RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 SLC38A11Q08AI6 406 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 ZNF141Q15928 474 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 OR4C11Q6IEV9 310 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 CD164L2Q6UWJ8 174 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 HRCT1Q6UXD1 115 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 C1orf158Q8N1D5 194 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 ANKRD29Q8N6D5 301 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 SSC4DQ8WTU2 575 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 H1FXQ92522 213 aaKnown RBP3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 PLA2G12AQ9BZM1 189 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 C5orf66Q9H5L9 145 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 ZNF665Q9H7R5 613 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 ZNF286AQ9HBT8 521 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 KCNIP2Q9NS61 270 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 C21orf62Q9NYP8 219 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 C19orf25Q9UFG5 118 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 KLK13Q9UKR3 277 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 OARD1Q9Y530 152 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 KCNE3Q9Y6H6 103 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 HEATR5AQ86XA9 2040 aa3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 PRRC2BQ5JSZ5 2229 aaKnown RBP3.64□□□□□ -1.83
HMGB3P13-201ENST00000511263 NOTCH3Q9UM47 2321 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 TRBV7-7A0A0K0K1E9 115 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 CTXND1A0A1B0GTU2 59 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 FAM240AA0A1B0GVK7 77 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 A0A1W2PPK0 400 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 FAM24AA6NFZ4 105 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 A8MWV9 139 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 NTN3O00634 580 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 OVOL1O14753 267 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 CHEK1O14757 476 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 LEPROTL1O95214 131 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 IGHV4-34P06331 123 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 FRMD6-AS1P0C7T7 363 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 PIRTP0C851 137 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 HLA-DRB4P13762 266 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 RPL13AP40429 203 aaKnown RBP3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 LEPP41159 167 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 PRDX1Q06830 199 aaKnown RBP3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 UNC119Q13432 240 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 GUSBP1Q15486 140 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 LINC01620Q4KN68 170 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 LINC01545Q5VT33 79 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 CFAP126Q5VTH2 177 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 LCN12Q6JVE5 192 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 MFSD12Q6NUT3 480 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 ZNF841Q6ZN19 808 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 Q71RC1 249 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 SH2D6Q7Z4S9 175 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 CLECL1Q8IZS7 167 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 MYOZ3Q8TDC0 251 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 SSMEM1Q8WWF3 244 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 TMEM230Q96A57 120 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 TMEM222Q9H0R3 208 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 ZNF71Q9NQZ8 489 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 GNG12Q9UBI6 72 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 PKIGQ9Y2B9 76 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 HLA-DRB4X5D2U9 266 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 MYO7AQ13402 2215 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 NUP205Q92621 2012 aa3.63□□□□□ -1.83
HMGB3P13-201ENST00000511263 PLXNA4Q9HCM2 1894 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 CRYM-AS1A6NIL9 109 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 IGLL5B9A064 214 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 C9JCJ5 164 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 LMO7DNF2Z398 122 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 J3QQQ9 107 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 SSSCA1O60232 199 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 C1orf105O95561 183 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 RBP4P02753 201 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 CT62P0C5K7 136 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 SCGB1C2P0DMR2 95 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 GP9P14770 177 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 PSMB8P28062 276 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 LOXP28300 417 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 PEBP1P30086 187 aaKnown RBP3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 PFN2P35080 140 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 SSR4P51571 173 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 DLX1P56177 255 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 RPL30P62888 115 aaKnown RBP3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 SUPT4H1P63272 117 aaKnown RBP3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 HBG1P69891 147 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 HBG2P69892 147 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 EIF3IQ13347 325 aaKnown RBP3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 FAM166AQ6J272 317 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 EBLN2Q6P2I7 272 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 Q6P435 159 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 ACP7Q6ZNF0 438 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 TCF23Q7RTU1 214 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 C6orf201Q7Z4U5 140 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 LHFPL1Q86WI0 220 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 C17orf82Q86X59 251 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 C15orf53Q8NAA6 179 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 OR5C1Q8NGR4 320 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 OR52N5Q8NH56 324 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 OR2T6Q8NHC8 308 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 PIFOQ8TCI5 191 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 SAP25Q8TEE9 199 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 ZNF721Q8TF20 911 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 DNAJA3Q96EY1 480 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms