RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 TCTE3Q8IZS6 198 aa13.49□□□□□ -0.25
VEGFA-222ENST00000520948 PPP1R14BQ96C90 147 aa13.49□□□□□ -0.25
VEGFA-222ENST00000520948 CITED4Q96RK1 184 aa13.49□□□□□ -0.25
VEGFA-222ENST00000520948 SCRT1Q9BWW7 348 aa13.49□□□□□ -0.25
VEGFA-222ENST00000520948 EPPK1P58107 5090 aaKnown RBP13.48□□□□□ -0.25
VEGFA-222ENST00000520948 hCG_2014768A0A024R1R8 64 aa13.48□□□□□ -0.25
VEGFA-222ENST00000520948 RPL11P62913 178 aaKnown RBP13.48□□□□□ -0.25
VEGFA-222ENST00000520948 ODF3L2Q3SX64 289 aa13.48□□□□□ -0.25
VEGFA-222ENST00000520948 C10orf113Q5VZT2 155 aa13.48□□□□□ -0.25
VEGFA-222ENST00000520948 LINC00305Q7Z4B0 112 aa13.48□□□□□ -0.25
VEGFA-222ENST00000520948 OR8I2Q8N0Y5 310 aa13.48□□□□□ -0.25
VEGFA-222ENST00000520948 SCGB1C1Q8TD33 95 aa13.48□□□□□ -0.25
VEGFA-222ENST00000520948 GPR82Q96P67 336 aa13.48□□□□□ -0.25
VEGFA-222ENST00000520948 RSG1Q9BU20 258 aa13.48□□□□□ -0.25
VEGFA-222ENST00000520948 SLC25A32Q9H2D1 315 aa13.48□□□□□ -0.25
VEGFA-222ENST00000520948 C17orf112F2Z3M2 114 aa13.47□□□□□ -0.25
VEGFA-222ENST00000520948 DNASE2O00115 360 aaPredicted RBP13.47□□□□□ -0.25
VEGFA-222ENST00000520948 MRPS12O15235 138 aaKnown RBP13.47□□□□□ -0.25
VEGFA-222ENST00000520948 ARPC5O15511 151 aa13.47□□□□□ -0.25
VEGFA-222ENST00000520948 COX7A2P2O60397 106 aa13.47□□□□□ -0.25
VEGFA-222ENST00000520948 IGHV4-30-4P0DP06 118 aa13.47□□□□□ -0.25
VEGFA-222ENST00000520948 TFPI2P48307 235 aa13.47□□□□□ -0.25
VEGFA-222ENST00000520948 MORN5Q5VZ52 161 aa13.47□□□□□ -0.25
VEGFA-222ENST00000520948 LEMD1Q68G75 181 aa13.47□□□□□ -0.25
VEGFA-222ENST00000520948 S100A7AQ86SG5 101 aa13.47□□□□□ -0.25
VEGFA-222ENST00000520948 WFDC3Q8IUB2 231 aa13.47□□□□□ -0.25
VEGFA-222ENST00000520948 OR1L4Q8NGR5 311 aa13.47□□□□□ -0.25
VEGFA-222ENST00000520948 GATAD1Q8WUU5 269 aa13.47□□□□□ -0.25
VEGFA-222ENST00000520948 PFDN5Q99471 154 aa13.47□□□□□ -0.25
VEGFA-222ENST00000520948 TM2D3Q9BRN9 247 aa13.47□□□□□ -0.25
VEGFA-222ENST00000520948 MFFQ9GZY8 342 aa13.47□□□□□ -0.25
VEGFA-222ENST00000520948 RFNGQ9Y644 331 aa13.47□□□□□ -0.25
VEGFA-222ENST00000520948 OR11H12B2RN74 326 aa13.46□□□□□ -0.25
VEGFA-222ENST00000520948 CMC4P56277 68 aaPredicted RBP13.46□□□□□ -0.25
VEGFA-222ENST00000520948 ZNF266Q14584 549 aa13.46□□□□□ -0.25
VEGFA-222ENST00000520948 ZNF345Q14585 488 aa13.46□□□□□ -0.25
VEGFA-222ENST00000520948 FAM24BQ8N5W8 94 aa13.46□□□□□ -0.25
VEGFA-222ENST00000520948 ZNF709Q8N972 641 aa13.46□□□□□ -0.25
VEGFA-222ENST00000520948 STXBP6Q8NFX7 210 aa13.46□□□□□ -0.25
VEGFA-222ENST00000520948 WFDC10AQ9H1F0 79 aa13.46□□□□□ -0.25
VEGFA-222ENST00000520948 SLC25A22Q9H936 323 aa13.46□□□□□ -0.25
VEGFA-222ENST00000520948 NRN1Q9NPD7 142 aa13.46□□□□□ -0.25
VEGFA-222ENST00000520948 KCNIP2Q9NS61 270 aa13.46□□□□□ -0.25
VEGFA-222ENST00000520948 TIMM9Q9Y5J7 89 aa13.46□□□□□ -0.25
VEGFA-222ENST00000520948 GCSAMLQ5JQS6 135 aa13.45□□□□□ -0.26
VEGFA-222ENST00000520948 LINC00322Q6ZN03 302 aaPredicted RBP13.45□□□□□ -0.26
VEGFA-222ENST00000520948 KCNRGQ8N5I3 272 aa13.45□□□□□ -0.26
VEGFA-222ENST00000520948 DEFB125Q8N687 156 aa13.45□□□□□ -0.26
VEGFA-222ENST00000520948 SEPSECSQ9HD40 501 aaKnown RBP13.45□□□□□ -0.26
VEGFA-222ENST00000520948 CYTL1Q9NRR1 136 aa13.45□□□□□ -0.26
VEGFA-222ENST00000520948 UBQLN2Q9UHD9 624 aa13.45□□□□□ -0.26
VEGFA-222ENST00000520948 RNF24Q9Y225 148 aa13.45□□□□□ -0.26
VEGFA-222ENST00000520948 STARD9Q9P2P6 4700 aa13.45□□□□□ -0.26
VEGFA-222ENST00000520948 SOCS3O14543 225 aa13.44□□□□□ -0.26
VEGFA-222ENST00000520948 TAAR5O14804 337 aa13.44□□□□□ -0.26
VEGFA-222ENST00000520948 CXCL2P19875 107 aa13.44□□□□□ -0.26
VEGFA-222ENST00000520948 GALR1P47211 349 aa13.44□□□□□ -0.26
VEGFA-222ENST00000520948 RPL7L1Q6DKI1 246 aaKnown RBP13.44□□□□□ -0.26
VEGFA-222ENST00000520948 MAP6D1Q9H9H5 199 aa13.44□□□□□ -0.26
VEGFA-222ENST00000520948 EDA2RQ9HAV5 297 aa13.44□□□□□ -0.26
VEGFA-222ENST00000520948 LYSTQ99698 3801 aa13.43□□□□□ -0.26
VEGFA-222ENST00000520948 RPL7P18124 248 aaKnown RBP13.43□□□□□ -0.26
VEGFA-222ENST00000520948 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.43□□□□□ -0.26
VEGFA-222ENST00000520948 CSMD3Q7Z407 3707 aa13.42□□□□□ -0.26
VEGFA-222ENST00000520948 A0A087X0K7 114 aa13.42□□□□□ -0.26
VEGFA-222ENST00000520948 TRAV5A0A0B4J249 113 aa13.42□□□□□ -0.26
VEGFA-222ENST00000520948 A0A0D9SG52 128 aa13.42□□□□□ -0.26
VEGFA-222ENST00000520948 C1QBP02746 253 aa13.42□□□□□ -0.26
VEGFA-222ENST00000520948 ATP6V0CP27449 155 aa13.42□□□□□ -0.26
VEGFA-222ENST00000520948 FFAR4Q5NUL3 377 aa13.42□□□□□ -0.26
VEGFA-222ENST00000520948 AKAP14Q86UN6 197 aa13.42□□□□□ -0.26
VEGFA-222ENST00000520948 PSMG3Q9BT73 122 aaPredicted RBP13.42□□□□□ -0.26
VEGFA-222ENST00000520948 DNAH1Q9P2D7 4330 aa13.42□□□□□ -0.26
VEGFA-222ENST00000520948 BORCS7-ASMTA0A0B4J1R7 106 aa13.41□□□□□ -0.26
VEGFA-222ENST00000520948 JTBO76095 146 aa13.41□□□□□ -0.26
VEGFA-222ENST00000520948 MEOX2P50222 304 aa13.41□□□□□ -0.26
VEGFA-222ENST00000520948 CD300CQ08708 224 aa13.41□□□□□ -0.26
VEGFA-222ENST00000520948 FAM78BQ5VT40 261 aa13.41□□□□□ -0.26
VEGFA-222ENST00000520948 BPIFA4PQ86YQ2 179 aa13.41□□□□□ -0.26
VEGFA-222ENST00000520948 HSD17B11Q8NBQ5 300 aa13.41□□□□□ -0.26
VEGFA-222ENST00000520948 OR2G3Q8NGZ4 309 aa13.41□□□□□ -0.26
VEGFA-222ENST00000520948 SRD5A3Q9H8P0 318 aa13.41□□□□□ -0.26
VEGFA-222ENST00000520948 RBMY1BA6NDE4 496 aaKnown RBP13.4□□□□□ -0.26
VEGFA-222ENST00000520948 RBMY1EA6NEQ0 496 aaKnown RBP13.4□□□□□ -0.26
VEGFA-222ENST00000520948 RBMY1DP0C7P1 496 aaKnown RBP13.4□□□□□ -0.26
VEGFA-222ENST00000520948 DEFB131AP59861 70 aa13.4□□□□□ -0.26
VEGFA-222ENST00000520948 SERF2P84101 59 aa13.4□□□□□ -0.26
VEGFA-222ENST00000520948 ZNF124Q15973 351 aa13.4□□□□□ -0.26
VEGFA-222ENST00000520948 SPATA31B1PQ5VZV4 182 aa13.4□□□□□ -0.26
VEGFA-222ENST00000520948 APRG1Q8IVJ8 170 aa13.4□□□□□ -0.26
VEGFA-222ENST00000520948 FAM167A-AS1Q96KT0 104 aa13.4□□□□□ -0.26
VEGFA-222ENST00000520948 ARPC5LQ9BPX5 153 aa13.4□□□□□ -0.26
VEGFA-222ENST00000520948 MRPL32Q9BYC8 188 aaKnown RBP13.4□□□□□ -0.26
VEGFA-222ENST00000520948 TUBA4BQ9H853 241 aa13.4□□□□□ -0.26
VEGFA-222ENST00000520948 BIRC6Q9NR09 4857 aa13.4□□□□□ -0.26
VEGFA-222ENST00000520948 ISLRO14498 428 aa13.39□□□□□ -0.27
VEGFA-222ENST00000520948 ZNF688P0C7X2 276 aa13.39□□□□□ -0.27
VEGFA-222ENST00000520948 IGLC2P0DOY2 106 aa13.39□□□□□ -0.27
VEGFA-222ENST00000520948 LGALSLQ3ZCW2 172 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-222ENST00000520948 MIR17HGQ75NE6 70 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms