM1-212ENST00000524204 PPTC7Q8NI37 304 aa3.12□□□□□ -1.91
NPM1-212ENST00000524204 CANT1Q8WVQ1 401 aa3.12□□□□□ -1.91
NPM1-212ENST00000524204 C1orf54Q8WWF1 131 aa3.12□□□□□ -1.91
NPM1-212ENST00000524204 GPX7Q96SL4 187 aaPredicted RBP3.12□□□□□ -1.91
NPM1-212ENST00000524204 AICDAQ9GZX7 198 aa3.12□□□□□ -1.91
NPM1-212ENST00000524204 SMDT1Q9H4I9 107 aa3.12□□□□□ -1.91
NPM1-212ENST00000524204 PRRC2AP48634 2157 aaKnown RBP3.12□□□□□ -1.91
NPM1-212ENST00000524204 HELZ2Q9BYK8 2649 aaKnown RBP3.12□□□□□ -1.91
NPM1-212ENST00000524204 NLRC5Q86WI3 1866 aa3.11□□□□□ -1.91
NPM1-212ENST00000524204 CDK5RAP2Q96SN8 1893 aa3.11□□□□□ -1.91
NPM1-212ENST00000524204 COL4A4P53420 1690 aaPredicted RBP3.11□□□□□ -1.91
NPM1-212ENST00000524204 NAV2Q8IVL1 2488 aa3.11□□□□□ -1.91
NPM1-212ENST00000524204 IGHV3-73A0A0B4J1V6 119 aa3.11□□□□□ -1.91
NPM1-212ENST00000524204 TRDV1A0A1B0GX56 115 aa3.11□□□□□ -1.91
NPM1-212ENST00000524204 C7orf66A4D0T2 115 aa3.11□□□□□ -1.91
NPM1-212ENST00000524204 A8MUU9 505 aa3.11□□□□□ -1.91
NPM1-212ENST00000524204 H3BQ85 93 aa3.11□□□□□ -1.91
NPM1-212ENST00000524204 PANO1I0J062 215 aa3.11□□□□□ -1.91
NPM1-212ENST00000524204 K7EP13 123 aa3.11□□□□□ -1.91
NPM1-212ENST00000524204 IGHV3-53P01767 116 aa3.11□□□□□ -1.91
NPM1-212ENST00000524204 APOC1P02654 83 aa3.11□□□□□ -1.91
NPM1-212ENST00000524204 MPC1LP0DKB6 136 aa3.11□□□□□ -1.91
NPM1-212ENST00000524204 BIKQ13323 160 aa3.11□□□□□ -1.91
NPM1-212ENST00000524204 NDUFA5Q16718 116 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms