RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 HYLS1Q96M11 299 aa7.14□□□□□ -1.27
SNF8-211ENST00000512243 NPCDR1Q9BY65 106 aa7.14□□□□□ -1.27
SNF8-211ENST00000512243 PARD6GQ9BYG4 376 aaPredicted RBP7.14□□□□□ -1.27
SNF8-211ENST00000512243 TMEM231Q9H6L2 316 aa7.14□□□□□ -1.27
SNF8-211ENST00000512243 WFDC1Q9HC57 220 aa7.14□□□□□ -1.27
SNF8-211ENST00000512243 SLC45A2Q9UMX9 530 aa7.14□□□□□ -1.27
SNF8-211ENST00000512243 NOTCH1P46531 2555 aa7.13□□□□□ -1.27
SNF8-211ENST00000512243 IGHV7-4-1A0A0J9YVY3 117 aa7.13□□□□□ -1.27
SNF8-211ENST00000512243 KANTRA0A1W2PQU2 76 aa7.13□□□□□ -1.27
SNF8-211ENST00000512243 A0A1W2PS18 150 aa7.13□□□□□ -1.27
SNF8-211ENST00000512243 PFDN1O60925 122 aa7.13□□□□□ -1.27
SNF8-211ENST00000512243 FOLR2P14207 255 aa7.13□□□□□ -1.27
SNF8-211ENST00000512243 ORM2P19652 201 aa7.13□□□□□ -1.27
SNF8-211ENST00000512243 EDN2P20800 178 aa7.13□□□□□ -1.27
SNF8-211ENST00000512243 NPPCP23582 126 aa7.13□□□□□ -1.27
SNF8-211ENST00000512243 RPL29P47914 159 aaKnown RBP7.13□□□□□ -1.27
SNF8-211ENST00000512243 B2MP61769 119 aa7.13□□□□□ -1.27
SNF8-211ENST00000512243 CD300CQ08708 224 aa7.13□□□□□ -1.27
SNF8-211ENST00000512243 USF2Q15853 346 aaPredicted RBP7.13□□□□□ -1.27
SNF8-211ENST00000512243 PXDC1Q5TGL8 231 aa7.13□□□□□ -1.27
SNF8-211ENST00000512243 MIC13Q5XKP0 118 aa7.13□□□□□ -1.27
SNF8-211ENST00000512243 S100A7AQ86SG5 101 aa7.13□□□□□ -1.27
SNF8-211ENST00000512243 OR1B1Q8NGR6 318 aa7.13□□□□□ -1.27
SNF8-211ENST00000512243 ARPC5LQ9BPX5 153 aa7.13□□□□□ -1.27
SNF8-211ENST00000512243 NEURL2Q9BR09 285 aa7.13□□□□□ -1.27
SNF8-211ENST00000512243 ARL6Q9H0F7 186 aa7.13□□□□□ -1.27
SNF8-211ENST00000512243 SIGLEC8Q9NYZ4 499 aa7.13□□□□□ -1.27
SNF8-211ENST00000512243 MRPL27Q9P0M9 148 aaKnown RBP7.13□□□□□ -1.27
SNF8-211ENST00000512243 DOK5Q9P104 306 aa7.13□□□□□ -1.27
SNF8-211ENST00000512243 PXMP4Q9Y6I8 212 aa7.13□□□□□ -1.27
SNF8-211ENST00000512243 NBEAL1Q6ZS30 2694 aa7.13□□□□□ -1.27
SNF8-211ENST00000512243 IGHV3-49A0A0A0MS15 119 aa7.12□□□□□ -1.27
SNF8-211ENST00000512243 BCL2L11O43521 198 aa7.12□□□□□ -1.27
SNF8-211ENST00000512243 COX7A2P2O60397 106 aa7.12□□□□□ -1.27
SNF8-211ENST00000512243 HYPMO75409 117 aa7.12□□□□□ -1.27
SNF8-211ENST00000512243 OR5G3P0C626 314 aa7.12□□□□□ -1.27
SNF8-211ENST00000512243 C8orf88P0DMB2 117 aa7.12□□□□□ -1.27
SNF8-211ENST00000512243 CXCL2P19875 107 aa7.12□□□□□ -1.27
SNF8-211ENST00000512243 CBLN1P23435 193 aa7.12□□□□□ -1.27
SNF8-211ENST00000512243 CRYBB3P26998 211 aa7.12□□□□□ -1.27
SNF8-211ENST00000512243 PLP1P60201 277 aa7.12□□□□□ -1.27
SNF8-211ENST00000512243 IL34Q6ZMJ4 242 aa7.12□□□□□ -1.27
SNF8-211ENST00000512243 TMEM182Q6ZP80 229 aaPredicted RBP7.12□□□□□ -1.27
SNF8-211ENST00000512243 Q6ZRG5 221 aa7.12□□□□□ -1.27
SNF8-211ENST00000512243 TMUB2Q71RG4 321 aa7.12□□□□□ -1.27
SNF8-211ENST00000512243 OR1L4Q8NGR5 311 aa7.12□□□□□ -1.27
SNF8-211ENST00000512243 GRAMD2BQ96HH9 432 aa7.12□□□□□ -1.27
SNF8-211ENST00000512243 RSG1Q9BU20 258 aa7.12□□□□□ -1.27
SNF8-211ENST00000512243 SLC39A9Q9NUM3 307 aa7.12□□□□□ -1.27
SNF8-211ENST00000512243 TECRQ9NZ01 308 aaKnown RBP7.12□□□□□ -1.27
SNF8-211ENST00000512243 SMPXQ9UHP9 88 aa7.12□□□□□ -1.27
SNF8-211ENST00000512243 HIGD1AQ9Y241 93 aa7.12□□□□□ -1.27
SNF8-211ENST00000512243 IGHV3OR16-13A0A075B7E8 117 aa7.11□□□□□ -1.27
SNF8-211ENST00000512243 IGHV3-74A0A0B4J1X5 117 aa7.11□□□□□ -1.27
SNF8-211ENST00000512243 IGHV3-66A0A0C4DH42 116 aa7.11□□□□□ -1.27
SNF8-211ENST00000512243 CHEK1O14757 476 aa7.11□□□□□ -1.27
SNF8-211ENST00000512243 JTBO76095 146 aa7.11□□□□□ -1.27
SNF8-211ENST00000512243 FFAR4Q5NUL3 377 aa7.11□□□□□ -1.27
SNF8-211ENST00000512243 RPL7L1Q6DKI1 246 aaKnown RBP7.11□□□□□ -1.27
SNF8-211ENST00000512243 LCN12Q6JVE5 192 aa7.11□□□□□ -1.27
SNF8-211ENST00000512243 ADAMTSL5Q6ZMM2 481 aa7.11□□□□□ -1.27
SNF8-211ENST00000512243 HSD17B11Q8NBQ5 300 aa7.11□□□□□ -1.27
SNF8-211ENST00000512243 OR2K2Q8NGT1 345 aa7.11□□□□□ -1.27
SNF8-211ENST00000512243 PFDN5Q99471 154 aa7.11□□□□□ -1.27
SNF8-211ENST00000512243 RHPN1-AS1Q9BWJ2 59 aa7.11□□□□□ -1.27
SNF8-211ENST00000512243 ARV1Q9H2C2 271 aa7.11□□□□□ -1.27
SNF8-211ENST00000512243 VSIRQ9H7M9 311 aa7.11□□□□□ -1.27
SNF8-211ENST00000512243 MLXQ9UH92 298 aa7.11□□□□□ -1.27
SNF8-211ENST00000512243 TIMM9Q9Y5J7 89 aa7.11□□□□□ -1.27
SNF8-211ENST00000512243 G3V4G9 280 aa7.1□□□□□ -1.27
SNF8-211ENST00000512243 H3BRN7 92 aa7.1□□□□□ -1.27
SNF8-211ENST00000512243 IGLV1-51P01701 117 aa7.1□□□□□ -1.27
SNF8-211ENST00000512243 APOHP02749 345 aaPredicted RBP7.1□□□□□ -1.27
SNF8-211ENST00000512243 CD5P06127 495 aa7.1□□□□□ -1.27
SNF8-211ENST00000512243 C4BPBP20851 252 aa7.1□□□□□ -1.27
SNF8-211ENST00000512243 ATP6V0CP27449 155 aa7.1□□□□□ -1.27
SNF8-211ENST00000512243 EIF5AP63241 154 aaKnown RBP7.1□□□□□ -1.27
SNF8-211ENST00000512243 C10orf113Q5VZT2 155 aa7.1□□□□□ -1.27
SNF8-211ENST00000512243 LAMTOR1Q6IAA8 161 aa7.1□□□□□ -1.27
SNF8-211ENST00000512243 GNPNAT1Q96EK6 184 aaPredicted RBP7.1□□□□□ -1.27
SNF8-211ENST00000512243 PSMG3Q9BT73 122 aaPredicted RBP7.1□□□□□ -1.27
SNF8-211ENST00000512243 ZNF471Q9BX82 626 aaPredicted RBP7.1□□□□□ -1.27
SNF8-211ENST00000512243 SLC25A39Q9BZJ4 359 aaPredicted RBP7.1□□□□□ -1.27
SNF8-211ENST00000512243 ZMAT5Q9UDW3 170 aaKnown RBP7.1□□□□□ -1.27
SNF8-211ENST00000512243 RNF24Q9Y225 148 aa7.1□□□□□ -1.27
SNF8-211ENST00000512243 FOXI1Q12951 378 aa7.09□□□□□ -1.27
SNF8-211ENST00000512243 DEFB114Q30KQ6 69 aa7.09□□□□□ -1.27
SNF8-211ENST00000512243 ACOT6Q3I5F7 207 aaPredicted RBP7.09□□□□□ -1.27
SNF8-211ENST00000512243 LGALSLQ3ZCW2 172 aaPredicted RBP7.09□□□□□ -1.27
SNF8-211ENST00000512243 CD300EQ496F6 205 aaPredicted RBP7.09□□□□□ -1.27
SNF8-211ENST00000512243 C1orf194Q5T5A4 169 aa7.09□□□□□ -1.27
SNF8-211ENST00000512243 C16orf54Q6UWD8 224 aa7.09□□□□□ -1.27
SNF8-211ENST00000512243 RBPMS2Q6ZRY4 209 aaKnown RBP7.09□□□□□ -1.27
SNF8-211ENST00000512243 TCF24Q7RTU0 167 aa7.09□□□□□ -1.27
SNF8-211ENST00000512243 C9orf62Q8N4C0 152 aa7.09□□□□□ -1.27
SNF8-211ENST00000512243 GATAD1Q8WUU5 269 aa7.09□□□□□ -1.27
SNF8-211ENST00000512243 GLMPQ8WWB7 406 aa7.09□□□□□ -1.27
SNF8-211ENST00000512243 LINC00476Q8WZB0 136 aa7.09□□□□□ -1.27
SNF8-211ENST00000512243 UHRF2Q96PU4 802 aa7.09□□□□□ -1.27
SNF8-211ENST00000512243 RNF2Q99496 336 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms