RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 KPRPQ5T749 579 aaPredicted RBP8.94□□□□□ -0.98
CUX1-210ENST00000497815 FAM78BQ5VT40 261 aa8.94□□□□□ -0.98
CUX1-210ENST00000497815 SIGLEC15Q6ZMC9 328 aa8.94□□□□□ -0.98
CUX1-210ENST00000497815 C9orf62Q8N4C0 152 aa8.94□□□□□ -0.98
CUX1-210ENST00000497815 STXBP6Q8NFX7 210 aa8.94□□□□□ -0.98
CUX1-210ENST00000497815 MS4A6AQ9H2W1 248 aa8.94□□□□□ -0.98
CUX1-210ENST00000497815 ZMAT5Q9UDW3 170 aaKnown RBP8.94□□□□□ -0.98
CUX1-210ENST00000497815 DNASE2O00115 360 aaPredicted RBP8.93□□□□□ -0.98
CUX1-210ENST00000497815 CD5P06127 495 aa8.93□□□□□ -0.98
CUX1-210ENST00000497815 RAB2AP61019 212 aa8.93□□□□□ -0.98
CUX1-210ENST00000497815 PAFAH1B2P68402 229 aa8.93□□□□□ -0.98
CUX1-210ENST00000497815 SPATA31B1PQ5VZV4 182 aa8.93□□□□□ -0.98
CUX1-210ENST00000497815 OR2G3Q8NGZ4 309 aa8.93□□□□□ -0.98
CUX1-210ENST00000497815 GATAD1Q8WUU5 269 aa8.93□□□□□ -0.98
CUX1-210ENST00000497815 GNPNAT1Q96EK6 184 aaPredicted RBP8.93□□□□□ -0.98
CUX1-210ENST00000497815 SPAG8Q99932 426 aaPredicted RBP8.93□□□□□ -0.98
CUX1-210ENST00000497815 PSMG3Q9BT73 122 aaPredicted RBP8.93□□□□□ -0.98
CUX1-210ENST00000497815 SEPSECSQ9HD40 501 aaKnown RBP8.93□□□□□ -0.98
CUX1-210ENST00000497815 OR4C46A6NHA9 309 aa8.92□□□□□ -0.98
CUX1-210ENST00000497815 LCE2BO14633 110 aa8.92□□□□□ -0.98
CUX1-210ENST00000497815 EIF3GO75821 320 aaKnown RBP eCLIP8.92□□□□□ -0.98
CUX1-210ENST00000497815 SNRPCP09234 159 aaKnown RBP8.92□□□□□ -0.98
CUX1-210ENST00000497815 GALR1P47211 349 aa8.92□□□□□ -0.98
CUX1-210ENST00000497815 CD81P60033 236 aa8.92□□□□□ -0.98
CUX1-210ENST00000497815 ACOT6Q3I5F7 207 aaPredicted RBP8.92□□□□□ -0.98
CUX1-210ENST00000497815 FAM122CQ6P4D5 195 aa8.92□□□□□ -0.98
CUX1-210ENST00000497815 MIR17HGQ75NE6 70 aa8.92□□□□□ -0.98
CUX1-210ENST00000497815 AURKAIP1Q9NWT8 199 aaPredicted RBP8.92□□□□□ -0.98
CUX1-210ENST00000497815 SMAD5-AS1Q9Y6J3 95 aa8.92□□□□□ -0.98
CUX1-210ENST00000497815 CD7P09564 240 aa8.91□□□□□ -0.98
CUX1-210ENST00000497815 RPL7P18124 248 aaKnown RBP8.91□□□□□ -0.98
CUX1-210ENST00000497815 ATF4P18848 351 aaPredicted RBP8.91□□□□□ -0.98
CUX1-210ENST00000497815 M6PRP20645 277 aa8.91□□□□□ -0.98
CUX1-210ENST00000497815 GTSCR1Q86UQ5 136 aa8.91□□□□□ -0.98
CUX1-210ENST00000497815 FAM24BQ8N5W8 94 aa8.91□□□□□ -0.98
CUX1-210ENST00000497815 OR10G4Q8NGN3 311 aa8.91□□□□□ -0.98
CUX1-210ENST00000497815 OR10G9Q8NGN4 311 aa8.91□□□□□ -0.98
CUX1-210ENST00000497815 OR10G7Q8NGN6 311 aa8.91□□□□□ -0.98
CUX1-210ENST00000497815 GPR82Q96P67 336 aa8.91□□□□□ -0.98
CUX1-210ENST00000497815 NRN1Q9NPD7 142 aa8.91□□□□□ -0.98
CUX1-210ENST00000497815 UBQLN2Q9UHD9 624 aa8.91□□□□□ -0.98
CUX1-210ENST00000497815 FUT9Q9Y231 359 aa8.91□□□□□ -0.98
CUX1-210ENST00000497815 A0A1W2PPV4 95 aa8.9□□□□□ -0.98
CUX1-210ENST00000497815 H3BTX0 84 aa8.9□□□□□ -0.98
CUX1-210ENST00000497815 BOLA2-SMG1P6H3BVE0 249 aa8.9□□□□□ -0.98
CUX1-210ENST00000497815 HMGB3O15347 200 aaKnown RBP8.9□□□□□ -0.98
CUX1-210ENST00000497815 SPP1P10451 314 aa8.9□□□□□ -0.98
CUX1-210ENST00000497815 TPT1P13693 172 aaKnown RBP8.9□□□□□ -0.98
CUX1-210ENST00000497815 RHOBP62745 196 aa8.9□□□□□ -0.98
CUX1-210ENST00000497815 EIF5AP63241 154 aaKnown RBP8.9□□□□□ -0.98
CUX1-210ENST00000497815 SERF2P84101 59 aa8.9□□□□□ -0.98
CUX1-210ENST00000497815 BPIFA4PQ86YQ2 179 aa8.9□□□□□ -0.98
CUX1-210ENST00000497815 BAP18Q8IXM2 172 aa8.9□□□□□ -0.98
CUX1-210ENST00000497815 SLC25A2Q9BXI2 301 aa8.9□□□□□ -0.98
CUX1-210ENST00000497815 MRPL32Q9BYC8 188 aaKnown RBP8.9□□□□□ -0.98
CUX1-210ENST00000497815 RNF24Q9Y225 148 aa8.9□□□□□ -0.98
CUX1-210ENST00000497815 K7EQG2 157 aa8.89□□□□□ -0.99
CUX1-210ENST00000497815 MBP02144 154 aa8.89□□□□□ -0.99
CUX1-210ENST00000497815 PYYP10082 97 aa8.89□□□□□ -0.99
CUX1-210ENST00000497815 C4BPBP20851 252 aa8.89□□□□□ -0.99
CUX1-210ENST00000497815 DEFA6Q01524 100 aa8.89□□□□□ -0.99
CUX1-210ENST00000497815 TMEM41BQ5BJD5 291 aa8.89□□□□□ -0.99
CUX1-210ENST00000497815 AKR1C8PQ5T2L2 129 aa8.89□□□□□ -0.99
CUX1-210ENST00000497815 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.89□□□□□ -0.99
CUX1-210ENST00000497815 DCANP1Q8TF63 244 aa8.89□□□□□ -0.99
CUX1-210ENST00000497815 WFDC10AQ9H1F0 79 aa8.89□□□□□ -0.99
CUX1-210ENST00000497815 RPRMQ9NS64 109 aa8.89□□□□□ -0.99
CUX1-210ENST00000497815 MGAM2Q2M2H8 2515 aa8.89□□□□□ -0.99
CUX1-210ENST00000497815 CMYA5Q8N3K9 4069 aa8.89□□□□□ -0.99
CUX1-210ENST00000497815 TRAV2A0A0B4J234 112 aa8.88□□□□□ -0.99
CUX1-210ENST00000497815 MRPS12O15235 138 aaKnown RBP8.88□□□□□ -0.99
CUX1-210ENST00000497815 OR7C2O60412 319 aa8.88□□□□□ -0.99
CUX1-210ENST00000497815 ZNF688P0C7X2 276 aa8.88□□□□□ -0.99
CUX1-210ENST00000497815 CDC34P49427 236 aaPredicted RBP8.88□□□□□ -0.99
CUX1-210ENST00000497815 IGFL4Q6B9Z1 124 aa8.88□□□□□ -0.99
CUX1-210ENST00000497815 SLC51BQ86UW2 128 aa8.88□□□□□ -0.99
CUX1-210ENST00000497815 RPP25LQ8N5L8 163 aaKnown RBP8.88□□□□□ -0.99
CUX1-210ENST00000497815 STOML3Q8TAV4 291 aa8.88□□□□□ -0.99
CUX1-210ENST00000497815 LRRC20Q8TCA0 184 aa8.88□□□□□ -0.99
CUX1-210ENST00000497815 TMED6Q8WW62 240 aa8.88□□□□□ -0.99
CUX1-210ENST00000497815 FAM167A-AS1Q96KT0 104 aa8.88□□□□□ -0.99
CUX1-210ENST00000497815 C16orf92Q96LL3 132 aa8.88□□□□□ -0.99
CUX1-210ENST00000497815 C17orf77Q96MU5 243 aa8.88□□□□□ -0.99
CUX1-210ENST00000497815 NOTCH3Q9UM47 2321 aa8.87□□□□□ -0.99
CUX1-210ENST00000497815 OR11H12B2RN74 326 aa8.87□□□□□ -0.99
CUX1-210ENST00000497815 H3BQ15 152 aa8.87□□□□□ -0.99
CUX1-210ENST00000497815 K7EIL1 84 aa8.87□□□□□ -0.99
CUX1-210ENST00000497815 OR10J4P0C629 311 aa8.87□□□□□ -0.99
CUX1-210ENST00000497815 SEC11BP0C7V7 166 aa8.87□□□□□ -0.99
CUX1-210ENST00000497815 IGLC2P0DOY2 106 aa8.87□□□□□ -0.99
CUX1-210ENST00000497815 TAS2R45P59539 299 aa8.87□□□□□ -0.99
CUX1-210ENST00000497815 DEFB131AP59861 70 aa8.87□□□□□ -0.99
CUX1-210ENST00000497815 ODF3L2Q3SX64 289 aa8.87□□□□□ -0.99
CUX1-210ENST00000497815 KHDC3LQ587J8 217 aa8.87□□□□□ -0.99
CUX1-210ENST00000497815 DEFB121Q5J5C9 76 aa8.87□□□□□ -0.99
CUX1-210ENST00000497815 PSMG4Q5JS54 123 aa8.87□□□□□ -0.99
CUX1-210ENST00000497815 APRG1Q8IVJ8 170 aa8.87□□□□□ -0.99
CUX1-210ENST00000497815 Q8N1Y9 231 aa8.87□□□□□ -0.99
CUX1-210ENST00000497815 DEFB125Q8N687 156 aa8.87□□□□□ -0.99
CUX1-210ENST00000497815 BLNKQ8WV28 456 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms