RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 G0S2P27469 103 aa2.19□□□□□ -2.06
HMGB1P47-201ENST00000511281 RNASE4P34096 147 aaKnown RBP2.19□□□□□ -2.06
HMGB1P47-201ENST00000511281 PSMD8P48556 350 aa2.19□□□□□ -2.06
HMGB1P47-201ENST00000511281 DEFA3P59666 94 aa2.19□□□□□ -2.06
HMGB1P47-201ENST00000511281 RHEBQ15382 184 aa2.19□□□□□ -2.06
HMGB1P47-201ENST00000511281 AAED1Q7RTV5 226 aa2.19□□□□□ -2.06
HMGB1P47-201ENST00000511281 OR8D4Q8NGM9 314 aa2.19□□□□□ -2.06
HMGB1P47-201ENST00000511281 NEK7Q8TDX7 302 aa2.19□□□□□ -2.06
HMGB1P47-201ENST00000511281 HOPXQ9BPY8 73 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P47-201ENST00000511281 UTP11Q9Y3A2 253 aaKnown RBP2.19□□□□□ -2.06
HMGB1P47-201ENST00000511281 NUP188Q5SRE5 1749 aa2.19□□□□□ -2.06
HMGB1P47-201ENST00000511281 RREB1Q92766 1687 aa2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 EP400Q96L91 3159 aa2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 FBN1P35555 2871 aaKnown RBP2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 LRRC37A3O60309 1634 aa2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 ITSN1Q15811 1721 aa2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 PEAK1Q9H792 1746 aa2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 C7orf71A4D174 169 aa2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 NDUFC2O95298 119 aa2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 CRYGAP11844 174 aa2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 AKR1C3P42330 323 aa2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 ELOBQ15370 118 aa2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 TSNQ15631 228 aaKnown RBP2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 KHDC3LQ587J8 217 aa2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 AKR1C8PQ5T2L2 129 aa2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 STX12Q86Y82 276 aa2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 WFDC11Q8NEX6 87 aa2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 OR4E2Q8NGC2 313 aa2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 OR13C6PQ8NH95 151 aa2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 CST9LQ9H4G1 147 aa2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 GID8Q9NWU2 228 aa2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 NHP2Q9NX24 153 aaKnown RBP2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 CPDO75976 1380 aa2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 PIK3C2AO00443 1686 aa2.18□□□□□ -2.06
HMGB1P47-201ENST00000511281 OVOS2A0A0G2JMS6 1433 aa2.17□□□□□ -2.06
HMGB1P47-201ENST00000511281 COL5A3P25940 1745 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P47-201ENST00000511281 ECM29Q5VYK3 1845 aa2.17□□□□□ -2.06
HMGB1P47-201ENST00000511281 H7C1C5 153 aa2.17□□□□□ -2.06
HMGB1P47-201ENST00000511281 OVOL1O14753 267 aa2.17□□□□□ -2.06
HMGB1P47-201ENST00000511281 ZNF705BP0CI00 300 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P47-201ENST00000511281 GPX2P18283 190 aa2.17□□□□□ -2.06
HMGB1P47-201ENST00000511281 PHBP35232 272 aa2.17□□□□□ -2.06
HMGB1P47-201ENST00000511281 CRYBA4P53673 196 aa2.17□□□□□ -2.06
HMGB1P47-201ENST00000511281 LCN6P62502 163 aa2.17□□□□□ -2.06
HMGB1P47-201ENST00000511281 COA5Q86WW8 74 aa2.17□□□□□ -2.06
HMGB1P47-201ENST00000511281 HIST1H2BLQ99880 126 aa2.17□□□□□ -2.06
HMGB1P47-201ENST00000511281 PBOV1Q9GZY1 135 aa2.17□□□□□ -2.06
HMGB1P47-201ENST00000511281 UFC1Q9Y3C8 167 aa2.17□□□□□ -2.06
HMGB1P47-201ENST00000511281 MYOM1P52179 1685 aa2.17□□□□□ -2.06
HMGB1P47-201ENST00000511281 QRICH2Q9H0J4 1663 aa2.17□□□□□ -2.06
HMGB1P47-201ENST00000511281 CCDC88AQ3V6T2 1871 aa2.17□□□□□ -2.06
HMGB1P47-201ENST00000511281 PARP4Q9UKK3 1724 aaKnown RBP2.17□□□□□ -2.06
HMGB1P47-201ENST00000511281 NFAT5O94916 1531 aa2.17□□□□□ -2.06
HMGB1P47-201ENST00000511281 CASZ1Q86V15 1759 aa2.16□□□□□ -2.06
HMGB1P47-201ENST00000511281 G3V2T6 193 aa2.16□□□□□ -2.06
HMGB1P47-201ENST00000511281 GPX1P07203 203 aa2.16□□□□□ -2.06
HMGB1P47-201ENST00000511281 MIFP14174 115 aa2.16□□□□□ -2.06
HMGB1P47-201ENST00000511281 RHOBP62745 196 aa2.16□□□□□ -2.06
HMGB1P47-201ENST00000511281 GNG5P63218 68 aa2.16□□□□□ -2.06
HMGB1P47-201ENST00000511281 SMIM20Q8N5G0 67 aa2.16□□□□□ -2.06
HMGB1P47-201ENST00000511281 OR13D1Q8NGV5 346 aa2.16□□□□□ -2.06
HMGB1P47-201ENST00000511281 SERPINI1Q99574 410 aa2.16□□□□□ -2.06
HMGB1P47-201ENST00000511281 ACER3Q9NUN7 267 aa2.16□□□□□ -2.06
HMGB1P47-201ENST00000511281 WNK3Q9BYP7 1800 aa2.15□□□□□ -2.06
HMGB1P47-201ENST00000511281 SRCAPQ6ZRS2 3230 aa2.15□□□□□ -2.07
HMGB1P47-201ENST00000511281 J3QKU1 62 aa2.15□□□□□ -2.07
HMGB1P47-201ENST00000511281 TAS2R41P59536 307 aa2.15□□□□□ -2.07
HMGB1P47-201ENST00000511281 B2MP61769 119 aa2.15□□□□□ -2.07
HMGB1P47-201ENST00000511281 EIF5AP63241 154 aaKnown RBP2.15□□□□□ -2.07
HMGB1P47-201ENST00000511281 ZNF846Q147U1 533 aa2.15□□□□□ -2.07
HMGB1P47-201ENST00000511281 SCGB2B2Q4G0G5 96 aa2.15□□□□□ -2.07
HMGB1P47-201ENST00000511281 SPANXN5Q5MJ07 72 aa2.15□□□□□ -2.07
HMGB1P47-201ENST00000511281 GRINAQ7Z429 371 aa2.15□□□□□ -2.07
HMGB1P47-201ENST00000511281 EXOC3-AS1Q8N2X6 119 aa2.15□□□□□ -2.07
HMGB1P47-201ENST00000511281 LYSMD1Q96S90 227 aa2.15□□□□□ -2.07
HMGB1P47-201ENST00000511281 TMEM126AQ9H061 195 aa2.15□□□□□ -2.07
HMGB1P47-201ENST00000511281 CENPHQ9H3R5 247 aa2.15□□□□□ -2.07
HMGB1P47-201ENST00000511281 BIN3Q9NQY0 253 aa2.15□□□□□ -2.07
HMGB1P47-201ENST00000511281 TAS2R4Q9NYW5 299 aa2.15□□□□□ -2.07
HMGB1P47-201ENST00000511281 SMPXQ9UHP9 88 aa2.15□□□□□ -2.07
HMGB1P47-201ENST00000511281 PAPPAQ13219 1627 aa2.15□□□□□ -2.07
HMGB1P47-201ENST00000511281 RGPD5Q99666 1765 aa2.15□□□□□ -2.07
HMGB1P47-201ENST00000511281 BCL9O00512 1426 aa2.15□□□□□ -2.07
HMGB1P47-201ENST00000511281 DENND4CQ5VZ89 1909 aa2.15□□□□□ -2.07
HMGB1P47-201ENST00000511281 FREM1Q5H8C1 2179 aa2.15□□□□□ -2.07
HMGB1P47-201ENST00000511281 SBF2Q86WG5 1849 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 RGPD3A6NKT7 1758 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 AKAP12Q02952 1782 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 RGPD4Q7Z3J3 1758 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 ABCC6O95255 1503 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 IGKV1D-42A0A075B6H8 117 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 FUOMA2VDF0 154 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 C1orf196B1AJZ1 125 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 OR2T1O43869 369 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 MFSD11O43934 449 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 FABP1P07148 127 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 BAALC-AS2P0C853 105 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 FKBP2P26885 142 aaKnown RBP2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 TCTAP57738 103 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 KRTAP12-4P60329 112 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms