RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 FAM201AQ5SY85 155 aa6.06□□□□□ -1.44
HDAC3-216ENST00000523088 LYRM7Q5U5X0 104 aa6.06□□□□□ -1.44
HDAC3-216ENST00000523088 FAM90A2PQ658T7 463 aa6.06□□□□□ -1.44
HDAC3-216ENST00000523088 NOXRED1Q6NXP6 359 aa6.06□□□□□ -1.44
HDAC3-216ENST00000523088 LHFPL1Q86WI0 220 aa6.06□□□□□ -1.44
HDAC3-216ENST00000523088 HOGA1Q86XE5 327 aa6.06□□□□□ -1.44
HDAC3-216ENST00000523088 SGPP2Q8IWX5 399 aa6.06□□□□□ -1.44
HDAC3-216ENST00000523088 RPRMLQ8N4K4 120 aa6.06□□□□□ -1.44
HDAC3-216ENST00000523088 OR10AC1Q8NH08 325 aa6.06□□□□□ -1.44
HDAC3-216ENST00000523088 RNF128Q8TEB7 428 aa6.06□□□□□ -1.44
HDAC3-216ENST00000523088 IGFBPL1Q8WX77 278 aa6.06□□□□□ -1.44
HDAC3-216ENST00000523088 LSM10Q969L4 123 aaKnown RBP6.06□□□□□ -1.44
HDAC3-216ENST00000523088 FOXB1Q99853 325 aa6.06□□□□□ -1.44
HDAC3-216ENST00000523088 FOXC2Q99958 501 aa6.06□□□□□ -1.44
HDAC3-216ENST00000523088 IKZF5Q9H5V7 419 aa6.06□□□□□ -1.44
HDAC3-216ENST00000523088 KCNIP2Q9NS61 270 aa6.06□□□□□ -1.44
HDAC3-216ENST00000523088 KLHDC2Q9Y2U9 406 aa6.06□□□□□ -1.44
HDAC3-216ENST00000523088 POLQO75417 2590 aa6.06□□□□□ -1.44
HDAC3-216ENST00000523088 TRAV26-2A0A0B4J265 109 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 EPM2AB3EWF7 344 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 K7N7A8 449 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 ZNHIT1O43257 154 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 TNFSF12O43508 249 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 NUPR1O60356 82 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 HLA-DMBP28068 263 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 SFTPDP35247 375 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 PTGDSP41222 190 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 TAS2R45P59539 299 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 FAM27E3Q08E93 113 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 FUT5Q11128 374 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 IL15RAQ13261 267 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 WFDC2Q14508 124 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 ICAM4Q14773 271 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 KIR3DS1Q14943 382 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 DAZAP2Q15038 168 aaPredicted RBP6.05□□□□□ -1.44
HDAC3-216ENST00000523088 ETDBQ3ZM63 59 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 NMSQ5H8A3 153 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 Q6ZRU5 148 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 CYP2G1PQ6ZSU1 146 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 RPS27LQ71UM5 84 aaKnown RBP6.05□□□□□ -1.44
HDAC3-216ENST00000523088 NR2C2APQ86WQ0 139 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 BPIFA4PQ86YQ2 179 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 TMEM255BQ8WV15 326 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 SCRT2Q9NQ03 307 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 CISD1Q9NZ45 108 aaKnown RBP6.05□□□□□ -1.44
HDAC3-216ENST00000523088 PRO0461Q9UI25 63 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 DNAJC15Q9Y5T4 150 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 MED12Q93074 2177 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 AKAP9Q99996 3911 aa6.05□□□□□ -1.44
HDAC3-216ENST00000523088 CELSR1Q9NYQ6 3014 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 AKAP6Q13023 2319 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 NUP214P35658 2090 aaPredicted RBP6.04□□□□□ -1.44
HDAC3-216ENST00000523088 TRBV20-1A0A075B6N2 111 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 IGLV3-32A0A0A0MS00 114 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 A0A0G2JK05 382 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 C5orf63A6NC05 138 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 ZNF736B4DX44 427 aaPredicted RBP6.04□□□□□ -1.44
HDAC3-216ENST00000523088 H3BS24 57 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 H7C1H1 209 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 EFNA2O43921 213 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 SERF1AO75920 110 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 IGHV3-7P01780 117 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 ADMP35318 185 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 ZNF136P52737 540 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 CAV3P56539 151 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 KLF5Q13887 457 aaPredicted RBP6.04□□□□□ -1.44
HDAC3-216ENST00000523088 MRPL2Q5T653 305 aaKnown RBP6.04□□□□□ -1.44
HDAC3-216ENST00000523088 RPL7L1Q6DKI1 246 aaKnown RBP6.04□□□□□ -1.44
HDAC3-216ENST00000523088 BAGE3Q86Y29 109 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 BAGE2Q86Y30 109 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 CIARTQ8N365 385 aaPredicted RBP6.04□□□□□ -1.44
HDAC3-216ENST00000523088 TMEM99Q8N816 258 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 OR8B3Q8NGG8 313 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 OR10G8Q8NGN5 311 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 COPS9Q8WXC6 57 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 SLC25A38Q96DW6 304 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 KCNS1Q96KK3 526 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 OR8B2Q96RD0 313 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 GLIPR2Q9H4G4 154 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 CACNG5Q9UF02 275 aa6.04□□□□□ -1.44
HDAC3-216ENST00000523088 PRRC2AP48634 2157 aaKnown RBP6.04□□□□□ -1.44
HDAC3-216ENST00000523088 TRAV18A0A075B6X5 111 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 FAM236AA0A1B0GUQ0 79 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 FAM236BA0A1B0GV22 79 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 A0A1W2PQD3 144 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 E9PLD3 99 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 C11orf98E9PRG8 122 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 ZNF324O75467 553 aaPredicted RBP6.03□□□□□ -1.44
HDAC3-216ENST00000523088 DEDDO75618 318 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 PPP1R3DO95685 299 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 TRACP01848 142 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 IGHA1P01876 353 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 ELANEP08246 267 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 COX8AP10176 69 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 PPP1CCP36873 323 aaKnown RBP6.03□□□□□ -1.44
HDAC3-216ENST00000523088 HMGA2P52926 109 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 LINC00310P59036 64 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 RPL38P63173 70 aaKnown RBP6.03□□□□□ -1.44
HDAC3-216ENST00000523088 RPL18AQ02543 176 aaKnown RBP6.03□□□□□ -1.44
HDAC3-216ENST00000523088 VMA21Q3ZAQ7 101 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms