RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 SHANK2-AS3Q9BTD1 123 aa9.06□□□□□ -0.96
HSPG2-212ENST00000493940 SLC25A39Q9BZJ4 359 aaPredicted RBP9.06□□□□□ -0.96
HSPG2-212ENST00000493940 PLA2G2EQ9NZK7 142 aa9.06□□□□□ -0.96
HSPG2-212ENST00000493940 HERC2O95714 4834 aa9.05□□□□□ -0.96
HSPG2-212ENST00000493940 FAM24AA6NFZ4 105 aa9.05□□□□□ -0.96
HSPG2-212ENST00000493940 A8MTW9 85 aa9.05□□□□□ -0.96
HSPG2-212ENST00000493940 ISLRO14498 428 aa9.05□□□□□ -0.96
HSPG2-212ENST00000493940 TSC22D2O75157 780 aa9.05□□□□□ -0.96
HSPG2-212ENST00000493940 IL5P05113 134 aa9.05□□□□□ -0.96
HSPG2-212ENST00000493940 SNRPCP09234 159 aaKnown RBP9.05□□□□□ -0.96
HSPG2-212ENST00000493940 H2AFB2P0C5Z0 115 aa9.05□□□□□ -0.96
HSPG2-212ENST00000493940 LINC00869P0C866 280 aa9.05□□□□□ -0.96
HSPG2-212ENST00000493940 TAS2R30P59541 319 aa9.05□□□□□ -0.96
HSPG2-212ENST00000493940 PLP1P60201 277 aa9.05□□□□□ -0.96
HSPG2-212ENST00000493940 C12orf74Q32Q52 190 aa9.05□□□□□ -0.96
HSPG2-212ENST00000493940 TMEM41BQ5BJD5 291 aa9.05□□□□□ -0.96
HSPG2-212ENST00000493940 ZNF705AQ6ZN79 300 aaPredicted RBP9.05□□□□□ -0.96
HSPG2-212ENST00000493940 FOXI2Q6ZQN5 318 aa9.05□□□□□ -0.96
HSPG2-212ENST00000493940 C12orf45Q8N5I9 185 aaPredicted RBP9.05□□□□□ -0.96
HSPG2-212ENST00000493940 OR4B1Q8NGF8 309 aa9.05□□□□□ -0.96
HSPG2-212ENST00000493940 CCDC32Q9BV29 185 aa9.05□□□□□ -0.96
HSPG2-212ENST00000493940 NPVFQ9HCQ7 196 aa9.05□□□□□ -0.96
HSPG2-212ENST00000493940 APLNQ9ULZ1 77 aa9.05□□□□□ -0.96
HSPG2-212ENST00000493940 SLC45A2Q9UMX9 530 aa9.05□□□□□ -0.96
HSPG2-212ENST00000493940 KLK5Q9Y337 293 aaPredicted RBP9.05□□□□□ -0.96
HSPG2-212ENST00000493940 LSM5Q9Y4Y9 91 aaKnown RBP9.05□□□□□ -0.96
HSPG2-212ENST00000493940 ZNF705FA8MVS1 300 aaPredicted RBP9.04□□□□□ -0.96
HSPG2-212ENST00000493940 FAM25EA8MYX2 175 aa9.04□□□□□ -0.96
HSPG2-212ENST00000493940 CFDP00746 253 aaPredicted RBP9.04□□□□□ -0.96
HSPG2-212ENST00000493940 NUP62P37198 522 aaPredicted RBP9.04□□□□□ -0.96
HSPG2-212ENST00000493940 ID1P41134 155 aa9.04□□□□□ -0.96
HSPG2-212ENST00000493940 OR10P1Q8NGE3 313 aa9.04□□□□□ -0.96
HSPG2-212ENST00000493940 C16orf92Q96LL3 132 aa9.04□□□□□ -0.96
HSPG2-212ENST00000493940 CLUHP3Q96NS8 147 aa9.04□□□□□ -0.96
HSPG2-212ENST00000493940 MGST2Q99735 147 aa9.04□□□□□ -0.96
HSPG2-212ENST00000493940 TMEM147Q9BVK8 224 aa9.04□□□□□ -0.96
HSPG2-212ENST00000493940 HRH4Q9H3N8 390 aa9.04□□□□□ -0.96
HSPG2-212ENST00000493940 DNAH17Q9UFH2 4485 aa9.03□□□□□ -0.96
HSPG2-212ENST00000493940 IGSF23A1L1A6 192 aa9.03□□□□□ -0.96
HSPG2-212ENST00000493940 FNDC10F2Z333 226 aa9.03□□□□□ -0.96
HSPG2-212ENST00000493940 AGPAT2O15120 278 aa9.03□□□□□ -0.96
HSPG2-212ENST00000493940 HYPMO75409 117 aa9.03□□□□□ -0.96
HSPG2-212ENST00000493940 CST7O76096 145 aa9.03□□□□□ -0.96
HSPG2-212ENST00000493940 GALR1P47211 349 aa9.03□□□□□ -0.96
HSPG2-212ENST00000493940 TMEM37Q8WXS4 190 aa9.03□□□□□ -0.96
HSPG2-212ENST00000493940 C2orf50Q96LR7 162 aa9.03□□□□□ -0.96
HSPG2-212ENST00000493940 MFFQ9GZY8 342 aa9.03□□□□□ -0.96
HSPG2-212ENST00000493940 ARL6Q9H0F7 186 aa9.03□□□□□ -0.96
HSPG2-212ENST00000493940 PFDN2Q9UHV9 154 aa9.03□□□□□ -0.96
HSPG2-212ENST00000493940 HIGD1AQ9Y241 93 aa9.03□□□□□ -0.96
HSPG2-212ENST00000493940 NACAE9PAV3 2078 aa9.03□□□□□ -0.96
HSPG2-212ENST00000493940 FAT2Q9NYQ8 4349 aa9.02□□□□□ -0.96
HSPG2-212ENST00000493940 IGHV3OR16-12A0A075B7B8 117 aa9.02□□□□□ -0.97
HSPG2-212ENST00000493940 FAM240BA0A1B0GVZ2 78 aa9.02□□□□□ -0.97
HSPG2-212ENST00000493940 C5orf51A6NDU8 294 aa9.02□□□□□ -0.97
HSPG2-212ENST00000493940 IGLL5B9A064 214 aa9.02□□□□□ -0.97
HSPG2-212ENST00000493940 CRXO43186 299 aaPredicted RBP9.02□□□□□ -0.97
HSPG2-212ENST00000493940 SIX6O95475 246 aa9.02□□□□□ -0.97
HSPG2-212ENST00000493940 OR5G3P0C626 314 aa9.02□□□□□ -0.97
HSPG2-212ENST00000493940 PSG9Q00887 426 aa9.02□□□□□ -0.97
HSPG2-212ENST00000493940 FGL1Q08830 312 aa9.02□□□□□ -0.97
HSPG2-212ENST00000493940 ASAH1Q13510 395 aa9.02□□□□□ -0.97
HSPG2-212ENST00000493940 RAB32Q13637 225 aa9.02□□□□□ -0.97
HSPG2-212ENST00000493940 LGALS9CQ6DKI2 356 aa9.02□□□□□ -0.97
HSPG2-212ENST00000493940 TEPPQ6URK8 271 aa9.02□□□□□ -0.97
HSPG2-212ENST00000493940 ARV1Q9H2C2 271 aa9.02□□□□□ -0.97
HSPG2-212ENST00000493940 BATF3Q9NR55 127 aa9.02□□□□□ -0.97
HSPG2-212ENST00000493940 CNN1P51911 297 aaKnown RBP9.01□□□□□ -0.97
HSPG2-212ENST00000493940 NUTF2P61970 127 aaKnown RBP9.01□□□□□ -0.97
HSPG2-212ENST00000493940 SELENOTP62341 195 aa9.01□□□□□ -0.97
HSPG2-212ENST00000493940 LINC00299Q6ZSB3 139 aa9.01□□□□□ -0.97
HSPG2-212ENST00000493940 OR11H7Q8NGC8 314 aa9.01□□□□□ -0.97
HSPG2-212ENST00000493940 C2CD4CQ8TF44 421 aa9.01□□□□□ -0.97
HSPG2-212ENST00000493940 NEU1Q99519 415 aa9.01□□□□□ -0.97
HSPG2-212ENST00000493940 C1QTNF4Q9BXJ3 329 aa9.01□□□□□ -0.97
HSPG2-212ENST00000493940 RPRMQ9NS64 109 aa9.01□□□□□ -0.97
HSPG2-212ENST00000493940 TRAV5A0A0B4J249 113 aa9□□□□□ -0.97
HSPG2-212ENST00000493940 H3BTX0 84 aa9□□□□□ -0.97
HSPG2-212ENST00000493940 M0R2Z0 102 aa9□□□□□ -0.97
HSPG2-212ENST00000493940 UPK1BO75841 260 aa9□□□□□ -0.97
HSPG2-212ENST00000493940 CXCL3P19876 107 aa9□□□□□ -0.97
HSPG2-212ENST00000493940 MEOX2P50222 304 aa9□□□□□ -0.97
HSPG2-212ENST00000493940 EMP1P54849 157 aa9□□□□□ -0.97
HSPG2-212ENST00000493940 RAP2BP61225 183 aa9□□□□□ -0.97
HSPG2-212ENST00000493940 MIC13Q5XKP0 118 aa9□□□□□ -0.97
HSPG2-212ENST00000493940 EBLN2Q6P2I7 272 aa9□□□□□ -0.97
HSPG2-212ENST00000493940 LINC00305Q7Z4B0 112 aa9□□□□□ -0.97
HSPG2-212ENST00000493940 GGACTQ9BVM4 153 aa9□□□□□ -0.97
HSPG2-212ENST00000493940 MGAT4CQ9UBM8 478 aa9□□□□□ -0.97
HSPG2-212ENST00000493940 A0A087X0K7 114 aa8.99□□□□□ -0.97
HSPG2-212ENST00000493940 PRAC2D3DTV9 90 aa8.99□□□□□ -0.97
HSPG2-212ENST00000493940 H0YIZ8 118 aa8.99□□□□□ -0.97
HSPG2-212ENST00000493940 H3BQ15 152 aa8.99□□□□□ -0.97
HSPG2-212ENST00000493940 L7N2F9 121 aa8.99□□□□□ -0.97
HSPG2-212ENST00000493940 SLC17A3O00476 420 aa8.99□□□□□ -0.97
HSPG2-212ENST00000493940 GOSR2O14653 212 aa8.99□□□□□ -0.97
HSPG2-212ENST00000493940 BCAP31P51572 246 aa8.99□□□□□ -0.97
HSPG2-212ENST00000493940 CAV2P51636 162 aa8.99□□□□□ -0.97
HSPG2-212ENST00000493940 VAMP2P63027 116 aa8.99□□□□□ -0.97
HSPG2-212ENST00000493940 ZNF846Q147U1 533 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms