RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 OR4C5Q8NGB2 326 aa6.93□□□□□ -1.3
HDAC3-215ENST00000519474 SFRP2Q96HF1 295 aa6.93□□□□□ -1.3
HDAC3-215ENST00000519474 OVOL2Q9BRP0 275 aa6.93□□□□□ -1.3
HDAC3-215ENST00000519474 HRH4Q9H3N8 390 aa6.93□□□□□ -1.3
HDAC3-215ENST00000519474 VSIRQ9H7M9 311 aa6.93□□□□□ -1.3
HDAC3-215ENST00000519474 ZFAND3Q9H8U3 227 aa6.93□□□□□ -1.3
HDAC3-215ENST00000519474 HEYLQ9NQ87 328 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-215ENST00000519474 ZFP30Q9Y2G7 519 aa6.93□□□□□ -1.3
HDAC3-215ENST00000519474 HSPB11Q9Y547 144 aa6.93□□□□□ -1.3
HDAC3-215ENST00000519474 A0A0B4J2A0 478 aa6.92□□□□□ -1.3
HDAC3-215ENST00000519474 C20orf202A1L168 122 aa6.92□□□□□ -1.3
HDAC3-215ENST00000519474 CEBPZOSA8MTT3 80 aa6.92□□□□□ -1.3
HDAC3-215ENST00000519474 NXPH3O95157 252 aa6.92□□□□□ -1.3
HDAC3-215ENST00000519474 IGKV1-17P01599 117 aa6.92□□□□□ -1.3
HDAC3-215ENST00000519474 CD5P06127 495 aa6.92□□□□□ -1.3
HDAC3-215ENST00000519474 SULT1A3P0DMM9 295 aa6.92□□□□□ -1.3
HDAC3-215ENST00000519474 SULT1A4P0DMN0 295 aa6.92□□□□□ -1.3
HDAC3-215ENST00000519474 ANXA3P12429 323 aa6.92□□□□□ -1.3
HDAC3-215ENST00000519474 OPRK1P41145 380 aa6.92□□□□□ -1.3
HDAC3-215ENST00000519474 CRYBA4P53673 196 aa6.92□□□□□ -1.3
HDAC3-215ENST00000519474 ODF3L2Q3SX64 289 aa6.92□□□□□ -1.3
HDAC3-215ENST00000519474 TMEM128Q5BJH2 165 aa6.92□□□□□ -1.3
HDAC3-215ENST00000519474 LGI3Q8N145 548 aa6.92□□□□□ -1.3
HDAC3-215ENST00000519474 ASB13Q8WXK3 278 aa6.92□□□□□ -1.3
HDAC3-215ENST00000519474 GGTLC1Q9BX51 225 aa6.92□□□□□ -1.3
HDAC3-215ENST00000519474 SHPKQ9UHJ6 478 aa6.92□□□□□ -1.3
HDAC3-215ENST00000519474 IGKV3-7A0A075B6H7 116 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 TRAV30A0A087WSZ9 112 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 OR4C46A6NHA9 309 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 TEX46H3BTG2 121 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 K7ERU9 68 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 PITX3O75364 302 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 OR10J4P0C629 311 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 NPPCP23582 126 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 CRYBB3P26998 211 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 S100A2P29034 98 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 FAUP35544 74 aaKnown RBP6.91□□□□□ -1.3
HDAC3-215ENST00000519474 TFPI2P48307 235 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 CMC4P56277 68 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-215ENST00000519474 TIGITQ495A1 244 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 PRSS54Q6PEW0 395 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 UQCC3Q6UW78 93 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 WFDC3Q8IUB2 231 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 APRG1Q8IVJ8 170 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 BAP18Q8IXM2 172 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 GBGT1Q8N5D6 347 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 RNASEH2CQ8TDP1 164 aaKnown RBP6.91□□□□□ -1.3
HDAC3-215ENST00000519474 ORAOV1Q8WV07 137 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 SDHCQ99643 169 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-215ENST00000519474 SLC25A21Q9BQT8 299 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-215ENST00000519474 GINS3Q9BRX5 216 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 RBKSQ9H477 322 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 SPANXA1Q9NS26 97 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 HSPB7Q9UBY9 170 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 U3KQE9 123 aa6.91□□□□□ -1.3
HDAC3-215ENST00000519474 IGHV3-66A0A0C4DH42 116 aa6.9□□□□□ -1.3
HDAC3-215ENST00000519474 TMEM218A2RU14 115 aa6.9□□□□□ -1.3
HDAC3-215ENST00000519474 FAM74A7A6NL05 159 aa6.9□□□□□ -1.3
HDAC3-215ENST00000519474 TNFRSF6BO95407 300 aa6.9□□□□□ -1.3
HDAC3-215ENST00000519474 TSPAN13O95857 204 aa6.9□□□□□ -1.3
HDAC3-215ENST00000519474 IGLC1P0CG04 106 aa6.9□□□□□ -1.3
HDAC3-215ENST00000519474 YPEL3P61236 119 aaPredicted RBP6.9□□□□□ -1.3
HDAC3-215ENST00000519474 FABP9Q0Z7S8 132 aa6.9□□□□□ -1.3
HDAC3-215ENST00000519474 RAB32Q13637 225 aa6.9□□□□□ -1.3
HDAC3-215ENST00000519474 RBMS2Q15434 407 aaKnown RBP6.9□□□□□ -1.3
HDAC3-215ENST00000519474 FAM74A3Q4VXF1 159 aa6.9□□□□□ -1.3
HDAC3-215ENST00000519474 S100A7AQ86SG5 101 aa6.9□□□□□ -1.3
HDAC3-215ENST00000519474 ZNF546Q86UE3 836 aa6.9□□□□□ -1.3
HDAC3-215ENST00000519474 SVBPQ8N300 66 aa6.9□□□□□ -1.3
HDAC3-215ENST00000519474 C15orf54Q8N8G6 183 aa6.9□□□□□ -1.3
HDAC3-215ENST00000519474 LRTM2Q8N967 370 aa6.9□□□□□ -1.3
HDAC3-215ENST00000519474 NPIPB3Q92617 1050 aa6.9□□□□□ -1.3
HDAC3-215ENST00000519474 SMIM8Q96KF7 97 aa6.9□□□□□ -1.3
HDAC3-215ENST00000519474 CACFD1Q9UGQ2 172 aa6.9□□□□□ -1.3
HDAC3-215ENST00000519474 KIR2DL5BA0A0G2JN68 375 aa6.89□□□□□ -1.31
HDAC3-215ENST00000519474 KIR2DL5BA0A0G2JPC4 375 aa6.89□□□□□ -1.31
HDAC3-215ENST00000519474 SPRY2O43597 315 aa6.89□□□□□ -1.31
HDAC3-215ENST00000519474 SFT2D2O95562 160 aa6.89□□□□□ -1.31
HDAC3-215ENST00000519474 SLC25A4P12235 298 aa6.89□□□□□ -1.31
HDAC3-215ENST00000519474 RPL35AP18077 110 aaKnown RBP6.89□□□□□ -1.31
HDAC3-215ENST00000519474 NPY1RP25929 384 aa6.89□□□□□ -1.31
HDAC3-215ENST00000519474 RND2P52198 227 aa6.89□□□□□ -1.31
HDAC3-215ENST00000519474 PTTG1IPP53801 180 aa6.89□□□□□ -1.31
HDAC3-215ENST00000519474 PAFAH1B2P68402 229 aa6.89□□□□□ -1.31
HDAC3-215ENST00000519474 PYY3Q5JQD4 70 aa6.89□□□□□ -1.31
HDAC3-215ENST00000519474 Q6ZWC4 215 aa6.89□□□□□ -1.31
HDAC3-215ENST00000519474 KIR2DL5AQ8N109 375 aa6.89□□□□□ -1.31
HDAC3-215ENST00000519474 KIR2DL5BQ8NHK3 375 aa6.89□□□□□ -1.31
HDAC3-215ENST00000519474 Q8WTZ3 238 aa6.89□□□□□ -1.31
HDAC3-215ENST00000519474 SSBP4Q9BWG4 385 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-215ENST00000519474 MS4A6AQ9H2W1 248 aa6.89□□□□□ -1.31
HDAC3-215ENST00000519474 MAP6D1Q9H9H5 199 aa6.89□□□□□ -1.31
HDAC3-215ENST00000519474 FLVCR2Q9UPI3 526 aa6.89□□□□□ -1.31
HDAC3-215ENST00000519474 TENM3Q9P273 2699 aa6.88□□□□□ -1.31
HDAC3-215ENST00000519474 A0A1W2PS18 150 aa6.88□□□□□ -1.31
HDAC3-215ENST00000519474 ADAP1O75689 374 aa6.88□□□□□ -1.31
HDAC3-215ENST00000519474 HOXB5P09067 269 aa6.88□□□□□ -1.31
HDAC3-215ENST00000519474 SLC25A6P12236 298 aa6.88□□□□□ -1.31
HDAC3-215ENST00000519474 HOXA5P20719 270 aa6.88□□□□□ -1.31
HDAC3-215ENST00000519474 FGF7P21781 194 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms