RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 HSPB11Q9Y547 144 aa13.42□□□□□ -0.26
PDLIM7-216ENST00000506537 AGRNO00468 2067 aa13.42□□□□□ -0.26
PDLIM7-216ENST00000506537 GALR1P47211 349 aa13.41□□□□□ -0.26
PDLIM7-216ENST00000506537 SNRPD3P62318 126 aaKnown RBP13.41□□□□□ -0.26
PDLIM7-216ENST00000506537 MORN5Q5VZ52 161 aa13.41□□□□□ -0.26
PDLIM7-216ENST00000506537 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.41□□□□□ -0.26
PDLIM7-216ENST00000506537 THAP6Q8TBB0 222 aa13.41□□□□□ -0.26
PDLIM7-216ENST00000506537 CHAC2Q8WUX2 184 aa13.41□□□□□ -0.26
PDLIM7-216ENST00000506537 GPR82Q96P67 336 aa13.41□□□□□ -0.26
PDLIM7-216ENST00000506537 OVOL2Q9BRP0 275 aa13.41□□□□□ -0.26
PDLIM7-216ENST00000506537 RSG1Q9BU20 258 aa13.41□□□□□ -0.26
PDLIM7-216ENST00000506537 COX7A2P2O60397 106 aa13.4□□□□□ -0.26
PDLIM7-216ENST00000506537 RPL12P30050 165 aaKnown RBP13.4□□□□□ -0.26
PDLIM7-216ENST00000506537 S100A7P31151 101 aa13.4□□□□□ -0.26
PDLIM7-216ENST00000506537 RPL29P47914 159 aaKnown RBP13.4□□□□□ -0.26
PDLIM7-216ENST00000506537 DEFB1P60022 68 aa13.4□□□□□ -0.26
PDLIM7-216ENST00000506537 DEFB135Q30KP9 77 aa13.4□□□□□ -0.26
PDLIM7-216ENST00000506537 TRPT1Q86TN4 253 aaKnown RBP13.4□□□□□ -0.26
PDLIM7-216ENST00000506537 NPCDR1Q9BY65 106 aa13.4□□□□□ -0.26
PDLIM7-216ENST00000506537 EDA2RQ9HAV5 297 aa13.4□□□□□ -0.26
PDLIM7-216ENST00000506537 SLC39A9Q9NUM3 307 aa13.4□□□□□ -0.26
PDLIM7-216ENST00000506537 UBE2CO00762 179 aa13.39□□□□□ -0.27
PDLIM7-216ENST00000506537 MRPS12O15235 138 aaKnown RBP13.39□□□□□ -0.27
PDLIM7-216ENST00000506537 GIPP09681 153 aaPredicted RBP13.39□□□□□ -0.27
PDLIM7-216ENST00000506537 PSMB3P49720 205 aa13.39□□□□□ -0.27
PDLIM7-216ENST00000506537 B2MP61769 119 aa13.39□□□□□ -0.27
PDLIM7-216ENST00000506537 Q5BKY6 102 aa13.39□□□□□ -0.27
PDLIM7-216ENST00000506537 ACTL10Q5JWF8 245 aa13.39□□□□□ -0.27
PDLIM7-216ENST00000506537 LINC00305Q7Z4B0 112 aa13.39□□□□□ -0.27
PDLIM7-216ENST00000506537 STHQ8IWL8 128 aa13.39□□□□□ -0.27
PDLIM7-216ENST00000506537 CSTL1Q9H114 145 aa13.39□□□□□ -0.27
PDLIM7-216ENST00000506537 PXMP4Q9Y6I8 212 aa13.39□□□□□ -0.27
PDLIM7-216ENST00000506537 ELOA3CA0A087WX78 387 aaPredicted RBP13.38□□□□□ -0.27
PDLIM7-216ENST00000506537 ISLRO14498 428 aa13.38□□□□□ -0.27
PDLIM7-216ENST00000506537 MPDU1O75352 247 aa13.38□□□□□ -0.27
PDLIM7-216ENST00000506537 RPL7P18124 248 aaKnown RBP13.38□□□□□ -0.27
PDLIM7-216ENST00000506537 MEOX2P50222 304 aa13.38□□□□□ -0.27
PDLIM7-216ENST00000506537 C10orf113Q5VZT2 155 aa13.38□□□□□ -0.27
PDLIM7-216ENST00000506537 Q6ZWC4 215 aa13.38□□□□□ -0.27
PDLIM7-216ENST00000506537 C20orf173Q96LM9 149 aa13.38□□□□□ -0.27
PDLIM7-216ENST00000506537 ATP5SQ99766 215 aa13.38□□□□□ -0.27
PDLIM7-216ENST00000506537 SMIM3Q9BZL3 60 aa13.38□□□□□ -0.27
PDLIM7-216ENST00000506537 WDR61Q9GZS3 305 aaKnown RBP13.38□□□□□ -0.27
PDLIM7-216ENST00000506537 GIG44P09565 113 aaPredicted RBP13.37□□□□□ -0.27
PDLIM7-216ENST00000506537 ID1P41134 155 aa13.37□□□□□ -0.27
PDLIM7-216ENST00000506537 GDF5OSQ5U4N7 250 aa13.37□□□□□ -0.27
PDLIM7-216ENST00000506537 Q6ZRG5 221 aa13.37□□□□□ -0.27
PDLIM7-216ENST00000506537 LINC00052Q96N35 136 aa13.37□□□□□ -0.27
PDLIM7-216ENST00000506537 WFDC1Q9HC57 220 aa13.37□□□□□ -0.27
PDLIM7-216ENST00000506537 DNAJC4Q9NNZ3 241 aa13.37□□□□□ -0.27
PDLIM7-216ENST00000506537 TP53TG1Q9Y2A0 90 aa13.37□□□□□ -0.27
PDLIM7-216ENST00000506537 A0A087X0K7 114 aa13.36□□□□□ -0.27
PDLIM7-216ENST00000506537 TRAV8-2A0A0B4J237 113 aa13.36□□□□□ -0.27
PDLIM7-216ENST00000506537 CA1P00915 261 aaPredicted RBP13.36□□□□□ -0.27
PDLIM7-216ENST00000506537 ATF4P18848 351 aaPredicted RBP13.36□□□□□ -0.27
PDLIM7-216ENST00000506537 C4BPBP20851 252 aa13.36□□□□□ -0.27
PDLIM7-216ENST00000506537 GCSAMLQ5JQS6 135 aa13.36□□□□□ -0.27
PDLIM7-216ENST00000506537 S100A7AQ86SG5 101 aa13.36□□□□□ -0.27
PDLIM7-216ENST00000506537 ASB13Q8WXK3 278 aa13.36□□□□□ -0.27
PDLIM7-216ENST00000506537 RNF183Q96D59 192 aa13.36□□□□□ -0.27
PDLIM7-216ENST00000506537 C16orf92Q96LL3 132 aa13.36□□□□□ -0.27
PDLIM7-216ENST00000506537 CSMD3Q7Z407 3707 aa13.36□□□□□ -0.27
PDLIM7-216ENST00000506537 TRAV5A0A0B4J249 113 aa13.35□□□□□ -0.27
PDLIM7-216ENST00000506537 H3BMM0 161 aa13.35□□□□□ -0.27
PDLIM7-216ENST00000506537 SPRY2O43597 315 aa13.35□□□□□ -0.27
PDLIM7-216ENST00000506537 HLA-DRB4P13762 266 aa13.35□□□□□ -0.27
PDLIM7-216ENST00000506537 SAMD13Q5VXD3 122 aa13.35□□□□□ -0.27
PDLIM7-216ENST00000506537 IGFL4Q6B9Z1 124 aa13.35□□□□□ -0.27
PDLIM7-216ENST00000506537 OR1L4Q8NGR5 311 aa13.35□□□□□ -0.27
PDLIM7-216ENST00000506537 PFDN5Q99471 154 aa13.35□□□□□ -0.27
PDLIM7-216ENST00000506537 HLA-DRB4X5D2U9 266 aa13.35□□□□□ -0.27
PDLIM7-216ENST00000506537 KMT2CQ8NEZ4 4911 aaKnown RBP13.35□□□□□ -0.27
PDLIM7-216ENST00000506537 STARD9Q9P2P6 4700 aa13.34□□□□□ -0.27
PDLIM7-216ENST00000506537 G3V3Q6 166 aa13.34□□□□□ -0.27
PDLIM7-216ENST00000506537 FGL1Q08830 312 aa13.34□□□□□ -0.27
PDLIM7-216ENST00000506537 RNF182Q8N6D2 247 aa13.34□□□□□ -0.27
PDLIM7-216ENST00000506537 SAV1Q9H4B6 383 aaPredicted RBP13.34□□□□□ -0.27
PDLIM7-216ENST00000506537 F6UB75 175 aa13.33□□□□□ -0.28
PDLIM7-216ENST00000506537 SNRPCP09234 159 aaKnown RBP13.33□□□□□ -0.28
PDLIM7-216ENST00000506537 FOXI2Q6ZQN5 318 aa13.33□□□□□ -0.28
PDLIM7-216ENST00000506537 RNF24Q9Y225 148 aa13.33□□□□□ -0.28
PDLIM7-216ENST00000506537 IGLC2P0DOY2 106 aa13.32□□□□□ -0.28
PDLIM7-216ENST00000506537 SPP1P10451 314 aa13.32□□□□□ -0.28
PDLIM7-216ENST00000506537 HLA-DMBP28068 263 aa13.32□□□□□ -0.28
PDLIM7-216ENST00000506537 SPATA31B1PQ5VZV4 182 aa13.32□□□□□ -0.28
PDLIM7-216ENST00000506537 MORN3Q6PF18 240 aaPredicted RBP13.32□□□□□ -0.28
PDLIM7-216ENST00000506537 BPIFA4PQ86YQ2 179 aa13.32□□□□□ -0.28
PDLIM7-216ENST00000506537 OR2T35Q8NGX2 323 aa13.32□□□□□ -0.28
PDLIM7-216ENST00000506537 GATAD1Q8WUU5 269 aa13.32□□□□□ -0.28
PDLIM7-216ENST00000506537 AQP10Q96PS8 301 aa13.32□□□□□ -0.28
PDLIM7-216ENST00000506537 RFNGQ9Y644 331 aa13.32□□□□□ -0.28
PDLIM7-216ENST00000506537 A0A0J9YX75 114 aa13.31□□□□□ -0.28
PDLIM7-216ENST00000506537 H3BQ15 152 aa13.31□□□□□ -0.28
PDLIM7-216ENST00000506537 H3BTX0 84 aa13.31□□□□□ -0.28
PDLIM7-216ENST00000506537 SLC17A3O00476 420 aa13.31□□□□□ -0.28
PDLIM7-216ENST00000506537 ZNF709Q8N972 641 aa13.31□□□□□ -0.28
PDLIM7-216ENST00000506537 PARD6GQ9BYG4 376 aaPredicted RBP13.31□□□□□ -0.28
PDLIM7-216ENST00000506537 KCNIP2Q9NS61 270 aa13.31□□□□□ -0.28
PDLIM7-216ENST00000506537 RPRMQ9NS64 109 aa13.31□□□□□ -0.28
PDLIM7-216ENST00000506537 IFNA5P01569 189 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms